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  1. paper-releases/pbisc-diffusion/updates/20261013T142727Z-trunk4x-sepsis-results/diffusion/dataset/server_1/model8/plans/trunk4x_lora_sepsis_20261013/scores/draw2/COMPARISON_RECEIPT.json +25 -0
  2. paper-releases/pbisc-diffusion/updates/20261013T142727Z-trunk4x-sepsis-results/diffusion/dataset/server_1/model8/plans/trunk4x_lora_sepsis_20261013/scores/draw2/arms/current_f01/deg_top50_lists.csv +501 -0
  3. paper-releases/pbisc-diffusion/updates/20261013T142727Z-trunk4x-sepsis-results/diffusion/dataset/server_1/model8/plans/trunk4x_lora_sepsis_20261013/scores/draw2/arms/scsemi/deg_top50_lists.csv +435 -0
  4. paper-releases/pbisc-diffusion/updates/20261013T142727Z-trunk4x-sepsis-results/diffusion/dataset/server_1/model8/plans/trunk4x_lora_sepsis_20261013/scores/draw2/arms/trunk4x/deg_top50_lists.csv +501 -0
paper-releases/pbisc-diffusion/updates/20261013T142727Z-trunk4x-sepsis-results/diffusion/dataset/server_1/model8/plans/trunk4x_lora_sepsis_20261013/scores/draw2/COMPARISON_RECEIPT.json ADDED
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+ {
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+ "draw": 2,
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+ "support_sha256": "ea331f967a3a212b91cd144bd8ba62cea3cbfe3bdcc9e77268e190757327b0e2",
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+ "sources": {
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+ "trunk4x": {
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+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/trunk4x_lora_sepsis_20261013/generated/trunk4x/draw2/cells.npz",
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+ "sha256": "d6e31ae844f271afb8f4444fff10e21fc46e3be0acc23bdf4f83230a3d7d88bb"
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+ },
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+ "panel_matched_1x": {
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+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/trunk4x_lora_sepsis_20261013/generated/panel_matched_1x/draw2/cells.npz",
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+ "sha256": "ca5ed4d9d28257200258cb29db411023f90ad702606be1eb790b8645559467a4"
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+ },
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+ "current_f01": {
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+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/generated/ye2026_sepsis/disease/draw2/lora.npz",
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+ "sha256": "ee517a12eea1c5e67a1682caf3a8a6cb72895203214422f9a15ad3db3a950b11"
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+ },
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+ "scsemi": {
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+ "path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/generated/ye2026_sepsis/disease/draw2/scsemi.npz",
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+ "sha256": "6662fd4e121f2bd53d907cfb36f2500a15efab7e36670eb2ce7cecc7f543bc86"
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+ }
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+ "reference_ready_sha256": "8364f8c9d7dc8ed868034811c04d9f2157275a477b351e9e1699d65d99bac5c5",
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+ "score_code_sha256": "ec5f40b4cea6d5062d0138f3b934abb6465e34cbfeac869c8a0906924c033aec",
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+ "note": "Native common-axis readout; donor-aware Welch benchmark DEG. Draws are overlapping, not independent biological replicates."
