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lmjohns3/theanets
theanets/layers/base.py
https://github.com/lmjohns3/theanets/blob/79db9f878ef2071f2f576a1cf5d43a752a55894a/theanets/layers/base.py#L370-L394
def find(self, key): '''Get a shared variable for a parameter by name. Parameters ---------- key : str or int The name of the parameter to look up, or the index of the parameter in our parameter list. These are both dependent on the implementation of ...
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Get a shared variable for a parameter by name. Parameters ---------- key : str or int The name of the parameter to look up, or the index of the parameter in our parameter list. These are both dependent on the implementation of the layer. Returns ...
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python
test
29.56
vmonaco/pohmm
pohmm/pohmm.py
https://github.com/vmonaco/pohmm/blob/c00f8a62d3005a171d424549a55d46c421859ae9/pohmm/pohmm.py#L989-L1049
def expected_value(self, feature=None, pstate=None, hstate=None, pstate_prob=None, hstate_prob=None): """ Determine the joint maximum likelihood estimate """ # Use the first feature by default if feature is None: feature = self.emission_name[0] # Will default...
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Determine the joint maximum likelihood estimate
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python
train
55.409836
manns/pyspread
pyspread/src/interfaces/pys.py
https://github.com/manns/pyspread/blob/0e2fd44c2e0f06605efc3058c20a43a8c1f9e7e0/pyspread/src/interfaces/pys.py#L280-L295
def _pys2col_widths(self, line): """Updates col_widths in code_array""" # Split with maxsplit 3 split_line = self._split_tidy(line) key = col, tab = self._get_key(*split_line[:2]) width = float(split_line[2]) shape = self.code_array.shape try: if co...
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Updates col_widths in code_array
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python
train
27.375
chrisrink10/basilisp
src/basilisp/lang/compiler/generator.py
https://github.com/chrisrink10/basilisp/blob/3d82670ee218ec64eb066289c82766d14d18cc92/src/basilisp/lang/compiler/generator.py#L812-L832
def _do_to_py_ast(ctx: GeneratorContext, node: Do) -> GeneratedPyAST: """Return a Python AST Node for a `do` expression.""" assert node.op == NodeOp.DO assert not node.is_body body_ast = GeneratedPyAST.reduce( *map(partial(gen_py_ast, ctx), chain(node.statements, [node.ret])) ) fn_body...
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Return a Python AST Node for a `do` expression.
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python
test
33.095238
phoebe-project/phoebe2
phoebe/parameters/parameters.py
https://github.com/phoebe-project/phoebe2/blob/e64b8be683977064e2d55dd1b3ac400f64c3e379/phoebe/parameters/parameters.py#L1283-L1314
def filter(self, twig=None, check_visible=True, check_default=True, **kwargs): """ Filter the ParameterSet based on the meta-tags of the Parameters and return another ParameterSet. Because another ParameterSet is returned, these filter calls are chainable. >>> b.filter(...
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Filter the ParameterSet based on the meta-tags of the Parameters and return another ParameterSet. Because another ParameterSet is returned, these filter calls are chainable. >>> b.filter(context='component').filter(component='starA') :parameter str twig: (optional) the search ...
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python
train
51.65625
tensorflow/probability
tensorflow_probability/python/stats/quantiles.py
https://github.com/tensorflow/probability/blob/e87fe34111d68c35db0f9eeb4935f1ece9e1a8f5/tensorflow_probability/python/stats/quantiles.py#L292-L400
def histogram(x, edges, axis=None, extend_lower_interval=False, extend_upper_interval=False, dtype=None, name=None): """Count how often `x` falls in intervals defined by `edges`. Given `edges = [c0, ..., cK]`, defining intervals ...
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Count how often `x` falls in intervals defined by `edges`. Given `edges = [c0, ..., cK]`, defining intervals `I0 = [c0, c1)`, `I1 = [c1, c2)`, ..., `I_{K-1} = [c_{K-1}, cK]`, This function counts how often `x` falls into each interval. Values of `x` outside of the intervals cause errors. Consider using `ex...
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python
test
40.477064
yyuu/botornado
boto/s3/bucket.py
https://github.com/yyuu/botornado/blob/fffb056f5ff2324d1d5c1304014cfb1d899f602e/boto/s3/bucket.py#L360-L397
def get_all_versions(self, headers=None, **params): """ A lower-level, version-aware method for listing contents of a bucket. This closely models the actual S3 API and requires you to manually handle the paging of results. For a higher-level method that handles the details of pa...
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A lower-level, version-aware method for listing contents of a bucket. This closely models the actual S3 API and requires you to manually handle the paging of results. For a higher-level method that handles the details of paging for you, you can use the list method. :type max_ke...
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python
train
47.026316
has2k1/plotnine
plotnine/aes.py
https://github.com/has2k1/plotnine/blob/566e579af705367e584fb27a74e6c5199624ca89/plotnine/aes.py#L294-L311
def strip_dots(value): """ Remove dots(if any) that mark calculated aesthetics Parameters ---------- value : object Aesthetic value. In most cases this will be a string but other types will pass through unmodified. Return ------ out : object Aesthetic value with...
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Remove dots(if any) that mark calculated aesthetics Parameters ---------- value : object Aesthetic value. In most cases this will be a string but other types will pass through unmodified. Return ------ out : object Aesthetic value with the dots removed.
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python
train
23.222222
gwastro/pycbc
pycbc/inference/sampler/base_mcmc.py
https://github.com/gwastro/pycbc/blob/7a64cdd104d263f1b6ea0b01e6841837d05a4cb3/pycbc/inference/sampler/base_mcmc.py#L385-L427
def set_p0(self, samples_file=None, prior=None): """Sets the initial position of the walkers. Parameters ---------- samples_file : InferenceFile, optional If provided, use the last iteration in the given file for the starting positions. prior : JointDistr...
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Sets the initial position of the walkers. Parameters ---------- samples_file : InferenceFile, optional If provided, use the last iteration in the given file for the starting positions. prior : JointDistribution, optional Use the given prior to set the...
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python
train
44.55814
manns/pyspread
pyspread/src/gui/_widgets.py
https://github.com/manns/pyspread/blob/0e2fd44c2e0f06605efc3058c20a43a8c1f9e7e0/pyspread/src/gui/_widgets.py#L686-L702
def toggle(self, event): """Toggles state to next bitmap""" if self.state < len(self.bitmap_list) - 1: self.state += 1 else: self.state = 0 self.SetBitmapLabel(self.bitmap_list[self.state]) try: event.Skip() except AttributeError: ...
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Toggles state to next bitmap
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python
train
25.352941
gabfl/password-generator-py
src/pwgenerator.py
https://github.com/gabfl/password-generator-py/blob/cd59078fd3e6ea85b7acd9bfcf6d04014c0f7220/src/pwgenerator.py#L99-L124
def main(): """ Main method """ # Options global args parser = argparse.ArgumentParser() parser.add_argument("-n", "--min_word_length", type=int, help="Minimum length for each word", default=3) parser.add_argument("-x", "--max_word_length", type=int, ...
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Main method
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python
train
43.461538
adewes/blitzdb
blitzdb/backends/file/backend.py
https://github.com/adewes/blitzdb/blob/4b459e0bcde9e1f6224dd4e3bea74194586864b0/blitzdb/backends/file/backend.py#L567-L589
def _canonicalize_query(self, query): """ Transform the query dictionary to replace e.g. documents with __ref__ fields. """ def transform_query(q): if isinstance(q, dict): nq = {} for key,value in q.items(): nq[key] = tra...
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Transform the query dictionary to replace e.g. documents with __ref__ fields.
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python
train
31
chaoss/grimoirelab-perceval
perceval/backends/core/gitlab.py
https://github.com/chaoss/grimoirelab-perceval/blob/41c908605e88b7ebc3a536c643fa0f212eaf9e0e/perceval/backends/core/gitlab.py#L554-L585
def fetch_items(self, path, payload): """Return the items from GitLab API using links pagination""" page = 0 # current page last_page = None # last page url_next = urijoin(self.base_url, GitLabClient.PROJECTS, self.owner + '%2F' + self.repository, path) logger.debug("Get GitL...
