Archive 4 checkpoints (1-4)
Browse files- paper-releases/pbisc-diffusion/updates/20261001T145641Z-lora-rank-sweep-calibration-budget/diffusion/dataset/server_1/model8/plans/paired_finetune_intradataset_20260927/runs/ye2026_sepsis/fold3/lora_r64_n20/RUN.json +121 -0
- paper-releases/pbisc-diffusion/updates/20261001T145641Z-lora-rank-sweep-calibration-budget/diffusion/dataset/server_1/model8/plans/paired_finetune_intradataset_20260927/runs/ye2026_sepsis/fold3/lora_r64_n20/history.json +145 -0
- paper-releases/pbisc-diffusion/updates/20261001T145641Z-lora-rank-sweep-calibration-budget/diffusion/dataset/server_1/model8/plans/paired_finetune_intradataset_20260927/runs/ye2026_sepsis/fold3/lora_r64_n5/RUN.json +106 -0
- paper-releases/pbisc-diffusion/updates/20261001T145641Z-lora-rank-sweep-calibration-budget/diffusion/dataset/server_1/model8/plans/paired_finetune_intradataset_20260927/runs/ye2026_sepsis/fold3/lora_r64_n5/history.json +103 -0
paper-releases/pbisc-diffusion/updates/20261001T145641Z-lora-rank-sweep-calibration-budget/diffusion/dataset/server_1/model8/plans/paired_finetune_intradataset_20260927/runs/ye2026_sepsis/fold3/lora_r64_n20/RUN.json
ADDED
|
@@ -0,0 +1,121 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema": "pbisc_sdd.ft_intradataset.run.v1",
|
| 3 |
+
"source_checkpoint": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/runs/f01_6k_1x_seed20260627/checkpoint_epoch_016.pt",
|
| 4 |
+
"source_checkpoint_sha256": "8c7cd0e83e2bc19fe03dfcbc084919a1e2f61be8cc8bc12f4caf543dfda91633",
|
| 5 |
+
"dataset_dir": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/data/ye2026_sepsis",
|
| 6 |
+
"condition_npz": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/data/ye2026_sepsis/conditions_raw_fixed.npz",
|
| 7 |
+
"condition_npz_sha256": "ce8b61d7dcd3e62b9e63d52189cfb5bba881f87a661384277a7949a629231cb4",
|
| 8 |
+
"fold": 3,
|
| 9 |
+
"mode": "lora",
|
| 10 |
+
"trainable": {
|
| 11 |
+
"mode": "lora",
|
| 12 |
+
"lora_layers": [
|
| 13 |
+
"time_encoder.0",
|
| 14 |
+
"time_encoder.2",
|
| 15 |
+
"condition_encoder.0",
|
| 16 |
+
"condition_encoder.3",
|
| 17 |
+
"context_mixer.2",
|
| 18 |
+
"down_blocks.0.input_projection",
|
| 19 |
+
"down_blocks.0.context_projection.1",
|
| 20 |
+
"down_blocks.1.input_projection",
|
| 21 |
+
"down_blocks.1.context_projection.1",
|
| 22 |
+
"down_blocks.2.input_projection",
|
| 23 |
+