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+ }
paper-releases/pbisc-diffusion/updates/20261013T142727Z-trunk4x-sepsis-results/diffusion/dataset/server_1/model8/plans/trunk4x_lora_sepsis_20261013/scores/draw2/arms/current_f01/deg_top50_lists.csv ADDED
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paper-releases/pbisc-diffusion/updates/20261013T142727Z-trunk4x-sepsis-results/diffusion/dataset/server_1/model8/plans/trunk4x_lora_sepsis_20261013/scores/draw2/arms/scsemi/deg_top50_lists.csv ADDED
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280
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paper-releases/pbisc-diffusion/updates/20261013T142727Z-trunk4x-sepsis-results/diffusion/dataset/server_1/model8/plans/trunk4x_lora_sepsis_20261013/scores/draw2/arms/trunk4x/deg_top50_lists.csv ADDED
@@ -0,0 +1,501 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
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+ Monocyte,observed,15,ENSG00000115523
217
+ Monocyte,observed,16,ENSG00000153563
218
+ Monocyte,observed,17,ENSG00000137441
219
+ Monocyte,observed,18,ENSG00000139970
220
+ Monocyte,observed,19,ENSG00000147138
221
+ Monocyte,observed,20,ENSG00000073861
222
+ Monocyte,observed,21,ENSG00000160856
223
+ Monocyte,observed,22,ENSG00000100450
224
+ Monocyte,observed,23,ENSG00000184613
225
+ Monocyte,observed,24,ENSG00000153823
226
+ Monocyte,observed,25,ENSG00000134539
227
+ Monocyte,observed,26,ENSG00000120262
228
+ Monocyte,observed,27,ENSG00000081041
229
+ Monocyte,observed,28,ENSG00000013725
230
+ Monocyte,observed,29,ENSG00000180739
231
+ Monocyte,observed,30,ENSG00000163564
232
+ Monocyte,observed,31,ENSG00000198821
233
+ Monocyte,observed,32,ENSG00000186810
234
+ Monocyte,observed,33,ENSG00000183918
235
+ Monocyte,observed,34,ENSG00000138821
236
+ Monocyte,observed,35,ENSG00000152495
237
+ Monocyte,observed,36,ENSG00000172575
238
+ Monocyte,observed,37,ENSG00000101096
239
+ Monocyte,observed,38,ENSG00000129538
240
+ Monocyte,observed,39,ENSG00000115085
241
+ Monocyte,observed,40,ENSG00000163508
242
+ Monocyte,observed,41,ENSG00000100385
243
+ Monocyte,observed,42,ENSG00000127152
244
+ Monocyte,observed,43,ENSG00000165929
245
+ Monocyte,observed,44,ENSG00000168685
246
+ Monocyte,observed,45,ENSG00000172673
247
+ Monocyte,observed,46,ENSG00000069667
248
+ Monocyte,observed,47,ENSG00000198851
249
+ Monocyte,observed,48,ENSG00000205336
250
+ Monocyte,observed,49,ENSG00000120885
251
+ Monocyte,observed,50,ENSG00000158481
252
+ Monocyte,generated,1,ENSG00000143443
253
+ Monocyte,generated,2,ENSG00000149292
254
+ Monocyte,generated,3,ENSG00000029639
255
+ Monocyte,generated,4,ENSG00000107643
256
+ Monocyte,generated,5,ENSG00000158467
257
+ Monocyte,generated,6,ENSG00000152409
258
+ Monocyte,generated,7,ENSG00000165392
259
+ Monocyte,generated,8,ENSG00000175198
260
+ Monocyte,generated,9,ENSG00000139970
261
+ Monocyte,generated,10,ENSG00000101695
262
+ Monocyte,generated,11,ENSG00000011258
263
+ Monocyte,generated,12,ENSG00000107679
264
+ Monocyte,generated,13,ENSG00000135749
265
+ Monocyte,generated,14,ENSG00000151687
266
+ Monocyte,generated,15,ENSG00000133985
267
+ Monocyte,generated,16,ENSG00000033170
268
+ Monocyte,generated,17,ENSG00000164674
269
+ Monocyte,generated,18,ENSG00000099910
270
+ Monocyte,generated,19,ENSG00000178425
271
