Archive 4 checkpoints (1-4)

paper-releases/pbisc-diffusion/updates/20261005T133325Z-deck-scratch-samepairs-tracking/diffusion/dataset/server_1/model8/presentations/2026-09-30--paper-summary--r00/data/sec07_no_pretraining.csv

@@ -0,0 +1,8 @@
+group,arm,score_arm,comp_l1,coverage,logfc_r,comp_r,minutes,selected_step,steps_run,train_rows,source
+5 pairs,pre,lora_n5__raw,0.362681,0.809804,0.23267,0.700884,3.155,2750,4750,5,/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/scores/ye2026_sepsis/fold0_scratch_20261005/summary.json; per_donor.csv; /home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/runs/ye2026_sepsis/fold0/lora_n5/RUN.json
+58 pairs,pre,real_lora__raw,0.373248,0.858431,0.486854,0.770692,5.405,6500,8500,58,/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/scores/ye2026_sepsis/fold0_scratch_20261005/summary.json; per_donor.csv; /home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/runs/ye2026_sepsis/fold0/real_lora/RUN.json
+58 + recipes pairs,pre,lora_recipe__raw,0.385175,0.866275,0.448495,0.804811,4.50333,3750,5750,58,/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/scores/ye2026_sepsis/fold0_scratch_20261005/summary.json; per_donor.csv; /home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/runs/ye2026_sepsis/fold0/lora_recipe/RUN.json
+5 pairs,scratch,scratch_n5__raw,0.448277,0.798039,0.17899,0.170937,61.0383,66000,76000,5,/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/scores/ye2026_sepsis/fold0_scratch_20261005/summary.json; per_donor.csv; /home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/runs/ye2026_sepsis/fold0/scratch_n5/RUN.json
+58 pairs,scratch,scratch_full__raw,0.398341,0.861961,0.57743,0.679433,78.975,100000,100000,58,/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/scores/ye2026_sepsis/fold0_scratch_20261005/summary.json; per_donor.csv; /home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/runs/ye2026_sepsis/fold0/scratch_full/RUN.json
+58 + recipes pairs,scratch,scratch_recipe__raw,0.385086,0.877647,0.542661,0.769237,85.9817,100000,100000,58,/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/scores/ye2026_sepsis/fold0_scratch_20261005/summary.json; per_donor.csv; /home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/runs/ye2026_sepsis/fold0/scratch_recipe/RUN.json
+0 pairs,zero-shot,zs__raw,0.450678,0.180784,0.0641713,0.610031,,,,,/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/scores/ye2026_sepsis/fold0_scratch_20261005/summary.json