"down_blocks.2.context_projection.1",
|
| 24 |
+
"down_blocks.3.input_projection",
|
| 25 |
+
"down_blocks.3.context_projection.1",
|
| 26 |
+
"up_blocks.0.input_projection",
|
| 27 |
+
"up_blocks.0.context_projection.1",
|
| 28 |
+
"up_blocks.1.input_projection",
|
| 29 |
+
"up_blocks.1.context_projection.1",
|
| 30 |
+
"up_blocks.2.input_projection",
|
| 31 |
+
"up_blocks.2.context_projection.1",
|
| 32 |
+
"output_trunk.0",
|
| 33 |
+
"value_head",
|
| 34 |
+
"active_head"
|
| 35 |
+
],
|
| 36 |
+
"lora_rank": 64,
|
| 37 |
+
"lora_alpha": 64.0,
|
| 38 |
+
"n_trainable": 5184896,
|
| 39 |
+
"n_total_base": 54185184,
|
| 40 |
+
"trainable_tensors": 44
|
| 41 |
+
},
|
| 42 |
+
"lr": 0.0005,
|
| 43 |
+
"warmup": 200,
|
| 44 |
+
"batch_size": 256,
|
| 45 |
+
"ema_decay": 0.999,
|
| 46 |
+
"max_steps": 20000,
|
| 47 |
+
"steps_run": 5750,
|
| 48 |
+
"eval_every": 250,
|
| 49 |
+
"patience": 8,
|
| 50 |
+
"train_subset": {
|
| 51 |
+
"train_n": 20,
|
| 52 |
+
"subset_seed": 1003,
|
| 53 |
+
"strata_regex": "sepsis",
|
| 54 |
+
"allocation": {
|
| 55 |
+
"False": 5,
|
| 56 |
+
"True": 15
|
| 57 |
+
}
|
| 58 |
+
},
|
| 59 |
+
"train_donors_file": null,
|
| 60 |
+
"fixed_steps": null,
|
| 61 |
+
"selected_step": 3750,
|
| 62 |
+
"selected_inner_val_loss": 0.10846262564882636,
|
| 63 |
+
"pretrained_inner_val_loss": 0.11872250866144896,
|
| 64 |
+
"train_rows": [
|
| 65 |
+
"Abd-PS05",
|
| 66 |
+
"Abd-PS23",
|
| 67 |
+
"Abd-S120",
|
| 68 |
+
"Abd-S156",
|
| 69 |
+
"Abd-S47",
|
| 70 |
+
"Abd-S57",
|
| 71 |
+
"Abd-S79",
|
| 72 |
+
"Abd-S98",
|
| 73 |
+
"HC09",
|
| 74 |
+
"HC16",
|
| 75 |
+
"IC15",
|
| 76 |
+
"IC19",
|
| 77 |
+
"PHC03",
|
| 78 |
+
"Res-PS03",
|
| 79 |
+
"Res-PS12",
|
| 80 |
+
"Res-PS25",
|
| 81 |
+
"Res-S10",
|
| 82 |
+
"Res-S146",
|
| 83 |
+
"Res-S87",
|
| 84 |
+
"Skin-S43"
|
| 85 |
+
],
|
| 86 |
+
"inner_val_rows": [
|
| 87 |
+
"Abd-PS20",
|
| 88 |
+
"HC01",
|
| 89 |
+
"IC23",
|
| 90 |
+
"PHC01",
|
| 91 |
+
"Res-S127",
|
| 92 |
+
"Res-S150",
|
| 93 |
+
"Res-S40",
|
| 94 |
+
"Skin-S52"
|
| 95 |
+
],
|
| 96 |
+
"test_rows_never_loaded_for_training": [
|
| 97 |
+
"Abd-S102",
|
| 98 |
+
"Abd-S103",
|
| 99 |
+
"Abd-S51",
|
| 100 |
+
"Abd-S83",
|
| 101 |
+
"HC12",
|
| 102 |
+
"IC22",
|
| 103 |
+
"PIC01",
|
| 104 |
+
"Res-PS02",
|
| 105 |
+
"Res-PS16",
|
| 106 |
+
"Res-PS21",
|
| 107 |
+
"Res-S125",
|
| 108 |
+
"Res-S136",
|
| 109 |
+
"Res-S149",
|
| 110 |
+
"Skin-S38",
