Archive 4 checkpoints (1-4)

paper-releases/pbisc-diffusion/updates/20261013T115045Z-figure-strengthening-154/diffusion/dataset/server_1/model8/presentations/2026-09-30--paper-summary--r00/data/strengthening_20261013/disease_metrics/source_snapshot/plans/paired_finetune_intradataset_20260927/scores_contrast/imperial_eskd/scsemi_cv_20261002/pooled/rbo.csv

@@ -0,0 +1,11 @@
+dataset,design,unit,arm,predictor,celltype,p,rbo_ext_t_desc,rbo_ext_t_asc,rbo_ext_mean_up_down,pred_defined,len_obs,len_pred
+imperial_eskd,scored,scsemi_cv_20261002/pooled,scsemi__raw,generated:scsemi__raw,T cell,0.98,0.22095656565040028,0.13386456249441317,0.17741056407240674,True,5755,4088
+imperial_eskd,scored,scsemi_cv_20261002/pooled,scsemi__raw,broadcast:conditions_pooled_raw.npz@7fbfb797,T cell,0.98,0.18575025132194545,0.22974251893661754,0.2077463851292815,True,5755,5823
+imperial_eskd,scored,scsemi_cv_20261002/pooled,scsemi__raw,generated:scsemi__raw,B cell,0.98,0.22093473663725405,0.024832435397418366,0.1228835860173362,True,5645,2919
+imperial_eskd,scored,scsemi_cv_20261002/pooled,scsemi__raw,broadcast:conditions_pooled_raw.npz@7fbfb797,B cell,0.98,0.16594807245181317,0.19845485793489823,0.1822014651933557,True,5645,5823
+imperial_eskd,scored,scsemi_cv_20261002/pooled,scsemi__raw,generated:scsemi__raw,Monocyte,0.98,0.22035340344425627,0.038196628406101614,0.12927501592517895,True,5631,2297
+imperial_eskd,scored,scsemi_cv_20261002/pooled,scsemi__raw,broadcast:conditions_pooled_raw.npz@7fbfb797,Monocyte,0.98,0.18767760214073972,0.07101896399052536,0.12934828306563254,True,5631,5823
+imperial_eskd,scored,scsemi_cv_20261002/pooled,scsemi__raw,generated:scsemi__raw,NK cell,0.98,0.4232390880355052,0.23911876942088214,0.33117892872819366,True,5591,3323
+imperial_eskd,scored,scsemi_cv_20261002/pooled,scsemi__raw,broadcast:conditions_pooled_raw.npz@7fbfb797,NK cell,0.98,0.17629725759418896,0.2123595577649776,0.1943284076795833,True,5591,5823
+imperial_eskd,scored,scsemi_cv_20261002/pooled,scsemi__raw,generated:scsemi__raw,DC,0.98,0.3020095738556578,0.14294630379178747,0.22247793882372263,True,5437,1818
+imperial_eskd,scored,scsemi_cv_20261002/pooled,scsemi__raw,broadcast:conditions_pooled_raw.npz@7fbfb797,DC,0.98,0.17079554777486666,0.11450591157079283,0.14265072967282974,True,5437,5823

paper-releases/pbisc-diffusion/updates/20261013T115045Z-figure-strengthening-154/diffusion/dataset/server_1/model8/presentations/2026-09-30--paper-summary--r00/data/strengthening_20261013/disease_metrics/source_snapshot/plans/paired_finetune_intradataset_20260927/scores_contrast/ji2025_chili/pooled/cat.csv

@@ -0,0 +1,361 @@
+dataset,design,unit,arm,predictor,celltype,k,k_eff,cat_same_sign,cat_any_sign,chance_same_sign,chance_any_sign,G_both,pred_defined,n_tested_obs,n_tested_pred
+ji2025_chili,pooled,pooled,pseudo_full__cal,generated:pseudo_full__cal,T cell,10,10,0.0,0.0,0.0011851149561507466,0.002370229912301493,4219,True,5696,4222
+ji2025_chili,pooled,pooled,pseudo_full__cal,generated:pseudo_full__cal,T cell,20,20,0.0,0.0,0.002370229912301493,0.004740459824602986,4219,True,5696,4222
+ji2025_chili,pooled,pooled,pseudo_full__cal,generated:pseudo_full__cal,T cell,50,50,0.0,0.02,0.005925574780753733,0.011851149561507466,4219,True,5696,4222
+ji2025_chili,pooled,pooled,pseudo_full__cal,generated:pseudo_full__cal,T cell,100,100,0.03,0.04,0.011851149561507466,0.02370229912301493,4219,True,5696,4222
+ji2025_chili,pooled,pooled,pseudo_full__cal,generated:pseudo_full__cal,T cell,200,200,0.05,0.06,0.02370229912301493,0.04740459824602986,4219,True,5696,4222
+ji2025_chili,pooled,pooled,pseudo_full__cal,generated:pseudo_full__cal,T cell,500,500,0.084,0.102,0.05925574780753733,0.11851149561507467,4219,True,5696,4222
+ji2025_chili,pooled,pooled,pseudo_full__cal,broadcast:conditions_pooled_cal.npz@b0274507,T cell,10,10,0.0,0.0,0.0009094216078574026,0.0018188432157148053,5498,True,5696,5541
+ji2025_chili,pooled,pooled,pseudo_full__cal,broadcast:conditions_pooled_cal.npz@b0274507,T cell,20,20,0.0,0.0,0.0018188432157148053,0.0036376864314296106,5498,True,5696,5541
+ji2025_chili,pooled,pooled,pseudo_full__cal,broadcast:conditions_pooled_cal.npz@b0274507,T cell,50,50,0.02,0.02,0.004547108039287013,0.009094216078574026,5498,True,5696,5541
+ji2025_chili,pooled,pooled,pseudo_full__cal,broadcast:conditions_pooled_cal.npz@b0274507,T cell,100,100,0.08,0.08,0.009094216078574026,0.018188432157148052,5498,True,5696,5541
+ji2025_chili,pooled,pooled,pseudo_full__cal,broadcast:conditions_pooled_cal.npz@b0274507,T cell,200,200,0.115,0.12,0.018188432157148052,0.036376864314296105,5498,True,5696,5541
+ji2025_chili,pooled,pooled,pseudo_full__cal,broadcast:conditions_pooled_cal.npz@b0274507,T cell,500,500,0.17,0.188,0.045471080392870136,0.09094216078574027,5498,True,5696,5541
+ji2025_chili,pooled,pooled,pseudo_full__cal,generated:pseudo_full__cal,B cell,10,10,0.0,0.0,0.0017059024223814397,0.0034118048447628795,2931,True,5418,2935
+ji2025_chili,pooled,pooled,pseudo_full__cal,generated:pseudo_full__cal,B cell,20,20,0.0,0.0,0.0034118048447628795,0.006823609689525759,2931,True,5418,2935
+ji2025_chili,pooled,pooled,pseudo_full__cal,generated:pseudo_full__cal,B cell,50,50,0.0,0.0,0.008529512111907198,0.017059024223814397,2931,True,5418,2935
+ji2025_chili,pooled,pooled,pseudo_full__cal,generated:pseudo_full__cal,B cell,100,100,0.01,0.01,0.017059024223814397,0.03411804844762879,2931,True,5418,2935
+ji2025_chili,pooled,pooled,pseudo_full__cal,generated:pseudo_full__cal,B cell,200,200,0.05,0.07,0.03411804844762879,0.06823609689525759,2931,True,5418,2935
+ji2025_chili,pooled,pooled,pseudo_full__cal,generated:pseudo_full__cal,B cell,500,500,0.12,0.164,0.08529512111907199,0.17059024223814398,2931,True,5418,2935
+ji2025_chili,pooled,pooled,pseudo_full__cal,broadcast:conditions_pooled_cal.npz@b0274507,B cell,10,10,0.0,0.0,0.000949667616334283,0.001899335232668566,5265,True,5418,5541
+ji2025_chili,pooled,pooled,pseudo_full__cal,broadcast:conditions_pooled_cal.npz@b0274507,B cell,20,20,0.0,0.0,0.001899335232668566,0.003798670465337132,5265,True,5418,5541
+ji2025_chili,pooled,pooled,pseudo_full__cal,broadcast:conditions_pooled_cal.npz@b0274507,B cell,50,50,0.0,0.02,0.004748338081671415,0.00949667616334283,5265,True,5418,5541
+ji2025_chili,pooled,pooled,pseudo_full__cal,broadcast:conditions_pooled_cal.npz@b0274507,B cell,100,100,0.01,0.03,0.00949667616334283,0.01899335232668566,5265,True,5418,5541
+ji2025_chili,pooled,pooled,pseudo_full__cal,broadcast:conditions_pooled_cal.npz@b0274507,B cell,200,200,0.045,0.09,0.01899335232668566,0.03798670465337132,5265,True,5418,5541
+ji2025_chili,pooled,pooled,pseudo_full__cal,broadcast:conditions_pooled_cal.npz@b0274507,B cell,500,500,0.072,0.138,0.04748338081671415,0.0949667616334283,5265,True,5418,5541
+ji2025_chili,pooled,pooled,pseudo_full__cal,generated:pseudo_full__cal,Monocyte,10,10,0.0,0.0,0.0014766686355581807,0.0029533372711163615,3386,True,5699,3386
+ji2025_chili,pooled,pooled,pseudo_full__cal,generated:pseudo_full__cal,Monocyte,20,20,0.05,0.05,0.0029533372711163615,0.005906674542232723,3386,True,5699,3386
+ji2025_chili,pooled,pooled,pseudo_full__cal,generated:pseudo_full__cal,Monocyte,50,50,0.02,0.02,0.007383343177790904,0.014766686355581808,3386,True,5699,3386
+ji2025_chili,pooled,pooled,pseudo_full__cal,generated:pseudo_full__cal,Monocyte,100,100,0.08,0.08,0.014766686355581808,0.029533372711163616,3386,True,5699,3386
+ji2025_chili,pooled,pooled,pseudo_full__cal,generated:pseudo_full__cal,Monocyte,200,200,0.085,0.09,0.029533372711163616,0.05906674542232723,3386,True,5699,3386
+ji2025_chili,pooled,pooled,pseudo_full__cal,generated:pseudo_full__cal,Monocyte,500,500,0.142,0.166,0.07383343177790903,0.14766686355581807,3386,True,5699,3386
+ji2025_chili,pooled,pooled,pseudo_full__cal,broadcast:conditions_pooled_cal.npz@b0274507,Monocyte,10,10,0.0,0.0,0.0009087604507451836,0.0018175209014903672,5502,True,5699,5541
+ji2025_chili,pooled,pooled,pseudo_full__cal,broadcast:conditions_pooled_cal.npz@b0274507,Monocyte,20,20,0.05,0.05,0.0018175209014903672,0.0036350418029807343,5502,True,5699,5541
+ji2025_chili,pooled,pooled,pseudo_full__cal,broadcast:conditions_pooled_cal.npz@b0274507,Monocyte,50,50,0.1,0.1,0.0045438022537259174,0.009087604507451835,5502,True,5699,5541
+ji2025_chili,pooled,pooled,pseudo_full__cal,broadcast:conditions_pooled_cal.npz@b0274507,Monocyte,100,100,0.1,0.1,0.009087604507451835,0.01817520901490367,5502,True,5699,5541
+ji2025_chili,pooled,pooled,pseudo_full__cal,broadcast:conditions_pooled_cal.npz@b0274507,Monocyte,200,200,0.1,0.1,0.01817520901490367,0.03635041802980734,5502,True,5699,5541
+ji2025_chili,pooled,pooled,pseudo_full__cal,broadcast:conditions_pooled_cal.npz@b0274507,Monocyte,500,500,0.164,0.17,0.045438022537259176,0.09087604507451835,5502,True,5699,5541
+ji2025_chili,pooled,pooled,pseudo_full__cal,generated:pseudo_full__cal,NK cell,10,10,0.0,0.0,0.0021777003484320556,0.004355400696864111,2296,True,5516,2296
+ji2025_chili,pooled,pooled,pseudo_full__cal,generated:pseudo_full__cal,NK cell,20,20,0.0,0.0,0.004355400696864111,0.008710801393728223,2296,True,5516,2296
+ji2025_chili,pooled,pooled,pseudo_full__cal,generated:pseudo_full__cal,NK cell,50,50,0.0,0.0,0.01088850174216028,0.02177700348432056,2296,True,5516,2296