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Return the items from GitLab API using links pagination
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python
test
33.625
NatLibFi/Skosify
skosify/infer.py
https://github.com/NatLibFi/Skosify/blob/1d269987f10df08e706272dcf6a86aef4abebcde/skosify/infer.py#L115-L133
def rdfs_properties(rdf): """Perform RDFS subproperty inference. Add superproperties where subproperties have been used.""" # find out the subproperty mappings superprops = {} # key: property val: set([superprop1, superprop2..]) for s, o in rdf.subject_objects(RDFS.subPropertyOf): superpr...
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Perform RDFS subproperty inference. Add superproperties where subproperties have been used.
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python
train
37.526316
ricequant/rqalpha
rqalpha/mod/rqalpha_mod_sys_accounts/api/api_stock.py
https://github.com/ricequant/rqalpha/blob/ac40a62d4e7eca9494b4d0a14f46facf5616820c/rqalpha/mod/rqalpha_mod_sys_accounts/api/api_stock.py#L457-L469
def is_suspended(order_book_id, count=1): """ 判断某只股票是否全天停牌。 :param str order_book_id: 某只股票的代码或股票代码,可传入单只股票的order_book_id, symbol :param int count: 回溯获取的数据个数。默认为当前能够获取到的最近的数据 :return: count为1时 `bool`; count>1时 `pandas.DataFrame` """ dt = Environment.get_instance().calendar_dt.date() or...
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判断某只股票是否全天停牌。 :param str order_book_id: 某只股票的代码或股票代码,可传入单只股票的order_book_id, symbol :param int count: 回溯获取的数据个数。默认为当前能够获取到的最近的数据 :return: count为1时 `bool`; count>1时 `pandas.DataFrame`
[ "判断某只股票是否全天停牌。" ]
python
train
34.692308
quantumlib/Cirq
cirq/circuits/text_diagram_drawer.py
https://github.com/quantumlib/Cirq/blob/0827da80dd7880e5b923eb69407e980ed9bc0bd2/cirq/circuits/text_diagram_drawer.py#L124-L132
def vertical_line(self, x: Union[int, float], y1: Union[int, float], y2: Union[int, float], emphasize: bool = False ) -> None: """Adds a line from (x, y1) to (x, y2).""" y1, y2 = sorted([y1, y2]...
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Adds a line from (x, y1) to (x, y2).
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python
train
42.777778
numenta/nupic
examples/network/custom_region_demo.py
https://github.com/numenta/nupic/blob/5922fafffdccc8812e72b3324965ad2f7d4bbdad/examples/network/custom_region_demo.py#L106-L120
def runNetwork(network, writer): """Run the network and write output to writer. :param network: a Network instance to run :param writer: a csv.writer instance to write output to """ identityRegion = network.regions["identityRegion"] for i in xrange(_NUM_RECORDS): # Run the network for a single iterati...
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Run the network and write output to writer. :param network: a Network instance to run :param writer: a csv.writer instance to write output to
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python
valid
30.733333
probcomp/crosscat
src/LocalEngine.py
https://github.com/probcomp/crosscat/blob/4a05bddb06a45f3b7b3e05e095720f16257d1535/src/LocalEngine.py#L177-L284
def analyze(self, M_c, T, X_L, X_D, seed, kernel_list=(), n_steps=1, c=(), r=(), max_iterations=-1, max_time=-1, do_diagnostics=False, diagnostics_every_N=1, ROW_CRP_ALPHA_GRID=(), COLUMN_CRP_ALPHA_GRID=(), S_GRID=(), MU_GRI...
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Evolve the latent state by running MCMC transition kernels. :param seed: The random seed :type seed: int :param M_c: The column metadata :type M_c: dict :param T: The data table in mapped representation (all floats, generated by data_utils.read_data_objects) ...
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python
train
38.203704
peri-source/peri
peri/util.py
https://github.com/peri-source/peri/blob/61beed5deaaf978ab31ed716e8470d86ba639867/peri/util.py#L665-L670
def filtered_image(self, im): """Returns a filtered image after applying the Fourier-space filters""" q = np.fft.fftn(im) for k,v in self.filters: q[k] -= v return np.real(np.fft.ifftn(q))
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Returns a filtered image after applying the Fourier-space filters
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python
valid
37.833333
tcalmant/ipopo
pelix/shell/core.py
https://github.com/tcalmant/ipopo/blob/2f9ae0c44cd9c34ef1a9d50837b3254e75678eb1/pelix/shell/core.py#L813-L819
def install(self, io_handler, module_name): """ Installs the bundle with the given module name """ bundle = self._context.install_bundle(module_name) io_handler.write_line("Bundle ID: {0}", bundle.get_bundle_id()) return bundle.get_bundle_id()
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Installs the bundle with the given module name
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python
train
40.714286
chrisspen/burlap
burlap/debug.py
https://github.com/chrisspen/burlap/blob/a92b0a8e5206850bb777c74af8421ea8b33779bd/burlap/debug.py#L262-L269
def tunnel(self, local_port, remote_port): """ Creates an SSH tunnel. """ r = self.local_renderer r.env.tunnel_local_port = local_port r.env.tunnel_remote_port = remote_port r.local(' ssh -i {key_filename} -L {tunnel_local_port}:localhost:{tunnel_remote_port} {use...
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Creates an SSH tunnel.
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python
valid
41.75
corydodt/Crosscap
crosscap/urltool.py
https://github.com/corydodt/Crosscap/blob/388a2ec36b8aa85e8f1ed692bb6e43474ba76c8e/crosscap/urltool.py#L159-L188
def dumpRule(serviceCls, rule, prefix): """ Create an in-between representation of the rule, so we can eventually convert it to OpenAPIPathItem with OpenAPIOperation(s) """ rulePath = prefix + rule.rule rulePath = re.sub('/{2,}', '/', rulePath) cor = ConvertedRule( rulePath=rulePath...
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Create an in-between representation of the rule, so we can eventually convert it to OpenAPIPathItem with OpenAPIOperation(s)
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python
train
32.566667
totalgood/pugnlp
src/pugnlp/util.py
https://github.com/totalgood/pugnlp/blob/c43445b14afddfdeadc5f3076675c9e8fc1ee67c/src/pugnlp/util.py#L606-L628
def list_set(seq): """Similar to `list(set(seq))`, but maintains the order of `seq` while eliminating duplicates In general list(set(L)) will not have the same order as the original list. This is a list(set(L)) function that will preserve the order of L. Arguments: seq (iterable): list, tuple, o...
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Similar to `list(set(seq))`, but maintains the order of `seq` while eliminating duplicates In general list(set(L)) will not have the same order as the original list. This is a list(set(L)) function that will preserve the order of L. Arguments: seq (iterable): list, tuple, or other iterable to be use...
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python
train
36.695652
ontio/ontology-python-sdk
ontology/network/rpc.py
https://github.com/ontio/ontology-python-sdk/blob/ac88bdda941896c5d2ced08422a9c5179d3f9b19/ontology/network/rpc.py#L447-L459
def send_raw_transaction(self, tx: Transaction, is_full: bool = False) -> str: """ This interface is used to send the transaction into the network. :param tx: Transaction object in ontology Python SDK. :param is_full: :return: a hexadecimal transaction hash value. """ ...
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This interface is used to send the transaction into the network. :param tx: Transaction object in ontology Python SDK. :param is_full: :return: a hexadecimal transaction hash value.
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python
train
43.846154
vertexproject/synapse
synapse/lib/provenance.py
https://github.com/vertexproject/synapse/blob/22e67c5a8f6d7caddbcf34b39ab1bd2d6c4a6e0b/synapse/lib/provenance.py#L144-L152
def provStacks(self, offs, size): ''' Returns a stream of provenance stacks at the given offset ''' for _, iden in self.provseq.slice(offs, size): stack = self.getProvStack(iden) if stack is None: continue yield (iden, stack)
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Returns a stream of provenance stacks at the given offset
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python
train
33.444444
ChrisCummins/labm8
fs.py
https://github.com/ChrisCummins/labm8/blob/dd10d67a757aefb180cb508f86696f99440c94f5/fs.py#L304-L330
def rm(*components, **kwargs): """ Remove a file or directory. If path is a directory, this recursively removes the directory and any contents. Non-existent paths are silently ignored. Supports Unix style globbing by default (disable using glob=False). For details on globbing pattern expansion...