|
| 111 |
+
"Uri-S134",
|
| 112 |
+
"Uri-S20"
|
| 113 |
+
],
|
| 114 |
+
"max_abs_weight_change": 0.8789034485816956,
|
| 115 |
+
"n_tensors_changed": 22,
|
| 116 |
+
"seed": 20260927,
|
| 117 |
+
"wall_seconds": 217.9,
|
| 118 |
+
"written_utc": "2026-10-01T09:10:29.214445+00:00",
|
| 119 |
+
"checkpoint_sha256": "92633fe0e23a99984a6f3c80193a2ee4f0ad77f911f01d4812732c3e04b61554",
|
| 120 |
+
"reload_forward_max_abs_diff": 0.0
|
| 121 |
+
}
|
paper-releases/pbisc-diffusion/updates/20261001T145641Z-lora-rank-sweep-calibration-budget/diffusion/dataset/server_1/model8/plans/paired_finetune_intradataset_20260927/runs/ye2026_sepsis/fold3/lora_r64_n20/history.json
ADDED
|
@@ -0,0 +1,145 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
[
|
| 2 |
+
{
|
| 3 |
+
"step": 0,
|
| 4 |
+
"inner_val_loss": 0.11872250866144896,
|
| 5 |
+
"train_loss": null
|
| 6 |
+
},
|
| 7 |
+
{
|
| 8 |
+
"step": 250,
|
| 9 |
+
"inner_val_loss": 0.11753660021349788,
|
| 10 |
+
"train_loss": 0.114087756305933,
|
| 11 |
+
"sec": 9.6
|
| 12 |
+
},
|
| 13 |
+
{
|
| 14 |
+
"step": 500,
|
| 15 |
+
"inner_val_loss": 0.11528376583009958,
|
| 16 |
+
"train_loss": 0.11149537149071694,
|
| 17 |
+
"sec": 18.9
|
| 18 |
+
},
|
| 19 |
+
{
|
| 20 |
+
"step": 750,
|
| 21 |
+
"inner_val_loss": 0.11284831445664167,
|
| 22 |
+
"train_loss": 0.11096725636720657,
|
| 23 |
+
"sec": 28.1
|
| 24 |
+
},
|
| 25 |
+
{
|
| 26 |
+
"step": 1000,
|
| 27 |
+
"inner_val_loss": 0.11092182854190469,
|
| 28 |
+
"train_loss": 0.11084839090704918,
|
| 29 |
+
"sec": 37.2
|
| 30 |
+
},
|
| 31 |
+
{
|
| 32 |
+
"step": 1250,
|
| 33 |
+
"inner_val_loss": 0.10969548346474767,
|
| 34 |
+
"train_loss": 0.11104885971546173,
|
| 35 |
+
"sec": 46.4
|
| 36 |
+
},
|
| 37 |
+
{
|
| 38 |
+
"step": 1500,
|
| 39 |
+
"inner_val_loss": 0.10905949212610722,
|
| 40 |
+
"train_loss": 0.11073815053701401,
|
| 41 |
+
"sec": 55.6
|
| 42 |
+
},
|
| 43 |
+
{
|
| 44 |
+
"step": 1750,
|
| 45 |
+
"inner_val_loss": 0.10877735540270805,
|
| 46 |
+
"train_loss": 0.11037002918124199,
|
| 47 |
+
"sec": 64.8
|
| 48 |
+
},
|
| 49 |
+
{
|
| 50 |
+
"step": 2000,
|
| 51 |
+
"inner_val_loss": 0.10863480577245355,
|
| 52 |
+
"train_loss": 0.11045073866844177,
|
| 53 |
+
"sec": 74.1
|
| 54 |
+
},
|
| 55 |
+
{
|
| 56 |
+
"step": 2250,
|
| 57 |
+
"inner_val_loss": 0.1085681552067399,
|
| 58 |
+
"train_loss": 0.11081949988007546,
|
| 59 |
+
"sec": 83.2
|
| 60 |
+