+ji2025_chili,pooled,pooled,pseudo_full__cal,generated:pseudo_full__cal,NK cell,100,100,0.01,0.01,0.02177700348432056,0.04355400696864112,2296,True,5516,2296
+ji2025_chili,pooled,pooled,pseudo_full__cal,generated:pseudo_full__cal,NK cell,200,200,0.045,0.06,0.04355400696864112,0.08710801393728224,2296,True,5516,2296
+ji2025_chili,pooled,pooled,pseudo_full__cal,generated:pseudo_full__cal,NK cell,500,500,0.08,0.106,0.10888501742160278,0.21777003484320556,2296,True,5516,2296
+ji2025_chili,pooled,pooled,pseudo_full__cal,broadcast:conditions_pooled_cal.npz@b0274507,NK cell,10,10,0.0,0.0,0.0009338812103100486,0.0018677624206200972,5354,True,5516,5541
+ji2025_chili,pooled,pooled,pseudo_full__cal,broadcast:conditions_pooled_cal.npz@b0274507,NK cell,20,20,0.0,0.0,0.0018677624206200972,0.0037355248412401943,5354,True,5516,5541
+ji2025_chili,pooled,pooled,pseudo_full__cal,broadcast:conditions_pooled_cal.npz@b0274507,NK cell,50,50,0.02,0.02,0.0046694060515502425,0.009338812103100485,5354,True,5516,5541
+ji2025_chili,pooled,pooled,pseudo_full__cal,broadcast:conditions_pooled_cal.npz@b0274507,NK cell,100,100,0.04,0.04,0.009338812103100485,0.01867762420620097,5354,True,5516,5541
+ji2025_chili,pooled,pooled,pseudo_full__cal,broadcast:conditions_pooled_cal.npz@b0274507,NK cell,200,200,0.05,0.055,0.01867762420620097,0.03735524841240194,5354,True,5516,5541
+ji2025_chili,pooled,pooled,pseudo_full__cal,broadcast:conditions_pooled_cal.npz@b0274507,NK cell,500,500,0.078,0.098,0.04669406051550243,0.09338812103100486,5354,True,5516,5541
+ji2025_chili,pooled,pooled,pseudo_full__cal,generated:pseudo_full__cal,DC,10,10,0.0,0.0,0.001877581674802854,0.003755163349605708,2663,True,5168,2666
+ji2025_chili,pooled,pooled,pseudo_full__cal,generated:pseudo_full__cal,DC,20,20,0.0,0.0,0.003755163349605708,0.007510326699211416,2663,True,5168,2666
+ji2025_chili,pooled,pooled,pseudo_full__cal,generated:pseudo_full__cal,DC,50,50,0.02,0.02,0.00938790837401427,0.01877581674802854,2663,True,5168,2666
+ji2025_chili,pooled,pooled,pseudo_full__cal,generated:pseudo_full__cal,DC,100,100,0.02,0.02,0.01877581674802854,0.03755163349605708,2663,True,5168,2666
+ji2025_chili,pooled,pooled,pseudo_full__cal,generated:pseudo_full__cal,DC,200,200,0.03,0.04,0.03755163349605708,0.07510326699211416,2663,True,5168,2666
+ji2025_chili,pooled,pooled,pseudo_full__cal,generated:pseudo_full__cal,DC,500,500,0.052,0.072,0.0938790837401427,0.1877581674802854,2663,True,5168,2666
+ji2025_chili,pooled,pooled,pseudo_full__cal,broadcast:conditions_pooled_cal.npz@b0274507,DC,10,10,0.0,0.0,0.0009859988168014198,0.0019719976336028395,5071,True,5168,5541
+ji2025_chili,pooled,pooled,pseudo_full__cal,broadcast:conditions_pooled_cal.npz@b0274507,DC,20,20,0.05,0.05,0.0019719976336028395,0.003943995267205679,5071,True,5168,5541
+ji2025_chili,pooled,pooled,pseudo_full__cal,broadcast:conditions_pooled_cal.npz@b0274507,DC,50,50,0.08,0.08,0.004929994084007099,0.009859988168014198,5071,True,5168,5541
+ji2025_chili,pooled,pooled,pseudo_full__cal,broadcast:conditions_pooled_cal.npz@b0274507,DC,100,100,0.07,0.07,0.009859988168014198,0.019719976336028396,5071,True,5168,5541
+ji2025_chili,pooled,pooled,pseudo_full__cal,broadcast:conditions_pooled_cal.npz@b0274507,DC,200,200,0.09,0.1,0.019719976336028396,0.03943995267205679,5071,True,5168,5541
+ji2025_chili,pooled,pooled,pseudo_full__cal,broadcast:conditions_pooled_cal.npz@b0274507,DC,500,500,0.098,0.122,0.04929994084007099,0.09859988168014198,5071,True,5168,5541
+ji2025_chili,pooled,pooled,pseudo_full__raw,generated:pseudo_full__raw,T cell,10,10,0.0,0.0,0.0011322463768115942,0.0022644927536231885,4416,True,5696,4417
+ji2025_chili,pooled,pooled,pseudo_full__raw,generated:pseudo_full__raw,T cell,20,20,0.05,0.05,0.0022644927536231885,0.004528985507246377,4416,True,5696,4417
+ji2025_chili,pooled,pooled,pseudo_full__raw,generated:pseudo_full__raw,T cell,50,50,0.02,0.02,0.005661231884057971,0.011322463768115942,4416,True,5696,4417
+ji2025_chili,pooled,pooled,pseudo_full__raw,generated:pseudo_full__raw,T cell,100,100,0.04,0.05,0.011322463768115942,0.022644927536231884,4416,True,5696,4417
+ji2025_chili,pooled,pooled,pseudo_full__raw,generated:pseudo_full__raw,T cell,200,200,0.045,0.06,0.022644927536231884,0.04528985507246377,4416,True,5696,4417
+ji2025_chili,pooled,pooled,pseudo_full__raw,generated:pseudo_full__raw,T cell,500,500,0.104,0.122,0.05661231884057971,0.11322463768115942,4416,True,5696,4417
+ji2025_chili,pooled,pooled,pseudo_full__raw,broadcast:conditions_pooled_raw.npz@a13338f5,T cell,10,10,0.0,0.0,0.0009094216078574026,0.0018188432157148053,5498,True,5696,5541
+ji2025_chili,pooled,pooled,pseudo_full__raw,broadcast:conditions_pooled_raw.npz@a13338f5,T cell,20,20,0.0,0.0,0.0018188432157148053,0.0036376864314296106,5498,True,5696,5541
+ji2025_chili,pooled,pooled,pseudo_full__raw,broadcast:conditions_pooled_raw.npz@a13338f5,T cell,50,50,0.04,0.04,0.004547108039287013,0.009094216078574026,5498,True,5696,5541
+ji2025_chili,pooled,pooled,pseudo_full__raw,broadcast:conditions_pooled_raw.npz@a13338f5,T cell,100,100,0.09,0.09,0.009094216078574026,0.018188432157148052,5498,True,5696,5541
+ji2025_chili,pooled,pooled,pseudo_full__raw,broadcast:conditions_pooled_raw.npz@a13338f5,T cell,200,200,0.115,0.125,0.018188432157148052,0.036376864314296105,5498,True,5696,5541
+ji2025_chili,pooled,pooled,pseudo_full__raw,broadcast:conditions_pooled_raw.npz@a13338f5,T cell,500,500,0.16,0.178,0.045471080392870136,0.09094216078574027,5498,True,5696,5541
+ji2025_chili,pooled,pooled,pseudo_full__raw,generated:pseudo_full__raw,B cell,10,10,0.0,0.0,0.001668335001668335,0.00333667000333667,2997,True,5418,3002
+ji2025_chili,pooled,pooled,pseudo_full__raw,generated:pseudo_full__raw,B cell,20,20,0.0,0.0,0.00333667000333667,0.00667334000667334,2997,True,5418,3002
+ji2025_chili,pooled,pooled,pseudo_full__raw,generated:pseudo_full__raw,B cell,50,50,0.0,0.0,0.008341675008341674,0.01668335001668335,2997,True,5418,3002
+ji2025_chili,pooled,pooled,pseudo_full__raw,generated:pseudo_full__raw,B cell,100,100,0.0,0.0,0.01668335001668335,0.0333667000333667,2997,True,5418,3002
+ji2025_chili,pooled,pooled,pseudo_full__raw,generated:pseudo_full__raw,B cell,200,200,0.015,0.03,0.0333667000333667,0.0667334000667334,2997,True,5418,3002
+ji2025_chili,pooled,pooled,pseudo_full__raw,generated:pseudo_full__raw,B cell,500,500,0.052,0.128,0.08341675008341674,0.1668335001668335,2997,True,5418,3002
+ji2025_chili,pooled,pooled,pseudo_full__raw,broadcast:conditions_pooled_raw.npz@a13338f5,B cell,10,10,0.0,0.0,0.000949667616334283,0.001899335232668566,5265,True,5418,5541
+ji2025_chili,pooled,pooled,pseudo_full__raw,broadcast:conditions_pooled_raw.npz@a13338f5,B cell,20,20,0.0,0.0,0.001899335232668566,0.003798670465337132,5265,True,5418,5541
+ji2025_chili,pooled,pooled,pseudo_full__raw,broadcast:conditions_pooled_raw.npz@a13338f5,B cell,50,50,0.0,0.02,0.004748338081671415,0.00949667616334283,5265,True,5418,5541
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+ji2025_chili,pooled,pooled,real_lora__raw,broadcast:conditions_pooled_raw.npz@a13338f5,DC,200,200,0.095,0.105,0.019719976336028396,0.03943995267205679,5071,True,5168,5541
+ji2025_chili,pooled,pooled,real_lora__raw,broadcast:conditions_pooled_raw.npz@a13338f5,DC,500,500,0.1,0.122,0.04929994084007099,0.09859988168014198,5071,True,5168,5541
+ji2025_chili,pooled,pooled,zs__cal,generated:zs__cal,T cell,10,10,0.0,0.0,0.0011571395510298543,0.0023142791020597086,4321,True,5696,4326
+ji2025_chili,pooled,pooled,zs__cal,generated:zs__cal,T cell,20,20,0.0,0.0,0.0023142791020597086,0.004628558204119417,4321,True,5696,4326
+ji2025_chili,pooled,pooled,zs__cal,generated:zs__cal,T cell,50,50,0.02,0.02,0.005785697755149271,0.011571395510298541,4321,True,5696,4326
+ji2025_chili,pooled,pooled,zs__cal,generated:zs__cal,T cell,100,100,0.03,0.03,0.011571395510298541,0.023142791020597082,4321,True,5696,4326
+ji2025_chili,pooled,pooled,zs__cal,generated:zs__cal,T cell,200,200,0.04,0.045,0.023142791020597082,0.046285582041194165,4321,True,5696,4326
+ji2025_chili,pooled,pooled,zs__cal,generated:zs__cal,T cell,500,500,0.076,0.114,0.05785697755149271,0.11571395510298542,4321,True,5696,4326
+ji2025_chili,pooled,pooled,zs__cal,broadcast:conditions_pooled_cal.npz@b0274507,T cell,10,10,0.0,0.0,0.0009094216078574026,0.0018188432157148053,5498,True,5696,5541
+ji2025_chili,pooled,pooled,zs__cal,broadcast:conditions_pooled_cal.npz@b0274507,T cell,20,20,0.0,0.0,0.0018188432157148053,0.0036376864314296106,5498,True,5696,5541
+ji2025_chili,pooled,pooled,zs__cal,broadcast:conditions_pooled_cal.npz@b0274507,T cell,50,50,0.02,0.02,0.004547108039287013,0.009094216078574026,5498,True,5696,5541
+ji2025_chili,pooled,pooled,zs__cal,broadcast:conditions_pooled_cal.npz@b0274507,T cell,100,100,0.08,0.08,0.009094216078574026,0.018188432157148052,5498,True,5696,5541
+ji2025_chili,pooled,pooled,zs__cal,broadcast:conditions_pooled_cal.npz@b0274507,T cell,200,200,0.115,0.12,0.018188432157148052,0.036376864314296105,5498,True,5696,5541
+ji2025_chili,pooled,pooled,zs__cal,broadcast:conditions_pooled_cal.npz@b0274507,T cell,500,500,0.17,0.188,0.045471080392870136,0.09094216078574027,5498,True,5696,5541
+ji2025_chili,pooled,pooled,zs__cal,generated:zs__cal,B cell,10,10,0.0,0.0,0.001513317191283293,0.003026634382566586,3304,True,5418,3313