+ Monocyte,generated,20,ENSG00000187838
272
+ Monocyte,generated,21,ENSG00000144036
273
+ Monocyte,generated,22,ENSG00000204131
274
+ Monocyte,generated,23,ENSG00000225830
275
+ Monocyte,generated,24,ENSG00000068383
276
+ Monocyte,generated,25,ENSG00000163564
277
+ Monocyte,generated,26,ENSG00000141376
278
+ Monocyte,generated,27,ENSG00000126464
279
+ Monocyte,generated,28,ENSG00000170293
280
+ Monocyte,generated,29,ENSG00000074964
281
+ Monocyte,generated,30,ENSG00000117643
282
+ Monocyte,generated,31,ENSG00000106415
283
+ Monocyte,generated,32,ENSG00000145730
284
+ Monocyte,generated,33,ENSG00000186153
285
+ Monocyte,generated,34,ENSG00000026950
286
+ Monocyte,generated,35,ENSG00000165929
287
+ Monocyte,generated,36,ENSG00000175893
288
+ Monocyte,generated,37,ENSG00000005436
289
+ Monocyte,generated,38,ENSG00000181827
290
+ Monocyte,generated,39,ENSG00000134146
291
+ Monocyte,generated,40,ENSG00000188092
292
+ Monocyte,generated,41,ENSG00000179104
293
+ Monocyte,generated,42,ENSG00000058453
294
+ Monocyte,generated,43,ENSG00000118454
295
+ Monocyte,generated,44,ENSG00000183044
296
+ Monocyte,generated,45,ENSG00000115239
297
+ Monocyte,generated,46,ENSG00000125821
298
+ Monocyte,generated,47,ENSG00000135913
299
+ Monocyte,generated,48,ENSG00000054219
300
+ Monocyte,generated,49,ENSG00000178974
301
+ Monocyte,generated,50,ENSG00000126821
302
+ NK cell,observed,1,ENSG00000090382
303
+ NK cell,observed,2,ENSG00000085265
304
+ NK cell,observed,3,ENSG00000123358
305
+ NK cell,observed,4,ENSG00000185215
306
+ NK cell,observed,5,ENSG00000110077
307
+ NK cell,observed,6,ENSG00000038427
308
+ NK cell,observed,7,ENSG00000119535
309
+ NK cell,observed,8,ENSG00000116701
310
+ NK cell,observed,9,ENSG00000163563
311
+ NK cell,observed,10,ENSG00000109321
312
+ NK cell,observed,11,ENSG00000121552
313
+ NK cell,observed,12,ENSG00000100079
314
+ NK cell,observed,13,ENSG00000172243
315
+ NK cell,observed,14,ENSG00000169429
316
+ NK cell,observed,15,ENSG00000197629
317
+ NK cell,observed,16,ENSG00000125538
318
+ NK cell,observed,17,ENSG00000163220
319
+ NK cell,observed,18,ENSG00000144655
320
+ NK cell,observed,19,ENSG00000120708
321
+ NK cell,observed,20,ENSG00000143333
322
+ NK cell,observed,21,ENSG00000241399
323
+ NK cell,observed,22,ENSG00000197249
324
+ NK cell,observed,23,ENSG00000143546
325
+ NK cell,observed,24,ENSG00000126759
326
+ NK cell,observed,25,ENSG00000120594
327
+ NK cell,observed,26,ENSG00000101336
328
+ NK cell,observed,27,ENSG00000168497
329
+ NK cell,observed,28,ENSG00000160789
330
+ NK cell,observed,29,ENSG00000277632
331
+ NK cell,observed,30,ENSG00000131042
332
+ NK cell,observed,31,ENSG00000187164
333
+ NK cell,observed,32,ENSG00000171051
334
+ NK cell,observed,33,ENSG00000160593
335
+ NK cell,observed,34,ENSG00000232810
336
+ NK cell,observed,35,ENSG00000197766
337
+ NK cell,observed,36,ENSG00000121316
338
+ NK cell,observed,37,ENSG00000122877
339
+ NK cell,observed,38,ENSG00000275302
340
+ NK cell,observed,39,ENSG00000111275
341
+ NK cell,observed,40,ENSG00000119508
342
+ NK cell,observed,41,ENSG00000106066
343
+ NK cell,observed,42,ENSG00000162444
344
+ NK cell,observed,43,ENSG00000161835
345
+ NK cell,observed,44,ENSG00000163694
346
+ NK cell,observed,45,ENSG00000204472
347
+ NK cell,observed,46,ENSG00000163221
348
+ NK cell,observed,47,ENSG00000186407
349
+ NK cell,observed,48,ENSG00000155465