},
|
| 61 |
+
{
|
| 62 |
+
"step": 2500,
|
| 63 |
+
"inner_val_loss": 0.1085208491422236,
|
| 64 |
+
"train_loss": 0.11045282423496246,
|
| 65 |
+
"sec": 92.4
|
| 66 |
+
},
|
| 67 |
+
{
|
| 68 |
+
"step": 2750,
|
| 69 |
+
"inner_val_loss": 0.10849630460143089,
|
| 70 |
+
"train_loss": 0.11009578469395638,
|
| 71 |
+
"sec": 101.7
|
| 72 |
+
},
|
| 73 |
+
{
|
| 74 |
+
"step": 3000,
|
| 75 |
+
"inner_val_loss": 0.10848619369789958,
|
| 76 |
+
"train_loss": 0.11054570579528808,
|
| 77 |
+
"sec": 111.0
|
| 78 |
+
},
|
| 79 |
+
{
|
| 80 |
+
"step": 3250,
|
| 81 |
+
"inner_val_loss": 0.10846429038792849,
|
| 82 |
+
"train_loss": 0.11069759047031402,
|
| 83 |
+
"sec": 120.2
|
| 84 |
+
},
|
| 85 |
+
{
|
| 86 |
+
"step": 3500,
|
| 87 |
+
"inner_val_loss": 0.10846535488963127,
|
| 88 |
+
"train_loss": 0.11008374708890915,
|
| 89 |
+
"sec": 129.7
|
| 90 |
+
},
|
| 91 |
+
{
|
| 92 |
+
"step": 3750,
|
| 93 |
+
"inner_val_loss": 0.10846262564882636,
|
| 94 |
+
"train_loss": 0.11022686484456062,
|
| 95 |
+
"sec": 139.0
|
| 96 |
+
},
|
| 97 |
+
{
|
| 98 |
+
"step": 4000,
|
| 99 |
+
"inner_val_loss": 0.10847668210044503,
|
| 100 |
+
"train_loss": 0.11031151148676872,
|
| 101 |
+
"sec": 148.2
|
| 102 |
+
},
|
| 103 |
+
{
|
| 104 |
+
"step": 4250,
|
| 105 |
+
"inner_val_loss": 0.10848874831572175,
|
| 106 |
+
"train_loss": 0.11041897344589234,
|
| 107 |
+
"sec": 157.4
|
| 108 |
+
},
|
| 109 |
+
{
|
| 110 |
+
"step": 4500,
|
| 111 |
+
"inner_val_loss": 0.10850028833374381,
|
| 112 |
+
"train_loss": 0.11032432317733765,
|
| 113 |
+
"sec": 166.6
|
| 114 |
+
},
|
| 115 |
+
{
|
| 116 |
+
"step": 4750,
|
| 117 |
+
"inner_val_loss": 0.10850834054872394,
|
| 118 |
+
"train_loss": 0.11008772730827332,
|
| 119 |
+
"sec": 175.7
|
| 120 |
+
},
|
| 121 |
+
{
|
| 122 |
+
"step": 5000,
|
| 123 |
+
"inner_val_loss": 0.10851432336494327,
|
| 124 |
+
"train_loss": 0.11028475132584571,
|
| 125 |
+
"sec": 184.9
|
| 126 |
+
},
|
| 127 |
+
{
|
| 128 |
+
"step": 5250,
|
| 129 |
+
"inner_val_loss": 0.10851876065135002,
|
| 130 |
+
"train_loss": 0.10985885608196258,
|
| 131 |
+
"sec": 194.6
|
| 132 |
+
},
|
| 133 |
+
{
|
| 134 |
+
"step": 5500,
|
| 135 |
+
"inner_val_loss": 0.10852761007845402,
|
| 136 |
+
"train_loss": 0.11030721035599708,
|
| 137 |
+
"sec": 205.5
|
| 138 |
+
},
|
| 139 |
+
{
|
| 140 |
+
"step": 5750,
|
| 141 |
+
"inner_val_loss": 0.10853655822575092,
|
| 142 |
+
"train_loss": 0.11000900575518609,