+ji2025_chili,pooled,pooled,zs__cal,generated:zs__cal,B cell,20,20,0.0,0.0,0.003026634382566586,0.006053268765133172,3304,True,5418,3313
+ji2025_chili,pooled,pooled,zs__cal,generated:zs__cal,B cell,50,50,0.0,0.02,0.007566585956416465,0.01513317191283293,3304,True,5418,3313
+ji2025_chili,pooled,pooled,zs__cal,generated:zs__cal,B cell,100,100,0.01,0.02,0.01513317191283293,0.03026634382566586,3304,True,5418,3313
+ji2025_chili,pooled,pooled,zs__cal,generated:zs__cal,B cell,200,200,0.025,0.06,0.03026634382566586,0.06053268765133172,3304,True,5418,3313
+ji2025_chili,pooled,pooled,zs__cal,generated:zs__cal,B cell,500,500,0.054,0.132,0.07566585956416465,0.1513317191283293,3304,True,5418,3313
+ji2025_chili,pooled,pooled,zs__cal,broadcast:conditions_pooled_cal.npz@b0274507,B cell,10,10,0.0,0.0,0.000949667616334283,0.001899335232668566,5265,True,5418,5541
+ji2025_chili,pooled,pooled,zs__cal,broadcast:conditions_pooled_cal.npz@b0274507,B cell,20,20,0.0,0.0,0.001899335232668566,0.003798670465337132,5265,True,5418,5541
+ji2025_chili,pooled,pooled,zs__cal,broadcast:conditions_pooled_cal.npz@b0274507,B cell,50,50,0.0,0.02,0.004748338081671415,0.00949667616334283,5265,True,5418,5541
+ji2025_chili,pooled,pooled,zs__cal,broadcast:conditions_pooled_cal.npz@b0274507,B cell,100,100,0.01,0.03,0.00949667616334283,0.01899335232668566,5265,True,5418,5541
+ji2025_chili,pooled,pooled,zs__cal,broadcast:conditions_pooled_cal.npz@b0274507,B cell,200,200,0.045,0.09,0.01899335232668566,0.03798670465337132,5265,True,5418,5541
+ji2025_chili,pooled,pooled,zs__cal,broadcast:conditions_pooled_cal.npz@b0274507,B cell,500,500,0.072,0.138,0.04748338081671415,0.0949667616334283,5265,True,5418,5541
+ji2025_chili,pooled,pooled,zs__cal,generated:zs__cal,Monocyte,10,10,0.0,0.0,0.0013085579691180318,0.0026171159382360636,3821,True,5699,3825
+ji2025_chili,pooled,pooled,zs__cal,generated:zs__cal,Monocyte,20,20,0.0,0.0,0.0026171159382360636,0.005234231876472127,3821,True,5699,3825
+ji2025_chili,pooled,pooled,zs__cal,generated:zs__cal,Monocyte,50,50,0.02,0.02,0.00654278984559016,0.01308557969118032,3821,True,5699,3825
+ji2025_chili,pooled,pooled,zs__cal,generated:zs__cal,Monocyte,100,100,0.06,0.06,0.01308557969118032,0.02617115938236064,3821,True,5699,3825
+ji2025_chili,pooled,pooled,zs__cal,generated:zs__cal,Monocyte,200,200,0.05,0.05,0.02617115938236064,0.05234231876472128,3821,True,5699,3825
+ji2025_chili,pooled,pooled,zs__cal,generated:zs__cal,Monocyte,500,500,0.082,0.122,0.06542789845590159,0.13085579691180318,3821,True,5699,3825
+ji2025_chili,pooled,pooled,zs__cal,broadcast:conditions_pooled_cal.npz@b0274507,Monocyte,10,10,0.0,0.0,0.0009087604507451836,0.0018175209014903672,5502,True,5699,5541
+ji2025_chili,pooled,pooled,zs__cal,broadcast:conditions_pooled_cal.npz@b0274507,Monocyte,20,20,0.05,0.05,0.0018175209014903672,0.0036350418029807343,5502,True,5699,5541
+ji2025_chili,pooled,pooled,zs__cal,broadcast:conditions_pooled_cal.npz@b0274507,Monocyte,50,50,0.1,0.1,0.0045438022537259174,0.009087604507451835,5502,True,5699,5541
+ji2025_chili,pooled,pooled,zs__cal,broadcast:conditions_pooled_cal.npz@b0274507,Monocyte,100,100,0.1,0.1,0.009087604507451835,0.01817520901490367,5502,True,5699,5541
+ji2025_chili,pooled,pooled,zs__cal,broadcast:conditions_pooled_cal.npz@b0274507,Monocyte,200,200,0.1,0.1,0.01817520901490367,0.03635041802980734,5502,True,5699,5541
+ji2025_chili,pooled,pooled,zs__cal,broadcast:conditions_pooled_cal.npz@b0274507,Monocyte,500,500,0.164,0.17,0.045438022537259176,0.09087604507451835,5502,True,5699,5541
+ji2025_chili,pooled,pooled,zs__cal,generated:zs__cal,NK cell,10,10,0.0,0.0,0.0016134236850596966,0.003226847370119393,3099,True,5516,3102
+ji2025_chili,pooled,pooled,zs__cal,generated:zs__cal,NK cell,20,20,0.0,0.0,0.003226847370119393,0.006453694740238786,3099,True,5516,3102
+ji2025_chili,pooled,pooled,zs__cal,generated:zs__cal,NK cell,50,50,0.02,0.02,0.008067118425298484,0.016134236850596968,3099,True,5516,3102
+ji2025_chili,pooled,pooled,zs__cal,generated:zs__cal,NK cell,100,100,0.01,0.01,0.016134236850596968,0.032268473701193935,3099,True,5516,3102
+ji2025_chili,pooled,pooled,zs__cal,generated:zs__cal,NK cell,200,200,0.005,0.015,0.032268473701193935,0.06453694740238787,3099,True,5516,3102
+ji2025_chili,pooled,pooled,zs__cal,generated:zs__cal,NK cell,500,500,0.014,0.038,0.08067118425298483,0.16134236850596967,3099,True,5516,3102
+ji2025_chili,pooled,pooled,zs__cal,broadcast:conditions_pooled_cal.npz@b0274507,NK cell,10,10,0.0,0.0,0.0009338812103100486,0.0018677624206200972,5354,True,5516,5541
+ji2025_chili,pooled,pooled,zs__cal,broadcast:conditions_pooled_cal.npz@b0274507,NK cell,20,20,0.0,0.0,0.0018677624206200972,0.0037355248412401943,5354,True,5516,5541
+ji2025_chili,pooled,pooled,zs__cal,broadcast:conditions_pooled_cal.npz@b0274507,NK cell,50,50,0.02,0.02,0.0046694060515502425,0.009338812103100485,5354,True,5516,5541
+ji2025_chili,pooled,pooled,zs__cal,broadcast:conditions_pooled_cal.npz@b0274507,NK cell,100,100,0.04,0.04,0.009338812103100485,0.01867762420620097,5354,True,5516,5541
+ji2025_chili,pooled,pooled,zs__cal,broadcast:conditions_pooled_cal.npz@b0274507,NK cell,200,200,0.05,0.055,0.01867762420620097,0.03735524841240194,5354,True,5516,5541
+ji2025_chili,pooled,pooled,zs__cal,broadcast:conditions_pooled_cal.npz@b0274507,NK cell,500,500,0.078,0.098,0.04669406051550243,0.09338812103100486,5354,True,5516,5541
+ji2025_chili,pooled,pooled,zs__cal,generated:zs__cal,DC,10,10,0.0,0.0,0.002012882447665056,0.004025764895330112,2484,True,5168,2485
+ji2025_chili,pooled,pooled,zs__cal,generated:zs__cal,DC,20,20,0.0,0.0,0.004025764895330112,0.008051529790660225,2484,True,5168,2485
+ji2025_chili,pooled,pooled,zs__cal,generated:zs__cal,DC,50,50,0.02,0.02,0.010064412238325281,0.020128824476650563,2484,True,5168,2485
+ji2025_chili,pooled,pooled,zs__cal,generated:zs__cal,DC,100,100,0.05,0.05,0.020128824476650563,0.040257648953301126,2484,True,5168,2485
+ji2025_chili,pooled,pooled,zs__cal,generated:zs__cal,DC,200,200,0.08,0.08,0.040257648953301126,0.08051529790660225,2484,True,5168,2485
+ji2025_chili,pooled,pooled,zs__cal,generated:zs__cal,DC,500,500,0.104,0.112,0.10064412238325282,0.20128824476650564,2484,True,5168,2485
+ji2025_chili,pooled,pooled,zs__cal,broadcast:conditions_pooled_cal.npz@b0274507,DC,10,10,0.0,0.0,0.0009859988168014198,0.0019719976336028395,5071,True,5168,5541
+ji2025_chili,pooled,pooled,zs__cal,broadcast:conditions_pooled_cal.npz@b0274507,DC,20,20,0.05,0.05,0.0019719976336028395,0.003943995267205679,5071,True,5168,5541
+ji2025_chili,pooled,pooled,zs__cal,broadcast:conditions_pooled_cal.npz@b0274507,DC,50,50,0.08,0.08,0.004929994084007099,0.009859988168014198,5071,True,5168,5541
+ji2025_chili,pooled,pooled,zs__cal,broadcast:conditions_pooled_cal.npz@b0274507,DC,100,100,0.07,0.07,0.009859988168014198,0.019719976336028396,5071,True,5168,5541
+ji2025_chili,pooled,pooled,zs__cal,broadcast:conditions_pooled_cal.npz@b0274507,DC,200,200,0.09,0.1,0.019719976336028396,0.03943995267205679,5071,True,5168,5541
+ji2025_chili,pooled,pooled,zs__cal,broadcast:conditions_pooled_cal.npz@b0274507,DC,500,500,0.098,0.122,0.04929994084007099,0.09859988168014198,5071,True,5168,5541
+ji2025_chili,pooled,pooled,zs__pseudo,generated:zs__pseudo,T cell,10,10,0.0,0.0,0.0011587485515643105,0.002317497103128621,4315,True,5696,4318
+ji2025_chili,pooled,pooled,zs__pseudo,generated:zs__pseudo,T cell,20,20,0.0,0.0,0.002317497103128621,0.004634994206257242,4315,True,5696,4318
+ji2025_chili,pooled,pooled,zs__pseudo,generated:zs__pseudo,T cell,50,50,0.0,0.0,0.005793742757821553,0.011587485515643106,4315,True,5696,4318
+ji2025_chili,pooled,pooled,zs__pseudo,generated:zs__pseudo,T cell,100,100,0.02,0.02,0.011587485515643106,0.023174971031286212,4315,True,5696,4318
+ji2025_chili,pooled,pooled,zs__pseudo,generated:zs__pseudo,T cell,200,200,0.045,0.05,0.023174971031286212,0.046349942062572425,4315,True,5696,4318
+ji2025_chili,pooled,pooled,zs__pseudo,generated:zs__pseudo,T cell,500,500,0.074,0.09,0.05793742757821553,0.11587485515643106,4315,True,5696,4318
+ji2025_chili,pooled,pooled,zs__pseudo,broadcast:conditions_pooled_pseudo.npz@089c6d4f,T cell,10,10,0.1,0.1,0.0008778089887640449,0.0017556179775280898,5696,True,5696,5749
+ji2025_chili,pooled,pooled,zs__pseudo,broadcast:conditions_pooled_pseudo.npz@089c6d4f,T cell,20,20,0.05,0.05,0.0017556179775280898,0.0035112359550561797,5696,True,5696,5749
+ji2025_chili,pooled,pooled,zs__pseudo,broadcast:conditions_pooled_pseudo.npz@089c6d4f,T cell,50,50,0.24,0.24,0.004389044943820225,0.00877808988764045,5696,True,5696,5749
+ji2025_chili,pooled,pooled,zs__pseudo,broadcast:conditions_pooled_pseudo.npz@089c6d4f,T cell,100,100,0.38,0.38,0.00877808988764045,0.0175561797752809,5696,True,5696,5749
+ji2025_chili,pooled,pooled,zs__pseudo,broadcast:conditions_pooled_pseudo.npz@089c6d4f,T cell,200,200,0.435,0.435,0.0175561797752809,0.0351123595505618,5696,True,5696,5749
+ji2025_chili,pooled,pooled,zs__pseudo,broadcast:conditions_pooled_pseudo.npz@089c6d4f,T cell,500,500,0.45,0.45,0.04389044943820225,0.0877808988764045,5696,True,5696,5749
+ji2025_chili,pooled,pooled,zs__pseudo,generated:zs__pseudo,B cell,10,10,0.0,0.0,0.0014710208884966167,0.0029420417769932335,3399,True,5418,3404
+ji2025_chili,pooled,pooled,zs__pseudo,generated:zs__pseudo,B cell,20,20,0.0,0.0,0.0029420417769932335,0.005884083553986467,3399,True,5418,3404