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Remove a file or directory. If path is a directory, this recursively removes the directory and any contents. Non-existent paths are silently ignored. Supports Unix style globbing by default (disable using glob=False). For details on globbing pattern expansion, see: https://docs.python.org/2/l...
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python
train
32.962963
AustralianSynchrotron/lightflow
lightflow/workers.py
https://github.com/AustralianSynchrotron/lightflow/blob/dc53dbc1d961e20fb144273baca258060705c03e/lightflow/workers.py#L10-L42
def start_worker(queues, config, *, name=None, celery_args=None, check_datastore=True): """ Start a worker process. Args: queues (list): List of queue names this worker accepts jobs from. config (Config): Reference to the configuration object from which the settings for the worker a...
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Start a worker process. Args: queues (list): List of queue names this worker accepts jobs from. config (Config): Reference to the configuration object from which the settings for the worker are retrieved. name (string): Unique name for the worker. The hostname template variables...
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python
train
41.484848
synw/goerr
goerr/__init__.py
https://github.com/synw/goerr/blob/08b3809d6715bffe26899a769d96fa5de8573faf/goerr/__init__.py#L225-L263
def _errmsg(self, error: "Err", tb: bool=False, i: int=None, msgformat: str="terminal") -> str: """ Get the error message """ if msgformat == "terminal": msg = self._headline(error, i) if error.ex is not None: msg += "\n" + "line " ...
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Get the error message
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python
train
41.358974
Xython/Linq.py
linq/standard/dict.py
https://github.com/Xython/Linq.py/blob/ffb65f92f1df0d8161d5f835f5947554f6f33d72/linq/standard/dict.py#L143-L159
def TakeWhile(self: dict, f): """ [ { 'self': [1, 2, 3, 4, 5], 'f': lambda x: x < 4, 'assert': lambda ret: list(ret) == [1, 2, 3] } ] """ if is_to_destruct(f): f = destruct_func(f) for e in self.items(): if not f(e): ...
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[ { 'self': [1, 2, 3, 4, 5], 'f': lambda x: x < 4, 'assert': lambda ret: list(ret) == [1, 2, 3] } ]
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python
train
19.352941
thecynic/pylutron
pylutron/__init__.py
https://github.com/thecynic/pylutron/blob/4d9222c96ef7ac7ac458031c058ad93ec31cebbf/pylutron/__init__.py#L63-L72
def connect(self): """Connects to the lutron controller.""" if self._connected or self.is_alive(): raise ConnectionExistsError("Already connected") # After starting the thread we wait for it to post us # an event signifying that connection is established. This # ensures that the caller only re...
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Connects to the lutron controller.
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python
train
44.2
bapakode/OmMongo
ommongo/fields/document_field.py
https://github.com/bapakode/OmMongo/blob/52b5a5420516dc709f2d2eb065818c7973991ce3/ommongo/fields/document_field.py#L96-L100
def wrap(self, value): ''' Validate ``value`` and then use the document's class to wrap the value''' self.validate_wrap(value) return self.type.wrap(value)
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Validate ``value`` and then use the document's class to wrap the value
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python
train
37.4
google/grr
grr/client/grr_response_client/client_actions/file_finder.py
https://github.com/google/grr/blob/5cef4e8e2f0d5df43ea4877e9c798e0bf60bfe74/grr/client/grr_response_client/client_actions/file_finder.py#L28-L55
def FileFinderOSFromClient(args): """This function expands paths from the args and returns related stat entries. Args: args: An `rdf_file_finder.FileFinderArgs` object. Yields: `rdf_paths.PathSpec` instances. """ stat_cache = filesystem.StatCache() opts = args.action.stat for path in GetExpand...
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This function expands paths from the args and returns related stat entries. Args: args: An `rdf_file_finder.FileFinderArgs` object. Yields: `rdf_paths.PathSpec` instances.
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python
train
32.678571
pyQode/pyqode.core
pyqode/core/widgets/output_window.py
https://github.com/pyQode/pyqode.core/blob/a99ec6cd22d519394f613309412f8329dc4e90cb/pyqode/core/widgets/output_window.py#L1141-L1159
def _append_message(self, text, char_format): """ Parses text and executes parsed operations. """ self._cursor = self._text_edit.textCursor() operations = self._parser.parse_text(FormattedText(text, char_format)) for i, operation in enumerate(operations): try:...
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Parses text and executes parsed operations.
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python
train
43.368421
KxSystems/pyq
src/pyq/_n.py
https://github.com/KxSystems/pyq/blob/ad7b807abde94615a7344aaa930bb01fb1552cc5/src/pyq/_n.py#L148-L166
def array(self, dtype=None): """An implementation of __array__()""" t = self._t # timestamp (12) through last enum (76) if 11 <= t < 77: dtype = dtypeof(self) a = numpy.empty(len(self), dtype) k2a(a, self) return a # table (98) if t == 98: if dtype is None...
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An implementation of __array__()
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python
train
30.894737
ekzhu/datasketch
datasketch/hyperloglog.py
https://github.com/ekzhu/datasketch/blob/b3e4129987890a2beb04f2c0b6dc618ae35f2e14/datasketch/hyperloglog.py#L184-L188
def clear(self): ''' Reset the current HyperLogLog to empty. ''' self.reg = np.zeros((self.m,), dtype=np.int8)
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Reset the current HyperLogLog to empty.
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python
test
27.6
Robpol86/libnl
libnl/nl80211/iw_util.py
https://github.com/Robpol86/libnl/blob/274e9fdaa39822d06ef70b799ed4a95937a4d923/libnl/nl80211/iw_util.py#L131-L159
def get_ht_mcs(mcs): """http://git.kernel.org/cgit/linux/kernel/git/jberg/iw.git/tree/util.c?id=v3.17#n591. Positional arguments: mcs -- bytearray. Returns: Dict. """ answers = dict() max_rx_supp_data_rate = (mcs[10] & ((mcs[11] & 0x3) << 8)) tx_mcs_set_defined = not not (mcs[12] &...
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http://git.kernel.org/cgit/linux/kernel/git/jberg/iw.git/tree/util.c?id=v3.17#n591. Positional arguments: mcs -- bytearray. Returns: Dict.
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python
train
36.241379
dagster-io/dagster
python_modules/dagster/dagster/core/execution.py
https://github.com/dagster-io/dagster/blob/4119f8c773089de64831b1dfb9e168e353d401dc/python_modules/dagster/dagster/core/execution.py#L241-L273
def transformed_value(self, output_name=DEFAULT_OUTPUT): '''Returns transformed value either for DEFAULT_OUTPUT or for the output given as output_name. Returns None if execution result isn't a success. Reconstructs the pipeline context to materialize value. ''' check.str_param(o...
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Returns transformed value either for DEFAULT_OUTPUT or for the output given as output_name. Returns None if execution result isn't a success. Reconstructs the pipeline context to materialize value.
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python
test
39.727273
mulkieran/justbases
src/justbases/_nats.py
https://github.com/mulkieran/justbases/blob/dd52ff4b3d11609f54b2673599ee4eeb20f9734f/src/justbases/_nats.py#L124-L160
def carry_in(value, carry, base): """ Add a carry digit to a number represented by ``value``. :param value: the value :type value: list of int :param int carry: the carry digit (>= 0) :param int base: the base (>= 2) :returns: carry-out and result :rtype...
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Add a carry digit to a number represented by ``value``. :param value: the value :type value: list of int :param int carry: the carry digit (>= 0) :param int base: the base (>= 2) :returns: carry-out and result :rtype: tuple of int * (list of int) Complexity: O(len(val...