|
| 143 |
+
"sec": 216.5
|
| 144 |
+
}
|
| 145 |
+
]
|
paper-releases/pbisc-diffusion/updates/20261001T145641Z-lora-rank-sweep-calibration-budget/diffusion/dataset/server_1/model8/plans/paired_finetune_intradataset_20260927/runs/ye2026_sepsis/fold3/lora_r64_n5/RUN.json
ADDED
|
@@ -0,0 +1,106 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema": "pbisc_sdd.ft_intradataset.run.v1",
|
| 3 |
+
"source_checkpoint": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/runs/f01_6k_1x_seed20260627/checkpoint_epoch_016.pt",
|
| 4 |
+
"source_checkpoint_sha256": "8c7cd0e83e2bc19fe03dfcbc084919a1e2f61be8cc8bc12f4caf543dfda91633",
|
| 5 |
+
"dataset_dir": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/data/ye2026_sepsis",
|
| 6 |
+
"condition_npz": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/data/ye2026_sepsis/conditions_raw_fixed.npz",
|
| 7 |
+
"condition_npz_sha256": "ce8b61d7dcd3e62b9e63d52189cfb5bba881f87a661384277a7949a629231cb4",
|
| 8 |
+
"fold": 3,
|
| 9 |
+
"mode": "lora",
|
| 10 |
+
"trainable": {
|
| 11 |
+
"mode": "lora",
|
| 12 |
+
"lora_layers": [
|
| 13 |
+
"time_encoder.0",
|
| 14 |
+
"time_encoder.2",
|
| 15 |
+
"condition_encoder.0",
|
| 16 |
+
"condition_encoder.3",
|
| 17 |
+
"context_mixer.2",
|
| 18 |
+
"down_blocks.0.input_projection",
|
| 19 |
+
"down_blocks.0.context_projection.1",
|
| 20 |
+
"down_blocks.1.input_projection",
|
| 21 |
+
"down_blocks.1.context_projection.1",
|
| 22 |
+
"down_blocks.2.input_projection",
|
| 23 |
+
"down_blocks.2.context_projection.1",
|
| 24 |
+
"down_blocks.3.input_projection",
|
| 25 |
+
"down_blocks.3.context_projection.1",
|
| 26 |
+
"up_blocks.0.input_projection",
|
| 27 |
+
"up_blocks.0.context_projection.1",
|
| 28 |
+
"up_blocks.1.input_projection",
|
| 29 |
+
"up_blocks.1.context_projection.1",
|
| 30 |
+
"up_blocks.2.input_projection",
|
| 31 |
+
"up_blocks.2.context_projection.1",
|
| 32 |
+
"output_trunk.0",
|
| 33 |
+
"value_head",
|
| 34 |
+
"active_head"
|
| 35 |
+
],
|
| 36 |
+
"lora_rank": 64,
|
| 37 |
+
"lora_alpha": 64.0,
|
| 38 |
+
"n_trainable": 5184896,
|
| 39 |
+
"n_total_base": 54185184,
|
| 40 |
+
"trainable_tensors": 44
|
| 41 |
+
},
|
| 42 |
+
"lr": 0.0005,
|
| 43 |
+
"warmup": 200,
|
| 44 |
+
"batch_size": 256,
|
| 45 |
+
"ema_decay": 0.999,
|
| 46 |
+
"max_steps": 20000,
|
| 47 |
+
"steps_run": 4000,
|
| 48 |
+
"eval_every": 250,
|
| 49 |
+