+ji2025_chili,pooled,pooled,zs__pseudo,generated:zs__pseudo,B cell,50,50,0.0,0.02,0.0073551044424830835,0.014710208884966167,3399,True,5418,3404
+ji2025_chili,pooled,pooled,zs__pseudo,generated:zs__pseudo,B cell,100,100,0.0,0.04,0.014710208884966167,0.029420417769932334,3399,True,5418,3404
+ji2025_chili,pooled,pooled,zs__pseudo,generated:zs__pseudo,B cell,200,200,0.01,0.085,0.029420417769932334,0.05884083553986467,3399,True,5418,3404
+ji2025_chili,pooled,pooled,zs__pseudo,generated:zs__pseudo,B cell,500,500,0.028,0.14,0.07355104442483083,0.14710208884966167,3399,True,5418,3404
+ji2025_chili,pooled,pooled,zs__pseudo,broadcast:conditions_pooled_pseudo.npz@089c6d4f,B cell,10,10,0.0,0.0,0.0009228497600590623,0.0018456995201181247,5418,True,5418,5749
+ji2025_chili,pooled,pooled,zs__pseudo,broadcast:conditions_pooled_pseudo.npz@089c6d4f,B cell,20,20,0.05,0.05,0.0018456995201181247,0.0036913990402362494,5418,True,5418,5749
+ji2025_chili,pooled,pooled,zs__pseudo,broadcast:conditions_pooled_pseudo.npz@089c6d4f,B cell,50,50,0.16,0.16,0.004614248800295312,0.009228497600590625,5418,True,5418,5749
+ji2025_chili,pooled,pooled,zs__pseudo,broadcast:conditions_pooled_pseudo.npz@089c6d4f,B cell,100,100,0.16,0.16,0.009228497600590625,0.01845699520118125,5418,True,5418,5749
+ji2025_chili,pooled,pooled,zs__pseudo,broadcast:conditions_pooled_pseudo.npz@089c6d4f,B cell,200,200,0.16,0.16,0.01845699520118125,0.0369139904023625,5418,True,5418,5749
+ji2025_chili,pooled,pooled,zs__pseudo,broadcast:conditions_pooled_pseudo.npz@089c6d4f,B cell,500,500,0.208,0.214,0.04614248800295312,0.09228497600590624,5418,True,5418,5749
+ji2025_chili,pooled,pooled,zs__pseudo,generated:zs__pseudo,Monocyte,10,10,0.0,0.0,0.00127942681678608,0.00255885363357216,3908,True,5699,3908
+ji2025_chili,pooled,pooled,zs__pseudo,generated:zs__pseudo,Monocyte,20,20,0.0,0.0,0.00255885363357216,0.00511770726714432,3908,True,5699,3908
+ji2025_chili,pooled,pooled,zs__pseudo,generated:zs__pseudo,Monocyte,50,50,0.04,0.04,0.0063971340839304,0.0127942681678608,3908,True,5699,3908
+ji2025_chili,pooled,pooled,zs__pseudo,generated:zs__pseudo,Monocyte,100,100,0.09,0.09,0.0127942681678608,0.0255885363357216,3908,True,5699,3908
+ji2025_chili,pooled,pooled,zs__pseudo,generated:zs__pseudo,Monocyte,200,200,0.1,0.1,0.0255885363357216,0.0511770726714432,3908,True,5699,3908
+ji2025_chili,pooled,pooled,zs__pseudo,generated:zs__pseudo,Monocyte,500,500,0.142,0.158,0.06397134083930399,0.12794268167860798,3908,True,5699,3908
+ji2025_chili,pooled,pooled,zs__pseudo,broadcast:conditions_pooled_pseudo.npz@089c6d4f,Monocyte,10,10,0.0,0.0,0.0008773469029654326,0.001754693805930865,5699,True,5699,5749
+ji2025_chili,pooled,pooled,zs__pseudo,broadcast:conditions_pooled_pseudo.npz@089c6d4f,Monocyte,20,20,0.15,0.15,0.001754693805930865,0.00350938761186173,5699,True,5699,5749
+ji2025_chili,pooled,pooled,zs__pseudo,broadcast:conditions_pooled_pseudo.npz@089c6d4f,Monocyte,50,50,0.12,0.12,0.0043867345148271624,0.008773469029654325,5699,True,5699,5749
+ji2025_chili,pooled,pooled,zs__pseudo,broadcast:conditions_pooled_pseudo.npz@089c6d4f,Monocyte,100,100,0.12,0.12,0.008773469029654325,0.01754693805930865,5699,True,5699,5749
+ji2025_chili,pooled,pooled,zs__pseudo,broadcast:conditions_pooled_pseudo.npz@089c6d4f,Monocyte,200,200,0.23,0.23,0.01754693805930865,0.0350938761186173,5699,True,5699,5749
+ji2025_chili,pooled,pooled,zs__pseudo,broadcast:conditions_pooled_pseudo.npz@089c6d4f,Monocyte,500,500,0.316,0.316,0.043867345148271626,0.08773469029654325,5699,True,5699,5749
+ji2025_chili,pooled,pooled,zs__pseudo,generated:zs__pseudo,NK cell,10,10,0.0,0.0,0.0013078733978550876,0.0026157467957101752,3823,True,5516,3827
+ji2025_chili,pooled,pooled,zs__pseudo,generated:zs__pseudo,NK cell,20,20,0.0,0.0,0.0026157467957101752,0.0052314935914203504,3823,True,5516,3827
+ji2025_chili,pooled,pooled,zs__pseudo,generated:zs__pseudo,NK cell,50,50,0.0,0.0,0.006539366989275438,0.013078733978550876,3823,True,5516,3827
+ji2025_chili,pooled,pooled,zs__pseudo,generated:zs__pseudo,NK cell,100,100,0.02,0.05,0.013078733978550876,0.026157467957101752,3823,True,5516,3827
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paper-releases/pbisc-diffusion/updates/20261013T115045Z-figure-strengthening-154/diffusion/dataset/server_1/model8/presentations/2026-09-30--paper-summary--r00/data/strengthening_20261013/disease_metrics/source_snapshot/plans/paired_finetune_intradataset_20260927/scores_contrast/ji2025_chili/pooled/ceiling.csv

@@ -0,0 +1,51 @@
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+ji2025_chili,pooled,pooled,split_half_A_vs_B,,NK cell,3051.0,0.8597527062579001,0.006809170503855263,0.7069491014230271,0.01051395029754475,0.857080312444169,0.6945343694291769,0.8669745937307356,0.7215036999333527,0.8665572629257434,0.7116244926425445,0.8513005555497886,0.7074865671737648,0.8568508066390638,0.6995963779362973,0.924588202899138,0.9615550961328935,0.8283189004682882,0.9101202670352354,18.0,15.0,18.0,15.0,9068.0,9079.0,
+ji2025_chili,pooled,pooled,generated:pseudo_full__cal,pseudo_full__cal,T cell,3021.0,0.41251807786598615,0.008622398541848196,0.36072573919792356,0.002840510767388199,0.4102355132057702,0.357884473879105,0.42461514450610593,0.35978435287123106,0.4153613103323994,0.3619633345289777,0.40082074660646255,0.35895321310068773,0.4115576746791925,0.3650433216096164,,,,,,,,,,,
+ji2025_chili,pooled,pooled,generated:pseudo_full__cal,pseudo_full__cal,B cell,3245.0,0.0865194317443831,0.014284947876251829,0.07969432504249613,0.009718623353423031,0.08864320414756152,0.08172000997697063,0.06777824584325862,0.06677470244664288,0.09563694057748001,0.08872085248963889,0.10348383133720045,0.08848820520687656,0.07705493681641491,0.07276785509235166,,,,,,,,,,,
+ji2025_chili,pooled,pooled,generated:pseudo_full__cal,pseudo_full__cal,Monocyte,3154.0,0.34866000796605834,0.006740164061366841,0.18303518381064804,0.007800744389211703,0.35774227407772824,0.19085081520520522,0.33950452059658837,0.1758425788927845,0.35090641460279237,0.18504743720314779,0.3455732865960205,0.17387320582899174,0.34957354395716206,0.189561881923111,,,,,,,,,,,
+ji2025_chili,pooled,pooled,generated:pseudo_full__cal,pseudo_full__cal,NK cell,3051.0,0.11475543696372333,0.0041823112367936136,0.10394035901607221,0.005528001074202518,0.11544959157741425,0.10162521002611674,0.10843655860093182,0.09834879271869024,0.11865303634857505,0.10861954676507543,0.11815613084173879,0.11096274506850393,0.11308186744995669,0.1001455005019748,,,,,,,,,,,
+ji2025_chili,pooled,pooled,generated:pseudo_full__raw,pseudo_full__raw,T cell,3021.0,0.25455709655302383,0.00482352187430592,0.17718984841626334,0.00540821644752665,0.25317807342543386,0.17248861348028846,0.25762707409961927,0.1775563282673491,0.25852381874893365,0.18147988978136909,0.2467282858033622,0.17103345748246646,0.25672823068777034,0.18339095306984352,,,,,,,,,,,
+ji2025_chili,pooled,pooled,generated:pseudo_full__raw,pseudo_full__raw,B cell,3245.0,-0.01852815413886528,0.006504399432994282,-0.0009710107551353233,0.008371619544410812,-0.01843651231415948,0.006234919284695275,-0.02153520443540525,0.0009727834045827638,-0.02265480767107978,-0.010787500646301747,-0.007314480215958112,0.007363826011181537,-0.022699766057723763,-0.008639081829834446,,,,,,,,,,,
+ji2025_chili,pooled,pooled,generated:pseudo_full__raw,pseudo_full__raw,Monocyte,3154.0,0.3414712287190934,0.0028338710927355423,0.24138511698898038,0.006587187316725308,0.34586691587599355,0.24886672429123777,0.33946762438224404,0.2384654505664981,0.3398332640205161,0.23980057058014081,0.3393883663085187,0.2327507210158383,0.3427999730081948,0.2470421184911869,,,,,,,,,,,
+ji2025_chili,pooled,pooled,generated:pseudo_full__raw,pseudo_full__raw,NK cell,3051.0,0.034731886350344895,0.00894867205338907,0.015133205552746987,0.013581087227290747,0.038423479364314506,0.02450106605817291,0.04721309283274157,0.031262421492401056,0.027144747832423533,0.0032226043754661187,0.03575342758931827,0.0171637065912727,0.025124684132926598,-0.00048377075357784684,,,,,,,,,,,
+ji2025_chili,pooled,pooled,generated:real_lora__raw,real_lora__raw,T cell,3021.0,0.4750662028342589,0.003606623403975907,0.42347517506035925,0.0023712559323266127,0.4746632939151404,0.42242226187451104,0.4696050646352292,0.4229915740573051,0.47444006131650845,0.424693747153376,0.4777675895003417,0.4205025761230357,0.47885500480407467,0.4267657160935683,,,,,,,,,,,
+ji2025_chili,pooled,pooled,generated:real_lora__raw,real_lora__raw,B cell,3245.0,0.22607892392498025,0.0076550769408848625,0.16239231989359434,0.012657589435225295,0.2344404872266219,0.17851277544720082,0.2184930176025179,0.15300272340276402,0.21738489858798027,0.14668228266164288,0.23007512848657902,0.16857107764949555,0.23000108772120215,0.16519274030686848,,,,,,,,,,,
+ji2025_chili,pooled,pooled,generated:real_lora__raw,real_lora__raw,Monocyte,3154.0,0.7820783044478514,0.004501225355609142,0.5869948915064674,0.0026261920253824113,0.7754452777601194,0.5866718359778845,0.787737165919273,0.5875616920638136,0.7816658056941628,0.5850813507426349,0.7813765040179224,0.5845051718533619,0.7841667688477794,0.5911544068946424,,,,,,,,,,,