350
+ NK cell,observed,49,ENSG00000106565
351
+ NK cell,observed,50,ENSG00000156299
352
+ NK cell,generated,1,ENSG00000109184
353
+ NK cell,generated,2,ENSG00000123358
354
+ NK cell,generated,3,ENSG00000176083
355
+ NK cell,generated,4,ENSG00000151612
356
+ NK cell,generated,5,ENSG00000184677
357
+ NK cell,generated,6,ENSG00000038382
358
+ NK cell,generated,7,ENSG00000171492
359
+ NK cell,generated,8,ENSG00000121716
360
+ NK cell,generated,9,ENSG00000176148
361
+ NK cell,generated,10,ENSG00000067606
362
+ NK cell,generated,11,ENSG00000114770
363
+ NK cell,generated,12,ENSG00000123219
364
+ NK cell,generated,13,ENSG00000137802
365
+ NK cell,generated,14,ENSG00000171823
366
+ NK cell,generated,15,ENSG00000121940
367
+ NK cell,generated,16,ENSG00000184178
368
+ NK cell,generated,17,ENSG00000124160
369
+ NK cell,generated,18,ENSG00000157741
370
+ NK cell,generated,19,ENSG00000128513
371
+ NK cell,generated,20,ENSG00000147121
372
+ NK cell,generated,21,ENSG00000151348
373
+ NK cell,generated,22,ENSG00000105717
374
+ NK cell,generated,23,ENSG00000185278
375
+ NK cell,generated,24,ENSG00000004139
376
+ NK cell,generated,25,ENSG00000140718
377
+ NK cell,generated,26,ENSG00000153015
378
+ NK cell,generated,27,ENSG00000113522
379
+ NK cell,generated,28,ENSG00000134444
380
+ NK cell,generated,29,ENSG00000205476
381
+ NK cell,generated,30,ENSG00000196187
382
+ NK cell,generated,31,ENSG00000161267
383
+ NK cell,generated,32,ENSG00000197024
384
+ NK cell,generated,33,ENSG00000100027
385
+ NK cell,generated,34,ENSG00000269743
386
+ NK cell,generated,35,ENSG00000196455
387
+ NK cell,generated,36,ENSG00000106868
388
+ NK cell,generated,37,ENSG00000100105
389
+ NK cell,generated,38,ENSG00000095002
390
+ NK cell,generated,39,ENSG00000145743
391
+ NK cell,generated,40,ENSG00000107745
392
+ NK cell,generated,41,ENSG00000141376
393
+ NK cell,generated,42,ENSG00000237440
394
+ NK cell,generated,43,ENSG00000122483
395
+ NK cell,generated,44,ENSG00000278540
396
+ NK cell,generated,45,ENSG00000119321
397
+ NK cell,generated,46,ENSG00000175040
398
+ NK cell,generated,47,ENSG00000141556
399
+ NK cell,generated,48,ENSG00000161638
400
+ NK cell,generated,49,ENSG00000114166
401
+ NK cell,generated,50,ENSG00000204267
402
+ DC,observed,1,ENSG00000179639
403
+ DC,observed,2,ENSG00000168685
404
+ DC,observed,3,ENSG00000163606
405
+ DC,observed,4,ENSG00000158481
406
+ DC,observed,5,ENSG00000138449
407
+ DC,observed,6,ENSG00000100721
408
+ DC,observed,7,ENSG00000155974
409
+ DC,observed,8,ENSG00000008517
410
+ DC,observed,9,ENSG00000156313
411
+ DC,observed,10,ENSG00000132514
412
+ DC,observed,11,ENSG00000271503
413
+ DC,observed,12,ENSG00000139970
414
+ DC,observed,13,ENSG00000152315
415
+ DC,observed,14,ENSG00000081059
416
+ DC,observed,15,ENSG00000167286
417
+ DC,observed,16,ENSG00000112182
418
+ DC,observed,17,ENSG00000157657
419
+ DC,observed,18,ENSG00000113088
420
+ DC,observed,19,ENSG00000153823
421
+ DC,observed,20,ENSG00000118961
422
+ DC,observed,21,ENSG00000109099
423
+ DC,observed,22,ENSG00000186854
424
+ DC,observed,23,ENSG00000138795
425
+ DC,observed,24,ENSG00000141337
426
+ DC,observed,25,ENSG00000136111
427
+ DC,observed,26,ENSG00000160654
428
+ DC,observed,27,ENSG00000171408
429
+ DC,observed,28,ENSG00000018699
430
+ DC,observed,29,ENSG00000149131
431
+ DC,observed,30,ENSG00000172954