"patience": 8,
|
| 50 |
+
"train_subset": {
|
| 51 |
+
"train_n": 5,
|
| 52 |
+
"subset_seed": 1003,
|
| 53 |
+
"strata_regex": "sepsis",
|
| 54 |
+
"allocation": {
|
| 55 |
+
"False": 1,
|
| 56 |
+
"True": 4
|
| 57 |
+
}
|
| 58 |
+
},
|
| 59 |
+
"train_donors_file": null,
|
| 60 |
+
"fixed_steps": null,
|
| 61 |
+
"selected_step": 2000,
|
| 62 |
+
"selected_inner_val_loss": 0.10955000901594758,
|
| 63 |
+
"pretrained_inner_val_loss": 0.11872250866144896,
|
| 64 |
+
"train_rows": [
|
| 65 |
+
"Abd-S47",
|
| 66 |
+
"Abd-S57",
|
| 67 |
+
"HC09",
|
| 68 |
+
"Res-PS03",
|
| 69 |
+
"Res-PS12"
|
| 70 |
+
],
|
| 71 |
+
"inner_val_rows": [
|
| 72 |
+
"Abd-PS20",
|
| 73 |
+
"HC01",
|
| 74 |
+
"IC23",
|
| 75 |
+
"PHC01",
|
| 76 |
+
"Res-S127",
|
| 77 |
+
"Res-S150",
|
| 78 |
+
"Res-S40",
|
| 79 |
+
"Skin-S52"
|
| 80 |
+
],
|
| 81 |
+
"test_rows_never_loaded_for_training": [
|
| 82 |
+
"Abd-S102",
|
| 83 |
+
"Abd-S103",
|
| 84 |
+
"Abd-S51",
|
| 85 |
+
"Abd-S83",
|
| 86 |
+
"HC12",
|
| 87 |
+
"IC22",
|
| 88 |
+
"PIC01",
|
| 89 |
+
"Res-PS02",
|
| 90 |
+
"Res-PS16",
|
| 91 |
+
"Res-PS21",
|
| 92 |
+
"Res-S125",
|
| 93 |
+
"Res-S136",
|
| 94 |
+
"Res-S149",
|
| 95 |
+
"Skin-S38",
|
| 96 |
+
"Uri-S134",
|
| 97 |
+
"Uri-S20"
|
| 98 |
+
],
|
| 99 |
+
"max_abs_weight_change": 0.29953959584236145,
|
| 100 |
+
"n_tensors_changed": 22,
|
| 101 |
+
"seed": 20260927,
|
| 102 |
+
"wall_seconds": 148.6,
|
| 103 |
+
"written_utc": "2026-10-01T08:23:08.935546+00:00",
|
| 104 |
+
"checkpoint_sha256": "22be6e4369f9d6e4f929fbd71cbff817fddd8a233564619d7079cd5aa36dca9e",
|
| 105 |
+
"reload_forward_max_abs_diff": 0.0
|
| 106 |
+
}
|
paper-releases/pbisc-diffusion/updates/20261001T145641Z-lora-rank-sweep-calibration-budget/diffusion/dataset/server_1/model8/plans/paired_finetune_intradataset_20260927/runs/ye2026_sepsis/fold3/lora_r64_n5/history.json
ADDED
|
@@ -0,0 +1,103 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
[
|
| 2 |
+
{
|
| 3 |
+
"step": 0,
|
| 4 |
+
"inner_val_loss": 0.11872250866144896,
|
| 5 |
+
"train_loss": null
|
| 6 |
+
},
|
| 7 |
+
{
|
| 8 |
+
"step": 250,
|
| 9 |
+
"inner_val_loss": 0.11756244208663702,
|
| 10 |
+
"train_loss": 0.1126802730858326,
|
| 11 |
+
"sec": 9.5
|
| 12 |
+
},
|
| 13 |
+
{
|
| 14 |
+
"step": 500,
|
| 15 |
+
"inner_val_loss": 0.11540225660428405,
|
| 16 |
+
"train_loss": 0.1096274680197239,
|
| 17 |
+
"sec": 18.8
|
| 18 |
+
},
|
| 19 |
+
{
|