+ji2025_chili,pooled,pooled,generated:real_lora__raw,real_lora__raw,NK cell,3051.0,0.4041971472146617,0.013161119417774167,0.2957477491990417,0.007853955152213243,0.4074809044336693,0.29808482969455014,0.3996930598580119,0.28765625337205075,0.39896134471570227,0.2983855644780627,0.4249400064350657,0.3063611452706347,0.3899104206308594,0.28825095317991006,,,,,,,,,,,
+ji2025_chili,pooled,pooled,generated:zs__cal,zs__cal,T cell,3021.0,0.2286993592780871,0.0017626312073075567,0.20130671806706682,0.0030726459943019833,0.22865013313759863,0.1982677418617969,0.2297360495317285,0.19962868474162368,0.23076558776685374,0.2063504775147113,0.22607285262599716,0.20147541937084754,0.22827217332825733,0.20081126684635453,,,,,,,,,,,
+ji2025_chili,pooled,pooled,generated:zs__cal,zs__cal,B cell,3245.0,-0.0002875593977355399,0.005061518013593838,0.003773774988839803,0.00449531806935684,-0.00656630574721288,-0.0003853895680992846,-0.0036666257833697217,-0.00011044974415451841,0.0053748889030895445,0.009292077097995443,0.00411743707052285,0.007757163649006236,-0.0006971914317074935,0.0023154735094511394,,,,,,,,,,,
+ji2025_chili,pooled,pooled,generated:zs__cal,zs__cal,Monocyte,3154.0,0.2080374134776856,0.000998729158378246,0.1333281506611105,0.003581642215581286,0.20846027651189625,0.138597042315418,0.209520394751678,0.13530665561936908,0.20697388019663637,0.13086855883736054,0.20786720232978945,0.12990327459592124,0.20736531359842786,0.13196522193748364,,,,,,,,,,,
+ji2025_chili,pooled,pooled,generated:zs__cal,zs__cal,NK cell,3051.0,0.11776162304329849,0.006887981502951624,0.10506685191726658,0.009043774203642125,0.11823848341943534,0.11228582208667806,0.1194858075671625,0.10646833674155294,0.1103022058110189,0.10035751107662717,0.12804289400417473,0.11413979018810577,0.112738724414701,0.092082799493369,,,,,,,,,,,
+ji2025_chili,pooled,pooled,generated:zs__pseudo,zs__pseudo,T cell,3021.0,0.2731532753814697,0.002923922053379566,0.35456267577466255,0.003150571386225753,0.272472155425497,0.3528504645264521,0.26855800458408247,0.3521034685165635,0.27371528343580703,0.3577444917436793,0.2747396595463842,0.3518864028490937,0.2762812739155777,0.358228551237524,,,,,,,,,,,
+ji2025_chili,pooled,pooled,generated:zs__pseudo,zs__pseudo,B cell,3245.0,-0.062037484556851694,0.009175571690436438,-0.07759808144967291,0.00915155418521802,-0.055816109345756114,-0.06654310033889607,-0.0655644467500341,-0.08597131264195924,-0.07667231719662715,-0.0880420549713092,-0.05634508294294498,-0.07239834773345585,-0.05578946654889614,-0.07503559156274417,,,,,,,,,,,
+ji2025_chili,pooled,pooled,generated:zs__pseudo,zs__pseudo,Monocyte,3154.0,0.31560207214941416,0.002644433048235877,0.20052376406039105,0.00736844898392207,0.31475045346647457,0.19991249310441386,0.3178208964843195,0.19870398051129204,0.3173801081199541,0.20290959210398712,0.3166955331478216,0.2107394558054328,0.31136336952850097,0.1903532987768294,,,,,,,,,,,
+ji2025_chili,pooled,pooled,generated:zs__pseudo,zs__pseudo,NK cell,3051.0,0.03318622011434673,0.006416095172144604,-0.014445716615029002,0.010589065535229893,0.04125355012195162,-0.00217516250565258,0.0328537651019437,-0.01076479785237386,0.027980039563498375,-0.02310970062685159,0.03780282968170307,-0.008529670026282174,0.02604091610263686,-0.027649252063984806,,,,,,,,,,,
+ji2025_chili,pooled,pooled,generated:zs__raw,zs__raw,T cell,3021.0,0.17364496028934956,0.0058516819160428545,0.1665903072212212,0.0024774873541475776,0.17304318149861997,0.16343051419079124,0.1790355253036452,0.1662797759547113,0.179168441334881,0.1677582959050089,0.16503425539885186,0.16545494047809534,0.1719433979107499,0.17002800957749906,,,,,,,,,,,
+ji2025_chili,pooled,pooled,generated:zs__raw,zs__raw,B cell,3245.0,-0.06434235120646961,0.00865322457911584,-0.029438067042385302,0.008886002185392185,-0.06020829279886648,-0.01778364093897324,-0.06971107581477433,-0.038387268475895985,-0.0692093569651025,-0.03282843905840868,-0.05101297947931048,-0.022454674541508218,-0.07157005097429425,-0.03573631219714038,,,,,,,,,,,
+ji2025_chili,pooled,pooled,generated:zs__raw,zs__raw,Monocyte,3154.0,0.21145371017163725,0.0025956232396539334,0.15653538196642164,0.003386491353329238,0.2151770423679179,0.15714475448871185,0.20985645507421197,0.1546538276639356,0.2088702820799571,0.15490451044565448,0.2130527739065817,0.16217547114653091,0.21031199742951756,0.15379834608727544,,,,,,,,,,,
+ji2025_chili,pooled,pooled,generated:zs__raw,zs__raw,NK cell,3051.0,0.015092213671967811,0.0072233787860104,-0.011274199501216515,0.00798641597289123,0.00990150773327788,-0.014955595944182483,0.026074266414521808,0.0027230399485861766,0.00994636704597503,-0.01730528654448157,0.018921078992995766,-0.013190313670504203,0.01061784817306857,-0.01364284129550049,,,,,,,,,,,
+ji2025_chili,pooled,pooled,broadcast:conditions_pooled_cal.npz@b0274507,,T cell,3021.0,0.17634556935825155,0.003110540829035138,0.10805757250502353,0.0019624886665951793,0.17359541182844615,0.10662835649735057,0.17305423126465083,0.10733995113658765,0.17914489801930408,0.108777936192149,0.17606750568178525,0.10639263033957673,0.17986579999707136,0.11114898835945367,,,,,,,,,,,b02745073ef16c9a53a1bc7befa99b01126c443cbb34cffc952d44dc525b4c79
+ji2025_chili,pooled,pooled,broadcast:conditions_pooled_cal.npz@b0274507,,B cell,3245.0,0.09801799340998911,0.009009080860368692,0.03270799322023358,0.011116032198651522,0.10414195848241553,0.043844857584611395,0.08668242169462433,0.023609093559280897,0.09577504176588754,0.029888237326021968,0.10967748428060492,0.04491388653926729,0.09381306082641326,0.021283891091986328,,,,,,,,,,,b02745073ef16c9a53a1bc7befa99b01126c443cbb34cffc952d44dc525b4c79
+ji2025_chili,pooled,pooled,broadcast:conditions_pooled_cal.npz@b0274507,,Monocyte,3154.0,0.39241352978722277,0.002059640715286991,0.22871933201217387,0.005359120500390348,0.39265170379187625,0.23279074010068065,0.39102616503150295,0.22754734881221986,0.3934218064646872,0.22647243310539694,0.3898419779826326,0.22162293859673132,0.39512599566541473,0.2351631994458407,,,,,,,,,,,b02745073ef16c9a53a1bc7befa99b01126c443cbb34cffc952d44dc525b4c79
+ji2025_chili,pooled,pooled,broadcast:conditions_pooled_cal.npz@b0274507,,NK cell,3051.0,0.14291469395708245,0.006418475192346155,0.06718590341758254,0.007649754772012353,0.13850249430457076,0.06307890916929326,0.14774957284150106,0.07517537118338782,0.13585354113358367,0.06833667797417067,0.1512363896766725,0.07301748038983644,0.14123147182908427,0.05632107837122456,,,,,,,,,,,b02745073ef16c9a53a1bc7befa99b01126c443cbb34cffc952d44dc525b4c79
+ji2025_chili,pooled,pooled,broadcast:conditions_pooled_raw.npz@a13338f5,,T cell,3021.0,0.21959070752598212,0.0018957508310978326,0.09915905890125064,0.0008385726212966225,0.2197941403935097,0.09951530532359423,0.2197183107989401,0.09913063535800122,0.21894516682587872,0.09925405188576206,0.2171162647272274,0.09781039847788207,0.22237965488435468,0.10008490346101358,,,,,,,,,,,a13338f530600178689cf085a337667882704cc2bbe48b04ac9a60c9a1fac007
+ji2025_chili,pooled,pooled,broadcast:conditions_pooled_raw.npz@a13338f5,,B cell,3245.0,0.12541425495803574,0.011254363578552603,0.036591345783669106,0.009570911339782185,0.13358867682532666,0.04419816614691421,0.11319447053014353,0.025605925532903535,0.11845911833483741,0.03398605742015746,0.14044390844815136,0.0486158757685558,0.12138510065171966,0.030550704049814515,,,,,,,,,,,a13338f530600178689cf085a337667882704cc2bbe48b04ac9a60c9a1fac007
+ji2025_chili,pooled,pooled,broadcast:conditions_pooled_raw.npz@a13338f5,,Monocyte,3154.0,0.3953585113304115,0.001476500364600941,0.2242999241874751,0.004518497597061153,0.39429047657840666,0.2277196579761505,0.39449949763493797,0.22234537432562648,0.39613898722709867,0.22116385915703787,0.39426219381841593,0.2198950588281528,0.39760140139319833,0.23037567065040787,,,,,,,,,,,a13338f530600178689cf085a337667882704cc2bbe48b04ac9a60c9a1fac007
+ji2025_chili,pooled,pooled,broadcast:conditions_pooled_raw.npz@a13338f5,,NK cell,3051.0,0.19645623091008718,0.00732809336964877,0.07912526762028013,0.007060569169413127,0.19213614757559272,0.07785635192243455,0.19894900124750692,0.08770577666347777,0.18772290543678893,0.07774448277498561,0.2071167113645841,0.08339441428839625,0.19635638892596324,0.06892531245210654,,,,,,,,,,,a13338f530600178689cf085a337667882704cc2bbe48b04ac9a60c9a1fac007
+ji2025_chili,pooled,pooled,broadcast:conditions_pooled_pseudo.npz@089c6d4f,,T cell,3021.0,0.6253512240199055,0.007430089599240803,0.5906799696360686,0.00630678274048339,0.6223670919491346,0.5887999826878811,0.6318587492063952,0.5821201058102289,0.6331519213165464,0.5914252338939027,0.6149667002592526,0.5913590203492562,0.6244116573681988,0.5996955054390742,,,,,,,,,,,089c6d4f328f65deb73b241d2af56486080abd47009d0bae660526bd3ae2269b
+ji2025_chili,pooled,pooled,broadcast:conditions_pooled_pseudo.npz@089c6d4f,,B cell,3245.0,0.3846307218114196,0.018960529950503194,0.3247672901321909,0.022555214941320074,0.39212958813635906,0.33249005066381193,0.3662946467380566,0.3188415902503801,0.39246924289983154,0.33128951608428153,0.40826175855075525,0.35112855146008576,0.3639983727320954,0.29008674220239533,,,,,,,,,,,089c6d4f328f65deb73b241d2af56486080abd47009d0bae660526bd3ae2269b