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python
train
28.216216
xiaocong/uiautomator
uiautomator/__init__.py
https://github.com/xiaocong/uiautomator/blob/9a0c892ffd056713f91aa2153d1533c5b0553a1c/uiautomator/__init__.py#L619-L632
def screenshot(self, filename, scale=1.0, quality=100): '''take screenshot.''' result = self.server.screenshot(filename, scale, quality) if result: return result device_file = self.server.jsonrpc.takeScreenshot("screenshot.png", ...
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take screenshot.
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python
train
41.642857
jilljenn/tryalgo
tryalgo/eulerian_tour.py
https://github.com/jilljenn/tryalgo/blob/89a4dd9655e7b6b0a176f72b4c60d0196420dfe1/tryalgo/eulerian_tour.py#L41-L63
def eulerian_tour_directed(graph): """Eulerian tour on a directed graph :param graph: directed graph in listlist format, cannot be listdict :assumes: graph is eulerian :returns: eulerian cycle as a vertex list :complexity: `O(|V|+|E|)` """ P = [] Q = [0] R = [] succ ...
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Eulerian tour on a directed graph :param graph: directed graph in listlist format, cannot be listdict :assumes: graph is eulerian :returns: eulerian cycle as a vertex list :complexity: `O(|V|+|E|)`
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python
train
26.695652
cgarciae/phi
phi/dsl.py
https://github.com/cgarciae/phi/blob/87fd7100a76f823232f4fd8360498b4b80675265/phi/dsl.py#L930-L973
def With(self, context_manager, *body, **kwargs): """ **With** def With(context_manager, *body): **Arguments** * **context_manager**: a [context manager](https://docs.python.org/2/reference/datamodel.html#context-managers) object or valid expression from the DSL that returns a context manager. * ***body*...
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**With** def With(context_manager, *body): **Arguments** * **context_manager**: a [context manager](https://docs.python.org/2/reference/datamodel.html#context-managers) object or valid expression from the DSL that returns a context manager. * ***body**: any valid expression of the DSL to be evaluated inside the ...
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python
train
35.25
taskcluster/taskcluster-client.py
taskcluster/ec2manager.py
https://github.com/taskcluster/taskcluster-client.py/blob/bcc95217f8bf80bed2ae5885a19fa0035da7ebc9/taskcluster/ec2manager.py#L272-L281
def allState(self, *args, **kwargs): """ List out the entire internal state This method is only for debugging the ec2-manager This method is ``experimental`` """ return self._makeApiCall(self.funcinfo["allState"], *args, **kwargs)
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List out the entire internal state This method is only for debugging the ec2-manager This method is ``experimental``
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python
train
27.2
sassoo/goldman
goldman/models/base.py
https://github.com/sassoo/goldman/blob/b72540c9ad06b5c68aadb1b4fa8cb0b716260bf2/goldman/models/base.py#L157-L180
def to_exceptions(cls, errors): """ Convert the validation errors into ValidationFailure exc's Transform native schematics validation errors into a goldman ValidationFailure exception. :param errors: dict of errors in schematics format :return: list of V...
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Convert the validation errors into ValidationFailure exc's Transform native schematics validation errors into a goldman ValidationFailure exception. :param errors: dict of errors in schematics format :return: list of ValidationFailure exception objects
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python
train
28.458333
LordDarkula/chess_py
chess_py/core/algebraic/converter.py
https://github.com/LordDarkula/chess_py/blob/14bebc2f8c49ae25c59375cc83d0b38d8ff7281d/chess_py/core/algebraic/converter.py#L105-L305
def incomplete_alg(alg_str, input_color, position): """ Converts a string written in short algebraic form into an incomplete move. These incomplete moves do not have the initial location specified and therefore cannot be used to update the board. IN order to fully utilize incomplete move, it must be...
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Converts a string written in short algebraic form into an incomplete move. These incomplete moves do not have the initial location specified and therefore cannot be used to update the board. IN order to fully utilize incomplete move, it must be run through ``make_legal()`` with the corresponding positio...
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python
train
51.288557
apache/airflow
airflow/contrib/hooks/gcp_transfer_hook.py
https://github.com/apache/airflow/blob/b69c686ad8a0c89b9136bb4b31767257eb7b2597/airflow/contrib/hooks/gcp_transfer_hook.py#L246-L262
def get_transfer_operation(self, operation_name): """ Gets an transfer operation in Google Storage Transfer Service. :param operation_name: (Required) Name of the transfer operation. :type operation_name: str :return: transfer operation See: https://cloud...
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Gets an transfer operation in Google Storage Transfer Service. :param operation_name: (Required) Name of the transfer operation. :type operation_name: str :return: transfer operation See: https://cloud.google.com/storage-transfer/docs/reference/rest/v1/Operation ...
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python
test
33.882353
portfors-lab/sparkle
sparkle/acq/daq_tasks.py
https://github.com/portfors-lab/sparkle/blob/5fad1cf2bec58ec6b15d91da20f6236a74826110/sparkle/acq/daq_tasks.py#L211-L219
def write(self,output): """Writes the data to be output to the device buffer :param output: data to output :type output: numpy.ndarray """ w = c_int32() self.WriteAnalogF64(self.npoints, 0, 10.0, DAQmx_Val_GroupByChannel, output, w, No...
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Writes the data to be output to the device buffer :param output: data to output :type output: numpy.ndarray
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python
train
35.111111
ioam/parambokeh
parambokeh/__init__.py
https://github.com/ioam/parambokeh/blob/fb9744f216273c7b24e65d037b1d621c08d7fde6/parambokeh/__init__.py#L80-L94
def process_hv_plots(widgets, plots): """ Temporary fix to patch HoloViews plot comms """ bokeh_plots = [] for plot in plots: if hasattr(plot, '_update_callbacks'): for subplot in plot.traverse(lambda x: x): subplot.comm = widgets.server_comm for c...
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Temporary fix to patch HoloViews plot comms
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python
test
35.466667
lltk/lltk
lltk/fr/scrapers/verbix.py
https://github.com/lltk/lltk/blob/d171de55c1b97695fddedf4b02401ae27bf1d634/lltk/fr/scrapers/verbix.py#L23-L30
def _normalize(self, string): ''' Returns a sanitized string. ''' string = super(VerbixFr, self)._normalize(string) string = string.replace('il; elle', 'il/elle') string = string.replace('ils; elles', 'ils/elles') string = string.strip() return string
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Returns a sanitized string.
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python
train
32.125
unfoldingWord-dev/python-gogs-client
gogs_client/interface.py
https://github.com/unfoldingWord-dev/python-gogs-client/blob/b7f27f4995abf914c0db8a424760f5b27331939d/gogs_client/interface.py#L197-L213
def get_branch(self, auth, username, repo_name, branch_name): """ Returns the branch with name ``branch_name`` in the repository with name ``repo_name`` owned by the user with username ``username``. :param auth.Authentication auth: authentication object :param str username: use...
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python
train
52
ajenhl/tacl
tacl/data_store.py
https://github.com/ajenhl/tacl/blob/b8a343248e77f1c07a5a4ac133a9ad6e0b4781c2/tacl/data_store.py#L440-L444
def _drop_indices(self): """Drops the database indices relating to n-grams.""" self._logger.info('Dropping database indices') self._conn.execute(constants.DROP_TEXTNGRAM_INDEX_SQL) self._logger.info('Finished dropping database indices')
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Drops the database indices relating to n-grams.
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python
train
52.8
ambitioninc/django-entity
entity/models.py
https://github.com/ambitioninc/django-entity/blob/ebc61f34313c52f4ef5819eb1da25b2ad837e80c/entity/models.py#L128-L145
def is_sub_to_any_kind(self, *super_entity_kinds): """ Find all entities that have super_entities of any of the specified kinds """ if super_entity_kinds: # get the pks of the desired subs from the relationships table if len(super_entity_kinds) == 1: ...
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Find all entities that have super_entities of any of the specified kinds
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python
train
50.888889
Ouranosinc/xclim
xclim/utils.py
https://github.com/Ouranosinc/xclim/blob/2080d139188bd8de2aeca097a025c2d89d6e0e09/xclim/utils.py#L593-L627
def percentile_doy(arr, window=5, per=.1): """Percentile value for each day of the year Return the climatological percentile over a moving window around each day of the year. Parameters ---------- arr : xarray.DataArray Input data. window : int Number of days around each day of the...