432
+ DC,observed,31,ENSG00000162654
433
+ DC,observed,32,ENSG00000162869
434
+ DC,observed,33,ENSG00000166432
435
+ DC,observed,34,ENSG00000179152
436
+ DC,observed,35,ENSG00000182901
437
+ DC,observed,36,ENSG00000162444
438
+ DC,observed,37,ENSG00000078070
439
+ DC,observed,38,ENSG00000087589
440
+ DC,observed,39,ENSG00000134326
441
+ DC,observed,40,ENSG00000264343
442
+ DC,observed,41,ENSG00000124459
443
+ DC,observed,42,ENSG00000058866
444
+ DC,observed,43,ENSG00000196911
445
+ DC,observed,44,ENSG00000154814
446
+ DC,observed,45,ENSG00000106952
447
+ DC,observed,46,ENSG00000151136
448
+ DC,observed,47,ENSG00000197050
449
+ DC,observed,48,ENSG00000187474
450
+ DC,observed,49,ENSG00000138002
451
+ DC,observed,50,ENSG00000110448
452
+ all (input bulk),broadcast,1,ENSG00000244734
453
+ all (input bulk),broadcast,2,ENSG00000188536
454
+ all (input bulk),broadcast,3,ENSG00000206172
455
+ all (input bulk),broadcast,4,ENSG00000115590
456
+ all (input bulk),broadcast,5,ENSG00000108950
457
+ all (input bulk),broadcast,6,ENSG00000100985
458
+ all (input bulk),broadcast,7,ENSG00000173369
459
+ all (input bulk),broadcast,8,ENSG00000179639
460
+ all (input bulk),broadcast,9,ENSG00000125740
461
+ all (input bulk),broadcast,10,ENSG00000129538
462
+ all (input bulk),broadcast,11,ENSG00000169385
463
+ all (input bulk),broadcast,12,ENSG00000123610
464
+ all (input bulk),broadcast,13,ENSG00000173372
465
+ all (input bulk),broadcast,14,ENSG00000169429
466
+ all (input bulk),broadcast,15,ENSG00000184792
467
+ all (input bulk),broadcast,16,ENSG00000132170
468
+ all (input bulk),broadcast,17,ENSG00000276085
469
+ all (input bulk),broadcast,18,ENSG00000162747
470
+ all (input bulk),broadcast,19,ENSG00000165949
471
+ all (input bulk),broadcast,20,ENSG00000177606
472
+ all (input bulk),broadcast,21,ENSG00000120885
473
+ all (input bulk),broadcast,22,ENSG00000167680
474
+ all (input bulk),broadcast,23,ENSG00000079215
475
+ all (input bulk),broadcast,24,ENSG00000144290
476
+ all (input bulk),broadcast,25,ENSG00000153234
477
+ all (input bulk),broadcast,26,ENSG00000137801
478
+ all (input bulk),broadcast,27,ENSG00000174705
479
+ all (input bulk),broadcast,28,ENSG00000100079
480
+ all (input bulk),broadcast,29,ENSG00000183019
481
+ all (input bulk),broadcast,30,ENSG00000166428
482
+ all (input bulk),broadcast,31,ENSG00000103569
483
+ all (input bulk),broadcast,32,ENSG00000117281
484
+ all (input bulk),broadcast,33,ENSG00000163221
485
+ all (input bulk),broadcast,34,ENSG00000137491
486
+ all (input bulk),broadcast,35,ENSG00000153823
487
+ all (input bulk),broadcast,36,ENSG00000101057
488
+ all (input bulk),broadcast,37,ENSG00000136826
489
+ all (input bulk),broadcast,38,ENSG00000106070
490
+ all (input bulk),broadcast,39,ENSG00000143546
491
+ all (input bulk),broadcast,40,ENSG00000277632
492
+ all (input bulk),broadcast,41,ENSG00000162772
493
+ all (input bulk),broadcast,42,ENSG00000173114
494
+ all (input bulk),broadcast,43,ENSG00000112299
495
+ all (input bulk),broadcast,44,ENSG00000169902
496
+ all (input bulk),broadcast,45,ENSG00000163736
497
+ all (input bulk),broadcast,46,ENSG00000113494
498
+ all (input bulk),broadcast,47,ENSG00000143776
499
+ all (input bulk),broadcast,48,ENSG00000176083
500
+ all (input bulk),broadcast,49,ENSG00000137198
501
+ all (input bulk),broadcast,50,ENSG00000187837