+ji2025_chili,pooled,pooled,broadcast:conditions_pooled_pseudo.npz@089c6d4f,,Monocyte,3154.0,0.648834499793846,0.015412378947981335,0.4399480211646135,0.01790834396139975,0.665292145693642,0.4542478886686561,0.6308983324014643,0.43415546498118424,0.6568101066440667,0.4373917664526733,0.6339050083874503,0.41438318963446097,0.6572669058426066,0.45956179608609293,,,,,,,,,,,089c6d4f328f65deb73b241d2af56486080abd47009d0bae660526bd3ae2269b
+ji2025_chili,pooled,pooled,broadcast:conditions_pooled_pseudo.npz@089c6d4f,,NK cell,3051.0,0.6633898756878687,0.00301929015124411,0.5718986225423205,0.006725996519921142,0.6657091439539939,0.5692922734923063,0.6602064049077757,0.5728012921557762,0.6601217211013366,0.5654153747633505,0.6645254795320524,0.5829850418400164,0.6663866289441849,0.5689991304601526,,,,,,,,,,,089c6d4f328f65deb73b241d2af56486080abd47009d0bae660526bd3ae2269b
+ji2025_chili,pooled,pooled,split_half_A_vs_B,,mean4,,0.8933460729084324,0.003023938509812342,0.7836746479091096,0.005121460495978445,0.8913282209869264,0.7790058887457331,0.8947427867883905,0.79089102056385,0.8974695844469502,0.7865810101878563,0.889669058683188,0.7829128847547115,0.8935207136367067,0.7789824352933968,0.9418625156081898,0.9702277814744693,0.8734115751941388,0.9336448090525581,,,,,,,
+ji2025_chili,pooled,pooled,generated:pseudo_full__cal,pseudo_full__cal,mean4,,0.2406132386350377,0.004080745075807575,0.18184890176678498,0.004037426079296318,0.24301764575211854,0.1830201272718494,0.23508361738672118,0.1751876067323372,0.2451394254653117,0.18608779274670995,0.24200849884535558,0.18306934230126498,0.23781700572568154,0.18187963978176347,,,,,,,,,,,
+ji2025_chili,pooled,pooled,generated:pseudo_full__raw,pseudo_full__raw,mean4,,0.15305801437089922,0.0023600702615512925,0.10818429005071384,0.004197151654174819,0.15475798908789562,0.1130228307785986,0.15569314671979992,0.11206424593270775,0.15071175573269838,0.10342889102266857,0.15363889987131027,0.10707792777518975,0.150488280442792,0.10532755474440453,,,,,,,,,,,
+ji2025_chili,pooled,pooled,generated:real_lora__raw,real_lora__raw,mean4,,0.4718551446054381,0.004186695437870909,0.3671525339148657,0.003791334851968381,0.47300749083388777,0.37142292574853664,0.468882077003758,0.3628030607239834,0.46811302757858847,0.36371073625892913,0.4785398071099772,0.369984992724132,0.4707333205009789,0.3678409541187473,,,,,,,,,,,
+ji2025_chili,pooled,pooled,generated:zs__cal,zs__cal,mean4,,0.1385527091003339,0.0018323082993583876,0.11086887390857092,0.0025187226237204582,0.13719564683042934,0.11219130417394843,0.13876890651679982,0.11032330683959779,0.13835414066939963,0.11171715613167361,0.14152509650762105,0.1133189119509702,0.13691975497741968,0.10679369044666458,,,,,,,,,,,
+ji2025_chili,pooled,pooled,generated:zs__pseudo,zs__pseudo,mean4,,0.13997602077209473,0.0032611036622875495,0.1157606604425879,0.0045875168084589845,0.14316501241704177,0.12101117369657932,0.13841705485507788,0.1135178346333806,0.1356007784806581,0.11237558206237641,0.14322323485824098,0.12042446022369713,0.13947402324945485,0.1114742515969061,,,,,,,,,,,
+ji2025_chili,pooled,pooled,generated:zs__raw,zs__raw,mean4,,0.08396213323162124,0.0026730527453355316,0.07060335566101025,0.0021299399802386025,0.08447835970023732,0.07195900794908684,0.08631379274440117,0.07131734377283427,0.08219393337392765,0.06813227018694329,0.0864987822047797,0.07299635585315346,0.08032579813476044,0.06861180054303341,,,,,,,,,,,
+ji2025_chili,pooled,pooled,broadcast:conditions_pooled_cal.npz@b0274507,,mean4,,0.20242294662813648,0.0026500005223804414,0.10916770028875337,0.002376500974607626,0.20222289210182717,0.11158571583798396,0.1996280977080698,0.10841794117286906,0.20104882184586564,0.10836882114943464,0.2067058394054238,0.11148673396635295,0.20250908207949592,0.10597928931712632,,,,,,,,,,,b02745073ef16c9a53a1bc7befa99b01126c443cbb34cffc952d44dc525b4c79
+ji2025_chili,pooled,pooled,broadcast:conditions_pooled_raw.npz@a13338f5,,mean4,,0.23420492618112912,0.003645011959017163,0.10979389912316875,0.002395891597825257,0.23495236034320893,0.11232237034227338,0.23159032005288213,0.10869692797000226,0.23031654445615093,0.10803711280948575,0.2397347695895947,0.11242893684074673,0.23443063646380896,0.10748414765333562,,,,,,,,,,,a13338f530600178689cf085a337667882704cc2bbe48b04ac9a60c9a1fac007
+ji2025_chili,pooled,pooled,broadcast:conditions_pooled_pseudo.npz@089c6d4f,,mean4,,0.5805515803282599,0.005789600207293183,0.48182347586879837,0.003799643324106789,0.5863744924332824,0.48620754887816386,0.572314533313423,0.47697961329939237,0.5856382479904453,0.481380472798552,0.5804147366823776,0.48496395082095484,0.5780158912217714,0.47958579354692876,,,,,,,,,,,089c6d4f328f65deb73b241d2af56486080abd47009d0bae660526bd3ae2269b

paper-releases/pbisc-diffusion/updates/20261013T115045Z-figure-strengthening-154/diffusion/dataset/server_1/model8/presentations/2026-09-30--paper-summary--r00/data/strengthening_20261013/disease_metrics/source_snapshot/plans/paired_finetune_intradataset_20260927/scores_contrast/ji2025_chili/pooled/contrast.csv

@@ -0,0 +1,61 @@
+dataset,design,unit,arm,celltype,statistic,label,n_genes,pearson_r_generated,spearman_r_generated,pearson_r_broadcast,spearman_r_broadcast,partial_r_generated_given_broadcast,r_generated_vs_broadcast,condition,condition_sha256,pearson_r_generated_scorer,pearson_r_broadcast_scorer,partial_r_generated_given_broadcast_scorer,r_generated_vs_broadcast_scorer
+ji2025_chili,pooled,pooled,pseudo_full__cal,T cell,mean_cp10k,sc-only fine-tune (+ calibration),3021.0,0.41748403615814483,0.3634214976595752,0.17674393668293117,0.10675398317546071,0.3960736120833449,0.20179144395055235,conditions_pooled_cal.npz@b0274507,b02745073ef16c9a53a1bc7befa99b01126c443cbb34cffc952d44dc525b4c79,0.4174840361581448,0.1767439366829311,0.3960736120833449,0.2017914439505523
+ji2025_chili,pooled,pooled,pseudo_full__cal,T cell,pseudobulk_log1p_cpm,sc-only fine-tune (+ calibration),3021.0,0.15205634073469254,0.16368312272075516,0.2523132593022563,0.21526640993230006,0.12366480679036315,0.13256855841778983,conditions_pooled_cal.npz@b0274507,b02745073ef16c9a53a1bc7befa99b01126c443cbb34cffc952d44dc525b4c79,0.1520563407346925,0.2523132593022563,0.1236648067903631,0.1325685584177898
+ji2025_chili,pooled,pooled,pseudo_full__cal,B cell,mean_cp10k,sc-only fine-tune (+ calibration),3245.0,0.09385053042713425,0.09187867058412083,0.1024575344118176,0.03110895632984182,0.08430967513677497,0.10169413644345374,conditions_pooled_cal.npz@b0274507,b02745073ef16c9a53a1bc7befa99b01126c443cbb34cffc952d44dc525b4c79,0.0938505304271342,0.1024575344118176,0.0843096751367749,0.1016941364434537
+ji2025_chili,pooled,pooled,pseudo_full__cal,B cell,pseudobulk_log1p_cpm,sc-only fine-tune (+ calibration),3245.0,-0.006096072361365578,0.0024575066256168478,0.013773872762473344,0.012279763677448464,-0.006969837241406956,0.0624022976010161,conditions_pooled_cal.npz@b0274507,b02745073ef16c9a53a1bc7befa99b01126c443cbb34cffc952d44dc525b4c79,-0.0060960723613655,0.0137738727624733,-0.0069698372414069,0.0624022976010161
+ji2025_chili,pooled,pooled,pseudo_full__cal,Monocyte,mean_cp10k,sc-only fine-tune (+ calibration),3154.0,0.3518034728245824,0.18729214756139453,0.3949663904641741,0.23457153866102914,0.27832617970138385,0.26679364031683495,conditions_pooled_cal.npz@b0274507,b02745073ef16c9a53a1bc7befa99b01126c443cbb34cffc952d44dc525b4c79,0.3518034728245824,0.3949663904641741,0.2783261797013838,0.2667936403168349
+ji2025_chili,pooled,pooled,pseudo_full__cal,Monocyte,pseudobulk_log1p_cpm,sc-only fine-tune (+ calibration),3154.0,0.16739897966849077,0.15336374688640436,0.34248293299261356,0.23760830992284476,0.12572884082104344,0.14765245128835525,conditions_pooled_cal.npz@b0274507,b02745073ef16c9a53a1bc7befa99b01126c443cbb34cffc952d44dc525b4c79,0.1673989796684907,0.3424829329926135,0.1257288408210434,0.1476524512883552
+ji2025_chili,pooled,pooled,pseudo_full__cal,NK cell,mean_cp10k,sc-only fine-tune (+ calibration),3051.0,0.11812038737674825,0.10635753382312765,0.15172667727761166,0.06942460946824647,0.11513060830727838,0.02880121720963319,conditions_pooled_cal.npz@b0274507,b02745073ef16c9a53a1bc7befa99b01126c443cbb34cffc952d44dc525b4c79,0.1181203873767482,0.1517266772776116,0.1151306083072783,0.0288012172096331
+ji2025_chili,pooled,pooled,pseudo_full__cal,NK cell,pseudobulk_log1p_cpm,sc-only fine-tune (+ calibration),3051.0,0.03564036268856148,0.04479414109071232,0.08855201683792482,0.06742106067916549,0.03379701806060018,0.02241134386746601,conditions_pooled_cal.npz@b0274507,b02745073ef16c9a53a1bc7befa99b01126c443cbb34cffc952d44dc525b4c79,0.0356403626885614,0.0885520168379248,0.0337970180606001,0.022411343867466
+ji2025_chili,pooled,pooled,pseudo_full__raw,T cell,mean_cp10k,"sc-only fine-tune, real bulk",3021.0,0.25569910635710147,0.1791704007408772,0.22039608693345034,0.09749861429165937,0.2143849230133777,0.2388303543930888,conditions_pooled_raw.npz@a13338f5,a13338f530600178689cf085a337667882704cc2bbe48b04ac9a60c9a1fac007,0.2556991063571014,0.2203960869334503,0.2143849230133777,0.2388303543930888
+ji2025_chili,pooled,pooled,pseudo_full__raw,T cell,pseudobulk_log1p_cpm,"sc-only fine-tune, real bulk",3021.0,0.11582419649596681,0.1287770351375368,0.27145331834905573,0.22332017952502015,0.09033771466790265,0.10826761446500456,conditions_pooled_raw.npz@a13338f5,a13338f530600178689cf085a337667882704cc2bbe48b04ac9a60c9a1fac007,0.1158241964959668,0.2714533183490557,0.0903377146679026,0.1082676144650045