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Percentile value for each day of the year Return the climatological percentile over a moving window around each day of the year. Parameters ---------- arr : xarray.DataArray Input data. window : int Number of days around each day of the year to include in the calculation. per : flo...
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python
train
33.685714
Kortemme-Lab/klab
klab/deprecated/rosettadb.py
https://github.com/Kortemme-Lab/klab/blob/6d410ad08f1bd9f7cbbb28d7d946e94fbaaa2b6b/klab/deprecated/rosettadb.py#L699-L705
def _getFieldsInDB(self, tablename): """get all the fields from a specific table""" SQL = 'SELECT COLUMN_NAME FROM INFORMATION_SCHEMA.Columns where TABLE_NAME="%s"' % tablename array_data = self.execQuery(SQL) return [x[0] for x in array_data]
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get all the fields from a specific table
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python
train
35.714286
apple/turicreate
deps/src/cmake-3.13.4/Source/cmConvertMSBuildXMLToJSON.py
https://github.com/apple/turicreate/blob/74514c3f99e25b46f22c6e02977fe3da69221c2e/deps/src/cmake-3.13.4/Source/cmConvertMSBuildXMLToJSON.py#L100-L168
def main(): """Script entrypoint.""" # Parse the arguments parser = argparse.ArgumentParser( description='Convert MSBuild XML to JSON format') parser.add_argument( '-t', '--toolchain', help='The name of the toolchain', required=True) parser.add_argument( '-o', '--output', he...
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Script entrypoint.
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python
train
29.304348
singingwolfboy/flask-dance
flask_dance/contrib/slack.py
https://github.com/singingwolfboy/flask-dance/blob/87d45328bbdaff833559a6d3da71461fe4579592/flask_dance/contrib/slack.py#L22-L88
def make_slack_blueprint( client_id=None, client_secret=None, scope=None, redirect_url=None, redirect_to=None, login_url=None, authorized_url=None, session_class=None, storage=None, ): """ Make a blueprint for authenticating with Slack using OAuth 2. This requires a clien...
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Make a blueprint for authenticating with Slack using OAuth 2. This requires a client ID and client secret from Slack. You should either pass them to this constructor, or make sure that your Flask application config defines them, using the variables :envvar:`SLACK_OAUTH_CLIENT_ID` and :envvar:`SLACK_OAUT...
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python
train
40.701493
gccxml/pygccxml
pygccxml/declarations/pointer_traits.py
https://github.com/gccxml/pygccxml/blob/2b1efbb9e37ceb2ae925c7f3ce1570f476db9e1e/pygccxml/declarations/pointer_traits.py#L68-L79
def value_type(type_): """returns reference to `boost::shared_ptr` \ or `std::shared_ptr` value type""" if not smart_pointer_traits.is_smart_pointer(type_): raise TypeError( 'Type "%s" is not an instantiation of \ boost::shared_ptr or std::shared_ptr' ...
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returns reference to `boost::shared_ptr` \ or `std::shared_ptr` value type
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python
train
44.25
IvanMalison/okcupyd
okcupyd/util/fetchable.py
https://github.com/IvanMalison/okcupyd/blob/46f4eaa9419098f6c299738ce148af55c64deb64/okcupyd/util/fetchable.py#L137-L160
def refresh(self, nice_repr=True, **kwargs): """ :param nice_repr: Append the repr of a list containing the items that have been fetched to this point by the fetcher. :type nice_repr: bool :param kwargs: kwargs that should be passed to the fetcher when its ...
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:param nice_repr: Append the repr of a list containing the items that have been fetched to this point by the fetcher. :type nice_repr: bool :param kwargs: kwargs that should be passed to the fetcher when its fetch method is called. These are merged with t...
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python
train
46.375
bmcfee/pumpp
pumpp/feature/cqt.py
https://github.com/bmcfee/pumpp/blob/06a17b888271dd1f6cd41bddb22b0eb04d494056/pumpp/feature/cqt.py#L141-L160
def transform_audio(self, y): '''Compute the CQT with unwrapped phase Parameters ---------- y : np.ndarray The audio buffer Returns ------- data : dict data['mag'] : np.ndarray, shape=(n_frames, n_bins) CQT magnitude ...
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Compute the CQT with unwrapped phase Parameters ---------- y : np.ndarray The audio buffer Returns ------- data : dict data['mag'] : np.ndarray, shape=(n_frames, n_bins) CQT magnitude data['dphase'] : np.ndarray, shap...
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python
train
27.95
etal/biofrills
biofrills/alnutils.py
https://github.com/etal/biofrills/blob/36684bb6c7632f96215e8b2b4ebc86640f331bcd/biofrills/alnutils.py#L86-L92
def col_counts(col, weights=None, gap_chars='-.'): """Absolute counts of each residue type in a single column.""" cnt = defaultdict(float) for aa, wt in zip(col, weights): if aa not in gap_chars: cnt[aa] += wt return cnt
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Absolute counts of each residue type in a single column.
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python
train
35.714286
beetbox/audioread
audioread/__init__.py
https://github.com/beetbox/audioread/blob/c8bedf7880f13a7b7488b108aaf245d648674818/audioread/__init__.py#L92-L116
def audio_open(path, backends=None): """Open an audio file using a library that is available on this system. The optional `backends` parameter can be a list of audio file classes to try opening the file with. If it is not provided, `audio_open` tries all available backends. If you call this functio...
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Open an audio file using a library that is available on this system. The optional `backends` parameter can be a list of audio file classes to try opening the file with. If it is not provided, `audio_open` tries all available backends. If you call this function many times, you can avoid the cost of ...
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python
train
32.88
visualfabriq/bquery
bquery/ctable.py
https://github.com/visualfabriq/bquery/blob/3702e974696e22876944a3339affad2f29e1ee06/bquery/ctable.py#L742-L819
def where_terms_factorization_check(self, term_list): """ check for where terms if they are applicable Create a boolean array where `term_list` is true. A terms list has a [(col, operator, value), ..] construction. Eg. [('sales', '>', 2), ('state', 'in', ['IL', 'AR'])] :...
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check for where terms if they are applicable Create a boolean array where `term_list` is true. A terms list has a [(col, operator, value), ..] construction. Eg. [('sales', '>', 2), ('state', 'in', ['IL', 'AR'])] :param term_list: :param outcols: :param limit: :pa...
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python
train
39.589744
JdeRobot/base
src/drivers/MAVLinkServer/MAVProxy/modules/mavproxy_map/mp_slipmap_ui.py
https://github.com/JdeRobot/base/blob/303b18992785b2fe802212f2d758a60873007f1f/src/drivers/MAVLinkServer/MAVProxy/modules/mavproxy_map/mp_slipmap_ui.py#L324-L360
def update_position(self): '''update position text''' state = self.state pos = self.mouse_pos newtext = '' alt = 0 if pos is not None: (lat,lon) = self.coordinates(pos.x, pos.y) newtext += 'Cursor: %f %f (%s)' % (lat, lon, mp_util.latlon_to_grid((l...
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update position text
[ "update", "position", "text" ]
python
train
49.081081
SciTools/biggus
biggus/_init.py
https://github.com/SciTools/biggus/blob/0a76fbe7806dd6295081cd399bcb76135d834d25/biggus/_init.py#L3198-L3232
def _sliced_shape(shape, keys): """ Returns the shape that results from slicing an array of the given shape by the given keys. >>> _sliced_shape(shape=(52350, 70, 90, 180), ... keys=(np.newaxis, slice(None, 10), 3, ... slice(None), slice(2, 3))) (1, 10, 90,...
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Returns the shape that results from slicing an array of the given shape by the given keys. >>> _sliced_shape(shape=(52350, 70, 90, 180), ... keys=(np.newaxis, slice(None, 10), 3, ... slice(None), slice(2, 3))) (1, 10, 90, 1)
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python
train
31.8
cloud9ers/gurumate
environment/lib/python2.7/site-packages/IPython/frontend/qt/console/frontend_widget.py
https://github.com/cloud9ers/gurumate/blob/075dc74d1ee62a8c6b7a8bf2b271364f01629d1e/environment/lib/python2.7/site-packages/IPython/frontend/qt/console/frontend_widget.py#L237-L250
def _tab_pressed(self): """ Called when the tab key is pressed. Returns whether to continue processing the event. """ # Perform tab completion if: # 1) The cursor is in the input buffer. # 2) There is a non-whitespace character before the cursor. text = self._...