| 20 |
+
"step": 750,
|
| 21 |
+
"inner_val_loss": 0.11304610362276435,
|
| 22 |
+
"train_loss": 0.10888966548442841,
|
| 23 |
+
"sec": 28.0
|
| 24 |
+
},
|
| 25 |
+
{
|
| 26 |
+
"step": 1000,
|
| 27 |
+
"inner_val_loss": 0.11122345412150025,
|
| 28 |
+
"train_loss": 0.10873925772309304,
|
| 29 |
+
"sec": 37.1
|
| 30 |
+
},
|
| 31 |
+
{
|
| 32 |
+
"step": 1250,
|
| 33 |
+
"inner_val_loss": 0.11014121398329735,
|
| 34 |
+
"train_loss": 0.10919241890311242,
|
| 35 |
+
"sec": 46.2
|
| 36 |
+
},
|
| 37 |
+
{
|
| 38 |
+
"step": 1500,
|
| 39 |
+
"inner_val_loss": 0.10968659492209554,
|
| 40 |
+
"train_loss": 0.10899908009171486,
|
| 41 |
+
"sec": 55.4
|
| 42 |
+
},
|
| 43 |
+
{
|
| 44 |
+
"step": 1750,
|
| 45 |
+
"inner_val_loss": 0.10955275734886527,
|
| 46 |
+
"train_loss": 0.10867675888538361,
|
| 47 |
+
"sec": 64.6
|
| 48 |
+
},
|
| 49 |
+
{
|
| 50 |
+
"step": 2000,
|
| 51 |
+
"inner_val_loss": 0.10955000901594758,
|
| 52 |
+
"train_loss": 0.10871653217077255,
|
| 53 |
+
"sec": 73.9
|
| 54 |
+
},
|
| 55 |
+
{
|
| 56 |
+
"step": 2250,
|
| 57 |
+
"inner_val_loss": 0.10959768248721957,
|
| 58 |
+
"train_loss": 0.10878002214431763,
|
| 59 |
+
"sec": 83.0
|
| 60 |
+
},
|
| 61 |
+
{
|
| 62 |
+
"step": 2500,
|
| 63 |
+
"inner_val_loss": 0.10965547570958734,
|
| 64 |
+
"train_loss": 0.1087325599193573,
|
| 65 |
+
"sec": 92.2
|
| 66 |
+
},
|
| 67 |
+
{
|
| 68 |
+
"step": 2750,
|
| 69 |
+
"inner_val_loss": 0.10972438007593155,
|
| 70 |
+
"train_loss": 0.10843583315610886,
|
| 71 |
+
"sec": 101.4
|
| 72 |
+
},
|
| 73 |
+
{
|
| 74 |
+
"step": 3000,
|
| 75 |
+
"inner_val_loss": 0.10978334955871105,
|
| 76 |
+
"train_loss": 0.10855799293518066,
|
| 77 |
+
"sec": 110.4
|
| 78 |
+
},
|
| 79 |
+
{
|
| 80 |
+
"step": 3250,
|
| 81 |
+
"inner_val_loss": 0.10986294317990541,
|
| 82 |
+
"train_loss": 0.10840335050225258,
|
| 83 |
+
"sec": 119.5
|
| 84 |
+
},
|
| 85 |
+
{
|
| 86 |
+
"step": 3500,
|
| 87 |
+
"inner_val_loss": 0.10993121098726988,
|
| 88 |
+
"train_loss": 0.10796533492207527,
|
| 89 |
+
"sec": 128.8
|
| 90 |
+
},
|
| 91 |
+
{
|
| 92 |
+
"step": 3750,
|
| 93 |
+
"inner_val_loss": 0.10997290210798383,
|
| 94 |
+
"train_loss": 0.10873817372322082,
|
| 95 |
+
"sec": 138.1
|
| 96 |
+
},
|
| 97 |
+
{
|
| 98 |
+
"step": 4000,
|
| 99 |
+
"inner_val_loss": 0.1100140349008143,
|
| 100 |
+
"train_loss": 0.10845954501628875,
|
| 101 |
+
"sec": 147.3
|
| 102 |
+
}
|
| 103 |
+
]
|