+ji2025_chili,pooled,pooled,pseudo_full__raw,B cell,mean_cp10k,"sc-only fine-tune, real bulk",3245.0,-0.028129073829697312,-0.011268394509367327,0.13326750229861392,0.03318867346587475,-0.03734716490341007,0.06606335653526038,conditions_pooled_raw.npz@a13338f5,a13338f530600178689cf085a337667882704cc2bbe48b04ac9a60c9a1fac007,-0.0281290738296973,0.1332675022986139,-0.03734716490341,0.0660633565352603
+ji2025_chili,pooled,pooled,pseudo_full__raw,B cell,pseudobulk_log1p_cpm,"sc-only fine-tune, real bulk",3245.0,-0.04164734305587784,-0.05744036350310779,0.01993963216355321,0.014957835373367154,-0.04278822457129252,0.05369505876542711,conditions_pooled_raw.npz@a13338f5,a13338f530600178689cf085a337667882704cc2bbe48b04ac9a60c9a1fac007,-0.0416473430558778,0.0199396321635532,-0.0427882245712925,0.0536950587654271
+ji2025_chili,pooled,pooled,pseudo_full__raw,Monocyte,mean_cp10k,"sc-only fine-tune, real bulk",3154.0,0.3451046208257109,0.2500364150827939,0.3983317004681723,0.23043456016556318,0.24990560118753583,0.3214587929493358,conditions_pooled_raw.npz@a13338f5,a13338f530600178689cf085a337667882704cc2bbe48b04ac9a60c9a1fac007,0.3451046208257109,0.3983317004681723,0.2499056011875358,0.3214587929493358
+ji2025_chili,pooled,pooled,pseudo_full__raw,Monocyte,pseudobulk_log1p_cpm,"sc-only fine-tune, real bulk",3154.0,0.1858464711279237,0.19312424901984593,0.35676796217145185,0.23555570709826826,0.1423632181309128,0.15250061628421407,conditions_pooled_raw.npz@a13338f5,a13338f530600178689cf085a337667882704cc2bbe48b04ac9a60c9a1fac007,0.1858464711279237,0.3567679621714518,0.1423632181309128,0.152500616284214
+ji2025_chili,pooled,pooled,pseudo_full__raw,NK cell,mean_cp10k,"sc-only fine-tune, real bulk",3051.0,0.039882925913029076,0.015279177819318429,0.20750320008350984,0.08103662629740357,0.019479213974523544,0.10084096466677074,conditions_pooled_raw.npz@a13338f5,a13338f530600178689cf085a337667882704cc2bbe48b04ac9a60c9a1fac007,0.039882925913029,0.2075032000835098,0.0194792139745235,0.1008409646667707
+ji2025_chili,pooled,pooled,pseudo_full__raw,NK cell,pseudobulk_log1p_cpm,"sc-only fine-tune, real bulk",3051.0,0.016395122150654768,0.017741763491015458,0.10364196133517908,0.07837401366094673,0.010559104108651482,0.05702295431467306,conditions_pooled_raw.npz@a13338f5,a13338f530600178689cf085a337667882704cc2bbe48b04ac9a60c9a1fac007,0.0163951221506547,0.103641961335179,0.0105591041086514,0.057022954314673
+ji2025_chili,pooled,pooled,real_lora__raw,T cell,mean_cp10k,"LoRA, all training pairs",3021.0,0.4777012852164884,0.4276987198750023,0.22039608693345034,0.09749861429165937,0.4472579925880059,0.2518190487522858,conditions_pooled_raw.npz@a13338f5,a13338f530600178689cf085a337667882704cc2bbe48b04ac9a60c9a1fac007,0.4777012852164884,0.2203960869334503,0.4472579925880059,0.2518190487522858
+ji2025_chili,pooled,pooled,real_lora__raw,T cell,pseudobulk_log1p_cpm,"LoRA, all training pairs",3021.0,0.38140789055483587,0.3455023596107812,0.27145331834905573,0.22332017952502015,0.3581307894343256,0.1495716471617274,conditions_pooled_raw.npz@a13338f5,a13338f530600178689cf085a337667882704cc2bbe48b04ac9a60c9a1fac007,0.3814078905548358,0.2714533183490557,0.3581307894343256,0.1495716471617274
+ji2025_chili,pooled,pooled,real_lora__raw,B cell,mean_cp10k,"LoRA, all training pairs",3245.0,0.23787071318293912,0.17073435810612442,0.13326750229861392,0.03318867346587475,0.22143352853922035,0.15914950123801289,conditions_pooled_raw.npz@a13338f5,a13338f530600178689cf085a337667882704cc2bbe48b04ac9a60c9a1fac007,0.2378707131829391,0.1332675022986139,0.2214335285392203,0.1591495012380128
+ji2025_chili,pooled,pooled,real_lora__raw,B cell,pseudobulk_log1p_cpm,"LoRA, all training pairs",3245.0,0.084516552129008,0.035825851660608365,0.01993963216355321,0.014957835373367154,0.08300274284422675,0.09594910885744622,conditions_pooled_raw.npz@a13338f5,a13338f530600178689cf085a337667882704cc2bbe48b04ac9a60c9a1fac007,0.084516552129008,0.0199396321635532,0.0830027428442267,0.0959491088574462
+ji2025_chili,pooled,pooled,real_lora__raw,Monocyte,mean_cp10k,"LoRA, all training pairs",3154.0,0.7884995988650637,0.6041244928900509,0.3983317004681723,0.23043456016556318,0.7560668237859541,0.3461060542845116,conditions_pooled_raw.npz@a13338f5,a13338f530600178689cf085a337667882704cc2bbe48b04ac9a60c9a1fac007,0.7884995988650637,0.3983317004681723,0.7560668237859541,0.3461060542845116
+ji2025_chili,pooled,pooled,real_lora__raw,Monocyte,pseudobulk_log1p_cpm,"LoRA, all training pairs",3154.0,0.6402692067592803,0.5637973657916842,0.35676796217145185,0.23555570709826826,0.6055374930961666,0.26629953739166756,conditions_pooled_raw.npz@a13338f5,a13338f530600178689cf085a337667882704cc2bbe48b04ac9a60c9a1fac007,0.6402692067592803,0.3567679621714518,0.6055374930961666,0.2662995373916675
+ji2025_chili,pooled,pooled,real_lora__raw,NK cell,mean_cp10k,"LoRA, all training pairs",3051.0,0.41308033634451113,0.3095184879325972,0.20750320008350984,0.08103662629740357,0.383416573647524,0.23286417403200968,conditions_pooled_raw.npz@a13338f5,a13338f530600178689cf085a337667882704cc2bbe48b04ac9a60c9a1fac007,0.4130803363445111,0.2075032000835098,0.383416573647524,0.2328641740320096
+ji2025_chili,pooled,pooled,real_lora__raw,NK cell,pseudobulk_log1p_cpm,"LoRA, all training pairs",3051.0,0.20451810797689138,0.18315913043443638,0.10364196133517908,0.07837401366094673,0.19657353029300817,0.09548819739528998,conditions_pooled_raw.npz@a13338f5,a13338f530600178689cf085a337667882704cc2bbe48b04ac9a60c9a1fac007,0.2045181079768913,0.103641961335179,0.1965735302930081,0.0954881973952899
+ji2025_chili,pooled,pooled,zs__cal,T cell,mean_cp10k,Zero-shot + calibration,3021.0,0.22784481657703645,0.2011309729145801,0.17674393668293117,0.10675398317546071,0.20253993886317634,0.17954149011850326,conditions_pooled_cal.npz@b0274507,b02745073ef16c9a53a1bc7befa99b01126c443cbb34cffc952d44dc525b4c79,0.2278448165770364,0.1767439366829311,0.2025399388631763,0.1795414901185032
+ji2025_chili,pooled,pooled,zs__cal,T cell,pseudobulk_log1p_cpm,Zero-shot + calibration,3021.0,0.10718080051592614,0.1336266082493961,0.2523132593022563,0.21526640993230006,0.0837495564293202,0.10539381435430445,conditions_pooled_cal.npz@b0274507,b02745073ef16c9a53a1bc7befa99b01126c443cbb34cffc952d44dc525b4c79,0.1071808005159261,0.2523132593022563,0.0837495564293202,0.1053938143543044
+ji2025_chili,pooled,pooled,zs__cal,B cell,mean_cp10k,Zero-shot + calibration,3245.0,0.0040674988711935514,0.007175333403493379,0.1024575344118176,0.03110895632984182,-0.0019787809642532387,0.058877578827299486,conditions_pooled_cal.npz@b0274507,b02745073ef16c9a53a1bc7befa99b01126c443cbb34cffc952d44dc525b4c79,0.0040674988711935,0.1024575344118176,-0.0019787809642532,0.0588775788272994
+ji2025_chili,pooled,pooled,zs__cal,B cell,pseudobulk_log1p_cpm,Zero-shot + calibration,3245.0,0.0072423318492938395,-0.01002241759156311,0.013773872762473344,0.012279763677448464,0.006302371780262407,0.06938839882175779,conditions_pooled_cal.npz@b0274507,b02745073ef16c9a53a1bc7befa99b01126c443cbb34cffc952d44dc525b4c79,0.0072423318492938,0.0137738727624733,0.0063023717802624,0.0693883988217577
+ji2025_chili,pooled,pooled,zs__cal,Monocyte,mean_cp10k,Zero-shot + calibration,3154.0,0.2097285886787058,0.136377986944172,0.3949663904641741,0.23457153866102914,0.13860667972046203,0.21623041579197352,conditions_pooled_cal.npz@b0274507,b02745073ef16c9a53a1bc7befa99b01126c443cbb34cffc952d44dc525b4c79,0.2097285886787058,0.3949663904641741,0.138606679720462,0.2162304157919735
+ji2025_chili,pooled,pooled,zs__cal,Monocyte,pseudobulk_log1p_cpm,Zero-shot + calibration,3154.0,0.0971099648479326,0.10944253573403875,0.34248293299261356,0.23760830992284476,0.050036248863003646,0.14779114393494183,conditions_pooled_cal.npz@b0274507,b02745073ef16c9a53a1bc7befa99b01126c443cbb34cffc952d44dc525b4c79,0.0971099648479326,0.3424829329926135,0.0500362488630036,0.1477911439349418
+ji2025_chili,pooled,pooled,zs__cal,NK cell,mean_cp10k,Zero-shot + calibration,3051.0,0.12602694412187967,0.1119116252663098,0.15172667727761166,0.06942460946824647,0.11193392875308823,0.10549431754735594,conditions_pooled_cal.npz@b0274507,b02745073ef16c9a53a1bc7befa99b01126c443cbb34cffc952d44dc525b4c79,0.1260269441218796,0.1517266772776116,0.1119339287530882,0.1054943175473559
+ji2025_chili,pooled,pooled,zs__cal,NK cell,pseudobulk_log1p_cpm,Zero-shot + calibration,3051.0,0.0330336811247439,0.027950986093056743,0.08855201683792482,0.06742106067916549,0.02700833828461455,0.06998608293472333,conditions_pooled_cal.npz@b0274507,b02745073ef16c9a53a1bc7befa99b01126c443cbb34cffc952d44dc525b4c79,0.0330336811247439,0.0885520168379248,0.0270083382846145,0.0699860829347233
+ji2025_chili,pooled,pooled,zs__pseudo,T cell,mean_cp10k,"Zero-shot, sc pseudobulk input (reference)",3021.0,0.2775094568613017,0.35969623863764055,0.6336395973954806,0.5978070125023259,0.03813351968596109,0.3951926807665516,conditions_pooled_pseudo.npz@089c6d4f,089c6d4f328f65deb73b241d2af56486080abd47009d0bae660526bd3ae2269b,0.2775094568613017,0.6336395973954806,0.038133519685961,0.3951926807665516
+ji2025_chili,pooled,pooled,zs__pseudo,T cell,pseudobulk_log1p_cpm,"Zero-shot, sc pseudobulk input (reference)",3021.0,0.22230591569329533,0.26075915144527334,0.7204920235096586,0.6954741422487309,0.00886934251960649,0.30040504216898556,conditions_pooled_pseudo.npz@089c6d4f,089c6d4f328f65deb73b241d2af56486080abd47009d0bae660526bd3ae2269b,0.2223059156932953,0.7204920235096586,0.0088693425196064,0.3004050421689855