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Called when the tab key is pressed. Returns whether to continue processing the event.
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python
test
38.857143
sibirrer/lenstronomy
lenstronomy/Util/image_util.py
https://github.com/sibirrer/lenstronomy/blob/4edb100a4f3f4fdc4fac9b0032d2b0283d0aa1d6/lenstronomy/Util/image_util.py#L165-L182
def coordInImage(x_coord, y_coord, numPix, deltapix): """ checks whether image positions are within the pixel image in units of arcsec if not: remove it :param imcoord: image coordinate (in units of angels) [[x,y,delta,magnification][...]] :type imcoord: (n,4) numpy array :returns: image posit...
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checks whether image positions are within the pixel image in units of arcsec if not: remove it :param imcoord: image coordinate (in units of angels) [[x,y,delta,magnification][...]] :type imcoord: (n,4) numpy array :returns: image positions within the pixel image
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python
train
39.277778
tensorflow/tensorboard
tensorboard/plugins/graph/keras_util.py
https://github.com/tensorflow/tensorboard/blob/8e5f497b48e40f2a774f85416b8a35ac0693c35e/tensorboard/plugins/graph/keras_util.py#L114-L177
def _update_dicts(name_scope, model_layer, input_to_in_layer, model_name_to_output, prev_node_name): """Updates input_to_in_layer, model_name_to_output, and prev_node_name based on the model_layer. Args: name_scope: a string representing...
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Updates input_to_in_layer, model_name_to_output, and prev_node_name based on the model_layer. Args: name_scope: a string representing a scope name, similar to that of tf.name_scope. model_layer: a dict representing a Keras model configuration. input_to_in_layer: a dict mapping Keras.layers.Input to inb...
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python
train
48.609375
bwhite/hadoopy
hadoopy/thirdparty/pyinstaller/PyInstaller/utils/winresource.py
https://github.com/bwhite/hadoopy/blob/ff39b4e6d4e6efaf1f571cf0f2c0e0d7ab28c2d6/hadoopy/thirdparty/pyinstaller/PyInstaller/utils/winresource.py#L69-L78
def update_resources(self, data, type_, names=None, languages=None): """ Update or add resource data. type_ = resource type to update names = a list of resource names to update (None = all) languages = a list of resource languages to update (None = all) ...
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Update or add resource data. type_ = resource type to update names = a list of resource names to update (None = all) languages = a list of resource languages to update (None = all)
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python
train
38.4
aws/sagemaker-python-sdk
src/sagemaker/session.py
https://github.com/aws/sagemaker-python-sdk/blob/a9e724c7d3f5572b68c3903548c792a59d99799a/src/sagemaker/session.py#L692-L710
def wait_for_model_package(self, model_package_name, poll=5): """Wait for an Amazon SageMaker endpoint deployment to complete. Args: endpoint (str): Name of the ``Endpoint`` to wait for. poll (int): Polling interval in seconds (default: 5). Returns: dict: Re...
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Wait for an Amazon SageMaker endpoint deployment to complete. Args: endpoint (str): Name of the ``Endpoint`` to wait for. poll (int): Polling interval in seconds (default: 5). Returns: dict: Return value from the ``DescribeEndpoint`` API.
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python
train
41.631579
aio-libs/aiosparql
aiosparql/escape.py
https://github.com/aio-libs/aiosparql/blob/9aaf313fe71908c2cc4d7a7ab3b5af2dc9e0c99d/aiosparql/escape.py#L11-L35
def escape_any(value): """ Section 4.1.2 defines SPARQL shortened forms https://www.w3.org/TR/2013/REC-sparql11-query-20130321/#QSynLiterals Examples of literal syntax in SPARQL include: "chat" 'chat'@fr with language tag "fr" "xyz"^^<http://example.org/ns/userDatatype> ...
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Section 4.1.2 defines SPARQL shortened forms https://www.w3.org/TR/2013/REC-sparql11-query-20130321/#QSynLiterals Examples of literal syntax in SPARQL include: "chat" 'chat'@fr with language tag "fr" "xyz"^^<http://example.org/ns/userDatatype> "abc"^^appNS:appDataType '...
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python
train
39.4
DLR-RM/RAFCON
source/rafcon/core/library_manager.py
https://github.com/DLR-RM/RAFCON/blob/24942ef1a904531f49ab8830a1dbb604441be498/source/rafcon/core/library_manager.py#L128-L143
def _clean_path(path): """Create a fully fissile absolute system path with no symbolic links and environment variables""" path = path.replace('"', '') path = path.replace("'", '') # Replace ~ with /home/user path = os.path.expanduser(path) # Replace environment variables ...
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Create a fully fissile absolute system path with no symbolic links and environment variables
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python
train
44.1875
pkgw/pwkit
pwkit/astutil.py
https://github.com/pkgw/pwkit/blob/d40957a1c3d2ea34e7ceac2267ee9635135f2793/pwkit/astutil.py#L849-L908
def get_simbad_astrometry_info (ident, items=_simbaditems, debug=False): """Fetch astrometric information from the Simbad web service. Given the name of a source as known to the CDS Simbad service, this function looks up its positional information and returns it in a dictionary. In most cases you shoul...
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Fetch astrometric information from the Simbad web service. Given the name of a source as known to the CDS Simbad service, this function looks up its positional information and returns it in a dictionary. In most cases you should use an :class:`AstrometryInfo` object and its :meth:`~AstrometryInfo.fill_...
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python
train
32.166667
standage/tag
tag/index.py
https://github.com/standage/tag/blob/94686adf57115cea1c5235e99299e691f80ba10b/tag/index.py#L81-L93
def consume(self, entrystream): """ Load a stream of entries into memory. Only Feature objects and sequence-region directives are loaded, all other entries are discarded. """ for entry in entrystream: if isinstance(entry, tag.directive.Directive) and \ ...
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Load a stream of entries into memory. Only Feature objects and sequence-region directives are loaded, all other entries are discarded.
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python
train
38.307692
TeamHG-Memex/eli5
eli5/utils.py
https://github.com/TeamHG-Memex/eli5/blob/371b402a0676295c05e582a2dd591f7af476b86b/eli5/utils.py#L213-L232
def _get_value_indices(names1, names2, lookups): """ >>> _get_value_indices(['foo', 'bar', 'baz'], ['foo', 'bar', 'baz'], ... ['bar', 'foo']) [1, 0] >>> _get_value_indices(['foo', 'bar', 'baz'], ['FOO', 'bar', 'baz'], ... ['bar', 'FOO']) [1, 0] >>> _...
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>>> _get_value_indices(['foo', 'bar', 'baz'], ['foo', 'bar', 'baz'], ... ['bar', 'foo']) [1, 0] >>> _get_value_indices(['foo', 'bar', 'baz'], ['FOO', 'bar', 'baz'], ... ['bar', 'FOO']) [1, 0] >>> _get_value_indices(['foo', 'bar', 'BAZ'], ['foo', 'BAZ', 'baz'...
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python
train
39.25
ui/django-post_office
post_office/mail.py
https://github.com/ui/django-post_office/blob/03e1ffb69829b475402f0f3ecd9f8a90af7da4bd/post_office/mail.py#L169-L178
def get_queued(): """ Returns a list of emails that should be sent: - Status is queued - Has scheduled_time lower than the current time or None """ return Email.objects.filter(status=STATUS.queued) \ .select_related('template') \ .filter(Q(scheduled_time__lte=now()) | Q(schedul...
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Returns a list of emails that should be sent: - Status is queued - Has scheduled_time lower than the current time or None
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python
train
41.8
bjmorgan/vasppy
vasppy/summary.py
https://github.com/bjmorgan/vasppy/blob/cc2d1449697b17ee1c43715a02cddcb1139a6834/vasppy/summary.py#L77-L90
def find_vasp_calculations(): """ Returns a list of all subdirectories that contain either a vasprun.xml file or a compressed vasprun.xml.gz file. Args: None Returns: (List): list of all VASP calculation subdirectories. """ dir_list = [ './' + re.sub( r'vasprun\.xml', '', p...
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Returns a list of all subdirectories that contain either a vasprun.xml file or a compressed vasprun.xml.gz file. Args: None Returns: (List): list of all VASP calculation subdirectories.
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python
train
38.428571
mlperf/training
image_classification/tensorflow/official/resnet/imagenet_main.py
https://github.com/mlperf/training/blob/1c6ae725a81d15437a2b2df05cac0673fde5c3a4/image_classification/tensorflow/official/resnet/imagenet_main.py#L120-L145
def parse_record(raw_record, is_training, dtype): """Parses a record containing a training example of an image. The input record is parsed into a label and image, and the image is passed through preprocessing steps (cropping, flipping, and so on). Args: raw_record: scalar Tensor tf.string containing a ser...
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Parses a record containing a training example of an image. The input record is parsed into a label and image, and the image is passed through preprocessing steps (cropping, flipping, and so on). Args: raw_record: scalar Tensor tf.string containing a serialized Example protocol buffer. is_training:...
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python
train
34.076923
pandas-dev/pandas
pandas/core/reshape/pivot.py
https://github.com/pandas-dev/pandas/blob/9feb3ad92cc0397a04b665803a49299ee7aa1037/pandas/core/reshape/pivot.py#L391-L528
def crosstab(index, columns, values=None, rownames=None, colnames=None, aggfunc=None, margins=False, margins_name='All', dropna=True, normalize=False): """ Compute a simple cross tabulation of two (or more) factors. By default computes a frequency table of the factors unless an arr...
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Compute a simple cross tabulation of two (or more) factors. By default computes a frequency table of the factors unless an array of values and an aggregation function are passed. Parameters ---------- index : array-like, Series, or list of arrays/Series Values to group by in the rows. c...
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python
train
35.173913
mitsei/dlkit
dlkit/json_/grading/sessions.py
https://github.com/mitsei/dlkit/blob/445f968a175d61c8d92c0f617a3c17dc1dc7c584/dlkit/json_/grading/sessions.py#L2755-L2777
def alias_grade_entry(self, grade_entry_id, alias_id): """Adds an ``Id`` to a ``GradeEntry`` for the purpose of creating compatibility. The primary ``Id`` of the ``GradeEntry`` is determined by the provider. The new ``Id`` performs as an alias to the primary ``Id``. If the alias is a po...
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Adds an ``Id`` to a ``GradeEntry`` for the purpose of creating compatibility. The primary ``Id`` of the ``GradeEntry`` is determined by the provider. The new ``Id`` performs as an alias to the primary ``Id``. If the alias is a pointer to another grade entry, it is reassigned to the give...
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python
train
49.217391
ewels/MultiQC
multiqc/modules/samblaster/samblaster.py
https://github.com/ewels/MultiQC/blob/2037d6322b2554146a74efbf869156ad20d4c4ec/multiqc/modules/samblaster/samblaster.py#L69-L109
def parse_samblaster(self, f): """ Go through log file looking for samblaster output. If the Grab the name from the RG tag of the preceding bwa command """ dups_regex = "samblaster: (Removed|Marked) (\d+) of (\d+) \((\d+.\d+)%\) read ids as duplicates" input_file_regex = "samblas...
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Go through log file looking for samblaster output. If the Grab the name from the RG tag of the preceding bwa command
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python
train
44.195122
iotile/coretools
iotileship/iotile/ship/recipe.py
https://github.com/iotile/coretools/blob/2d794f5f1346b841b0dcd16c9d284e9bf2f3c6ec/iotileship/iotile/ship/recipe.py#L378-L400
def _prepare_resources(self, variables, overrides=None): """Create and optionally open all shared resources.""" if overrides is None: overrides = {} res_map = {} own_map = {} for decl in self.resources.values(): resource = overrides.get(decl.name) ...
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Create and optionally open all shared resources.
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python
train
27.043478
edx/XBlock
xblock/runtime.py
https://github.com/edx/XBlock/blob/368bf46e2c0ee69bbb21817f428c4684936e18ee/xblock/runtime.py#L820-L831
def render_child(self, child, view_name=None, context=None): """A shortcut to render a child block. Use this method to render your children from your own view function. If `view_name` is not provided, it will default to the view name you're being rendered with. Returns the sam...
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A shortcut to render a child block. Use this method to render your children from your own view function. If `view_name` is not provided, it will default to the view name you're being rendered with. Returns the same value as :func:`render`.
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python
train
34.583333
inspirehep/inspire-schemas
inspire_schemas/builders/literature.py
https://github.com/inspirehep/inspire-schemas/blob/34bc124b62fba565b6b40d1a3c15103a23a05edb/inspire_schemas/builders/literature.py#L596-L608
def add_public_note(self, public_note, source=None): """Add public note. :param public_note: public note for the current article. :type public_note: string :param source: source for the given notes. :type source: string """ self._append_to('public_notes', self._...
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Add public note. :param public_note: public note for the current article. :type public_note: string :param source: source for the given notes. :type source: string
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python
train
29.461538
honzajavorek/redis-collections
redis_collections/sets.py
https://github.com/honzajavorek/redis-collections/blob/07ca8efe88fb128f7dc7319dfa6a26cd39b3776b/redis_collections/sets.py#L102-L129
def isdisjoint(self, other): """ Return ``True`` if the set has no elements in common with *other*. Sets are disjoint if and only if their intersection is the empty set. :param other: Any kind of iterable. :rtype: boolean """ def isdisjoint_trans_pure(pipe): ...
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Return ``True`` if the set has no elements in common with *other*. Sets are disjoint if and only if their intersection is the empty set. :param other: Any kind of iterable. :rtype: boolean
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python
train
35.142857
jilljenn/tryalgo
tryalgo/bellman_ford.py
https://github.com/jilljenn/tryalgo/blob/89a4dd9655e7b6b0a176f72b4c60d0196420dfe1/tryalgo/bellman_ford.py#L8-L35
def bellman_ford(graph, weight, source=0): """ Single source shortest paths by Bellman-Ford :param graph: directed graph in listlist or listdict format :param weight: can be negative. in matrix format or same listdict graph :returns: distance table, precedence table, bool :explan...
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Single source shortest paths by Bellman-Ford :param graph: directed graph in listlist or listdict format :param weight: can be negative. in matrix format or same listdict graph :returns: distance table, precedence table, bool :explanation: bool is True if a negative circuit is ...
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python
train
36.642857
kmadac/bitstamp-python-client
bitstamp/client.py
https://github.com/kmadac/bitstamp-python-client/blob/35b9a61f3892cc281de89963d210f7bd5757c717/bitstamp/client.py#L56-L64
def _construct_url(self, url, base, quote): """ Adds the orderbook to the url if base and quote are specified. """ if not base and not quote: return url else: url = url + base.lower() + quote.lower() + "/" return url
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Adds the orderbook to the url if base and quote are specified.
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python
train
31.555556
ph4r05/monero-serialize
monero_serialize/xmrboost.py
https://github.com/ph4r05/monero-serialize/blob/cebb3ba2aaf2e9211b1dcc6db2bab02946d06e42/monero_serialize/xmrboost.py#L361-L389
async def container(self, container=None, container_type=None, params=None): """ Loads/dumps container :return: """ # Container versioning is a bit tricky, primitive type containers are not versioned. elem_type = x.container_elem_type(container_type, params) raw_c...
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Loads/dumps container :return:
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python
train
46.310345
googleads/googleads-python-lib
googleads/adwords.py
https://github.com/googleads/googleads-python-lib/blob/aa3b1b474b0f9789ca55ca46f4b2b57aeae38874/googleads/adwords.py#L969-L1008
def Load(cls, file_input, client=None): """Loads an IncrementalUploadHelper from the given file-like object. Args: file_input: a file-like object containing a serialized IncrementalUploadHelper. client: an AdWordsClient instance. If not specified, an AdWordsClient will be instantiat...