+ji2025_chili,pooled,pooled,zs__pseudo,B cell,mean_cp10k,"Zero-shot, sc pseudobulk input (reference)",3245.0,-0.060714437894734095,-0.07675987117238674,0.40668994961336546,0.3507561668286436,-0.10797136321049584,0.09221825216539534,conditions_pooled_pseudo.npz@089c6d4f,089c6d4f328f65deb73b241d2af56486080abd47009d0bae660526bd3ae2269b,-0.060714437894734,0.4066899496133654,-0.1079713632104958,0.0922182521653953
+ji2025_chili,pooled,pooled,zs__pseudo,B cell,pseudobulk_log1p_cpm,"Zero-shot, sc pseudobulk input (reference)",3245.0,-0.010352848617248141,-0.005230982279668281,0.32383229308884603,0.2685886645190075,-0.026325162822131896,0.044864859366677265,conditions_pooled_pseudo.npz@089c6d4f,089c6d4f328f65deb73b241d2af56486080abd47009d0bae660526bd3ae2269b,-0.0103528486172481,0.323832293088846,-0.0263251628221318,0.0448648593666772
+ji2025_chili,pooled,pooled,zs__pseudo,Monocyte,mean_cp10k,"Zero-shot, sc pseudobulk input (reference)",3154.0,0.3169823582660542,0.20483739638627482,0.6585340702956617,0.4602385845158692,0.22664352271600238,0.22924204318118893,conditions_pooled_pseudo.npz@089c6d4f,089c6d4f328f65deb73b241d2af56486080abd47009d0bae660526bd3ae2269b,0.3169823582660542,0.6585340702956617,0.2266435227160023,0.2292420431811889
+ji2025_chili,pooled,pooled,zs__pseudo,Monocyte,pseudobulk_log1p_cpm,"Zero-shot, sc pseudobulk input (reference)",3154.0,0.22230782405308022,0.16680748638812817,0.7535979134665707,0.6204129824174409,0.07156311725286589,0.234311128245258,conditions_pooled_pseudo.npz@089c6d4f,089c6d4f328f65deb73b241d2af56486080abd47009d0bae660526bd3ae2269b,0.2223078240530802,0.7535979134665707,0.0715631172528658,0.234311128245258
+ji2025_chili,pooled,pooled,zs__pseudo,NK cell,mean_cp10k,"Zero-shot, sc pseudobulk input (reference)",3051.0,0.03059238466538905,-0.01938625797377867,0.6937501116110201,0.6163568255709067,-0.02841264409889348,0.07351386209717115,conditions_pooled_pseudo.npz@089c6d4f,089c6d4f328f65deb73b241d2af56486080abd47009d0bae660526bd3ae2269b,0.030592384665389,0.6937501116110201,-0.0284126440988934,0.0735138620971711
+ji2025_chili,pooled,pooled,zs__pseudo,NK cell,pseudobulk_log1p_cpm,"Zero-shot, sc pseudobulk input (reference)",3051.0,0.0907603847385027,0.06389270870576774,0.5618654574154968,0.5045687722274393,0.056719297251803955,0.07828305941175151,conditions_pooled_pseudo.npz@089c6d4f,089c6d4f328f65deb73b241d2af56486080abd47009d0bae660526bd3ae2269b,0.0907603847385027,0.5618654574154968,0.0567192972518039,0.0782830594117515
+ji2025_chili,pooled,pooled,zs__raw,T cell,mean_cp10k,"Zero-shot, real bulk",3021.0,0.1753830657822015,0.16640716910858175,0.22039608693345034,0.09749861429165937,0.13233336960738398,0.22512775502859314,conditions_pooled_raw.npz@a13338f5,a13338f530600178689cf085a337667882704cc2bbe48b04ac9a60c9a1fac007,0.1753830657822015,0.2203960869334503,0.1323333696073839,0.2251277550285931
+ji2025_chili,pooled,pooled,zs__raw,T cell,pseudobulk_log1p_cpm,"Zero-shot, real bulk",3021.0,0.050111060225367106,0.07882690588170571,0.27145331834905573,0.22332017952502015,0.027647790178760453,0.08694744914876093,conditions_pooled_raw.npz@a13338f5,a13338f530600178689cf085a337667882704cc2bbe48b04ac9a60c9a1fac007,0.0501110602253671,0.2714533183490557,0.0276477901787604,0.0869474491487609
+ji2025_chili,pooled,pooled,zs__raw,B cell,mean_cp10k,"Zero-shot, real bulk",3245.0,-0.0756438235538274,-0.03900627561275206,0.13326750229861392,0.03318867346587475,-0.09681141258159266,0.14477085731948788,conditions_pooled_raw.npz@a13338f5,a13338f530600178689cf085a337667882704cc2bbe48b04ac9a60c9a1fac007,-0.0756438235538274,0.1332675022986139,-0.0968114125815926,0.1447708573194878
+ji2025_chili,pooled,pooled,zs__raw,B cell,pseudobulk_log1p_cpm,"Zero-shot, real bulk",3245.0,-0.059632755932278354,-0.06866920825741898,0.01993963216355321,0.014957835373367154,-0.061343681984259615,0.0762410939937116,conditions_pooled_raw.npz@a13338f5,a13338f530600178689cf085a337667882704cc2bbe48b04ac9a60c9a1fac007,-0.0596327559322783,0.0199396321635532,-0.0613436819842596,0.0762410939937116
+ji2025_chili,pooled,pooled,zs__raw,Monocyte,mean_cp10k,"Zero-shot, real bulk",3154.0,0.21552642534596397,0.1604869605027681,0.3983317004681723,0.23043456016556318,0.10703820799566857,0.3064542220325279,conditions_pooled_raw.npz@a13338f5,a13338f530600178689cf085a337667882704cc2bbe48b04ac9a60c9a1fac007,0.2155264253459639,0.3983317004681723,0.1070382079956685,0.3064542220325279
+ji2025_chili,pooled,pooled,zs__raw,Monocyte,pseudobulk_log1p_cpm,"Zero-shot, real bulk",3154.0,0.14613547009275052,0.13134974897706841,0.35676796217145185,0.23555570709826826,0.10184944275767138,0.14576614002741575,conditions_pooled_raw.npz@a13338f5,a13338f530600178689cf085a337667882704cc2bbe48b04ac9a60c9a1fac007,0.1461354700927505,0.3567679621714518,0.1018494427576713,0.1457661400274157
+ji2025_chili,pooled,pooled,zs__raw,NK cell,mean_cp10k,"Zero-shot, real bulk",3051.0,0.018823660772965572,-0.013497730398371164,0.20750320008350984,0.08103662629740357,-0.011116033621459586,0.14258403133193717,conditions_pooled_raw.npz@a13338f5,a13338f530600178689cf085a337667882704cc2bbe48b04ac9a60c9a1fac007,0.0188236607729655,0.2075032000835098,-0.0111160336214595,0.1425840313319371
+ji2025_chili,pooled,pooled,zs__raw,NK cell,pseudobulk_log1p_cpm,"Zero-shot, real bulk",3051.0,0.019664675864152856,0.017586102866975806,0.10364196133517908,0.07837401366094673,0.009247649986953904,0.10144810674182453,conditions_pooled_raw.npz@a13338f5,a13338f530600178689cf085a337667882704cc2bbe48b04ac9a60c9a1fac007,0.0196646758641528,0.103641961335179,0.0092476499869539,0.1014481067418245
+ji2025_chili,pooled,pooled,pseudo_full__cal,mean4,mean_cp10k,sc-only fine-tune (+ calibration),,0.24531460669665245,0.18723746240705455,0.20647363470913363,0.11046477190864454,0.21846001880719554,0.14977010948011854,,,0.2453146066966524,0.2064736347091336,0.21846001880719546,0.1497701094801185
+ji2025_chili,pooled,pooled,pseudo_full__cal,mean4,pseudobulk_log1p_cpm,sc-only fine-tune (+ calibration),,0.08724990268259479,0.09107462933087218,0.17428052047381698,0.1331438860529397,0.06905520710764995,0.0912586627936568,,,0.08724990268259478,0.17428052047381698,0.06905520710764992,0.09125866279365677
+ji2025_chili,pooled,pooled,pseudo_full__raw,mean4,mean_cp10k,"sc-only fine-tune, real bulk",,0.15313939481653605,0.10830439978340554,0.2398746224459366,0.11053961855512523,0.11160564331800676,0.18179836713611391,,,0.15313939481653602,0.23987462244593655,0.11160564331800675,0.18179836713611391
+ji2025_chili,pooled,pooled,pseudo_full__raw,mean4,pseudobulk_log1p_cpm,"sc-only fine-tune, real bulk",,0.06910461167966686,0.07055067103632261,0.18795071850481,0.13805193391440057,0.050117953084043605,0.09287156095732971,,,0.06910461167966685,0.1879507185048099,0.05011795308404357,0.09287156095732965
+ji2025_chili,pooled,pooled,real_lora__raw,mean4,mean_cp10k,"LoRA, all training pairs",,0.47928798340225065,0.3780190147009437,0.2398746224459366,0.11053961855512523,0.45204372964017614,0.24748469457670497,,,0.4792879834022506,0.23987462244593655,0.45204372964017614,0.24748469457670497
+ji2025_chili,pooled,pooled,real_lora__raw,mean4,pseudobulk_log1p_cpm,"LoRA, all training pairs",,0.3276779393550039,0.28207117687437755,0.18795071850481,0.13805193391440057,0.3108111389169318,0.15182712270153279,,,0.3276779393550039,0.1879507185048099,0.31081113891693174,0.15182712270153276
+ji2025_chili,pooled,pooled,zs__cal,mean4,mean_cp10k,Zero-shot + calibration,,0.14191696206220386,0.11414897963213883,0.20647363470913363,0.11046477190864454,0.11277544159311834,0.14003595057128304,,,0.14191696206220383,0.2064736347091336,0.11277544159311834,0.140035950571283
+ji2025_chili,pooled,pooled,zs__cal,mean4,pseudobulk_log1p_cpm,Zero-shot + calibration,,0.06114169458447412,0.06524942812123212,0.17428052047381698,0.1331438860529397,0.0417741288393002,0.09813986001143185,,,0.0611416945844741,0.17428052047381698,0.04177412883930017,0.0981398600114318
+ji2025_chili,pooled,pooled,zs__pseudo,mean4,mean_cp10k,"Zero-shot, sc pseudobulk input (reference)",,0.1410924404745027,0.11709687646943748,0.598153432228882,0.5062896473544363,0.03209825877314353,0.19754170955257674,,,0.14109244047450273,0.598153432228882,0.03209825877314352,0.19754170955257674
+ji2025_chili,pooled,pooled,zs__pseudo,mean4,pseudobulk_log1p_cpm,"Zero-shot, sc pseudobulk input (reference)",,0.13125531896690754,0.12155709106487524,0.589946921870143,0.5222611403531546,0.02770664855053611,0.1644660222981681,,,0.1312553189669075,0.589946921870143,0.027706648550536075,0.16446602229816806
+ji2025_chili,pooled,pooled,zs__raw,mean4,mean_cp10k,"Zero-shot, real bulk",,0.08352233208682591,0.06859753090005666,0.2398746224459366,0.11053961855512523,0.03286103285000008,0.20473421642813652,,,0.08352233208682587,0.23987462244593655,0.032861032850000076,0.2047342164281365
+ji2025_chili,pooled,pooled,zs__raw,mean4,pseudobulk_log1p_cpm,"Zero-shot, real bulk",,0.03906961256249803,0.03977338736708274,0.18795071850481,0.13805193391440057,0.019350300234781532,0.1026006974779282,,,0.039069612562498024,0.1879507185048099,0.0193503002347815,0.10260069747792816