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Loads an IncrementalUploadHelper from the given file-like object. Args: file_input: a file-like object containing a serialized IncrementalUploadHelper. client: an AdWordsClient instance. If not specified, an AdWordsClient will be instantiated using the default configuration file. R...
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python
train
37.225
tcalmant/ipopo
pelix/framework.py
https://github.com/tcalmant/ipopo/blob/2f9ae0c44cd9c34ef1a9d50837b3254e75678eb1/pelix/framework.py#L547-L559
def uninstall(self): """ Uninstalls the bundle """ with self._lock: if self._state == Bundle.ACTIVE: self.stop() # Change the bundle state self._state = Bundle.UNINSTALLED # Call the framework self.__framework....
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Uninstalls the bundle
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python
train
25.384615
google/transitfeed
gtfsscheduleviewer/marey_graph.py
https://github.com/google/transitfeed/blob/eb2991a3747ba541b2cb66502b305b6304a1f85f/gtfsscheduleviewer/marey_graph.py#L298-L354
def _DrawTrips(self,triplist,colpar=""): """Generates svg polylines for each transit trip. Args: # Class Trip is defined in transitfeed.py [Trip, Trip, ...] Returns: # A string containing a polyline tag for each trip ' <polyline class="T" stroke="#336633" points="433,0 ...' """...
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Generates svg polylines for each transit trip. Args: # Class Trip is defined in transitfeed.py [Trip, Trip, ...] Returns: # A string containing a polyline tag for each trip ' <polyline class="T" stroke="#336633" points="433,0 ...'
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python
train
36.385965
markuskiller/textblob-de
textblob_de/ext/_pattern/text/tree.py
https://github.com/markuskiller/textblob-de/blob/1b427b2cdd7e5e9fd3697677a98358fae4aa6ad1/textblob_de/ext/_pattern/text/tree.py#L708-L728
def append(self, word, lemma=None, type=None, chunk=None, role=None, relation=None, pnp=None, anchor=None, iob=None, custom={}): """ Appends the next word to the sentence / chunk / preposition. For example: Sentence.append("clawed", "claw", "VB", "VP", role=None, relation=1) - word :...
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Appends the next word to the sentence / chunk / preposition. For example: Sentence.append("clawed", "claw", "VB", "VP", role=None, relation=1) - word : the current word, - lemma : the canonical form of the word, - type : part-of-speech tag for the word (NN, JJ,...
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python
train
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hyperledger/indy-sdk
wrappers/python/indy/wallet.py
https://github.com/hyperledger/indy-sdk/blob/55240dc170308d7883c48f03f308130a6d077be6/wrappers/python/indy/wallet.py#L320-L351
async def generate_wallet_key(config: Optional[str]) -> str: """ Generate wallet master key. Returned key is compatible with "RAW" key derivation method. It allows to avoid expensive key derivation for use cases when wallet keys can be stored in a secure enclave. :param config: (optional) key confi...
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Generate wallet master key. Returned key is compatible with "RAW" key derivation method. It allows to avoid expensive key derivation for use cases when wallet keys can be stored in a secure enclave. :param config: (optional) key configuration json. { "seed": string, (optional) Seed that allows...
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python
train
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jasonbot/arcrest
arcrest/server.py
https://github.com/jasonbot/arcrest/blob/b1ba71fd59bb6349415e7879d753d307dbc0da26/arcrest/server.py#L483-L487
def url(self): """The URL as a string of the resource.""" if not self._url[2].endswith('/'): self._url[2] += '/' return RestURL.url.__get__(self)
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python
train
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sebp/scikit-survival
sksurv/setup.py
https://github.com/sebp/scikit-survival/blob/cfc99fd20454cdd6f4f20fe331b39f2191ccaabc/sksurv/setup.py#L39-L74
def maybe_cythonize_extensions(top_path, config): """Tweaks for building extensions between release and development mode.""" is_release = os.path.exists(os.path.join(top_path, 'PKG-INFO')) if is_release: build_from_c_and_cpp_files(config.ext_modules) else: message = ('Please install cyt...
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Tweaks for building extensions between release and development mode.
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python
train
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tanghaibao/goatools
goatools/rpt/nts_xfrm.py
https://github.com/tanghaibao/goatools/blob/407682e573a108864a79031f8ca19ee3bf377626/goatools/rpt/nts_xfrm.py#L22-L33
def mknts(self, add_dct): """Add information from add_dct to a new copy of namedtuples stored in nts.""" nts = [] assert len(add_dct) == len(self.nts) flds = list(next(iter(self.nts))._fields) + list(next(iter(add_dct)).keys()) ntobj = cx.namedtuple("ntgoea", " ".join(flds)) ...
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Add information from add_dct to a new copy of namedtuples stored in nts.
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python
train
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maxzheng/bumper-lib
bumper/cars.py
https://github.com/maxzheng/bumper-lib/blob/32a9dec5448673825bb2d7d92fa68882b597f794/bumper/cars.py#L91-L145
def add(self, requirements, required=None): """ Add requirements to be managed :param list/Requirement requirements: List of :class:`BumpRequirement` or :class:`pkg_resources.Requirement` :param bool required: Set required flag for each requirement if provided. """ if is...
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python
valid
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spotify/luigi
luigi/configuration/core.py
https://github.com/spotify/luigi/blob/c5eca1c3c3ee2a7eb612486192a0da146710a1e9/luigi/configuration/core.py#L61-L87
def add_config_path(path): """Select config parser by file extension and add path into parser. """ if not os.path.isfile(path): warnings.warn("Config file does not exist: {path}".format(path=path)) return False # select parser by file extension _base, ext = os.path.splitext(path) ...
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Select config parser by file extension and add path into parser.
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python
train
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PureStorage-OpenConnect/rest-client
purestorage/purestorage.py
https://github.com/PureStorage-OpenConnect/rest-client/blob/097d5f2bc6facf607d7e4a92567b09fb8cf5cb34/purestorage/purestorage.py#L3211-L3232
def get_certificate(self, **kwargs): """Get the attributes of the current array certificate. :param \*\*kwargs: See the REST API Guide on your array for the documentation on the request: **GET cert** :type \*\*kwargs: optional :retu...
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Get the attributes of the current array certificate. :param \*\*kwargs: See the REST API Guide on your array for the documentation on the request: **GET cert** :type \*\*kwargs: optional :returns: A dictionary describing the configured arra...
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python
train
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tensorflow/probability
tensorflow_probability/python/distributions/hidden_markov_model.py
https://github.com/tensorflow/probability/blob/e87fe34111d68c35db0f9eeb4935f1ece9e1a8f5/tensorflow_probability/python/distributions/hidden_markov_model.py#L926-L933
def _extract_log_probs(num_states, dist): """Tabulate log probabilities from a batch of distributions.""" states = tf.reshape(tf.range(num_states), tf.concat([[num_states], tf.ones_like(dist.batch_shape_tensor())], axis=0)) re...
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Tabulate log probabilities from a batch of distributions.
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python
test
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cmbruns/pyopenvr
src/openvr/__init__.py
https://github.com/cmbruns/pyopenvr/blob/68395d26bb3df6ab1f0f059c38d441f962938be6/src/openvr/__init__.py#L5466-L5471
def renderModelHasComponent(self, pchRenderModelName, pchComponentName): """Returns true if the render model has a component with the specified name""" fn = self.function_table.renderModelHasComponent result = fn(pchRenderModelName, pchComponentName) return result
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python
train
48.666667
pypa/pipenv
pipenv/patched/pipfile/api.py
https://github.com/pypa/pipenv/blob/cae8d76c210b9777e90aab76e9c4b0e53bb19cde/pipenv/patched/pipfile/api.py#L176-L181
def lock(self): """Returns a JSON representation of the Pipfile.""" data = self.data data['_meta']['hash'] = {"sha256": self.hash} data['_meta']['pipfile-spec'] = 6 return json.dumps(data, indent=4, separators=(',', ': '))
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Returns a JSON representation of the Pipfile.
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python
train
42.833333