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Datasets:
lucapinello
/
crisprme-data

Tags:
crispr
off-target
genomics
crisprme
reference-data
License:
Dataset card Files
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crisprme-data

Commit History

2 days ago

  1. Upload indexes/genotypes_hg38_HPRC.tar.gz with huggingface_hub

    lucapinello
    Verified signature
    17eeacf

  2. Upload indexes/NRR_3_hg38+hg38_HPRC.tar.gz with huggingface_hub

    lucapinello
    Verified signature
    371889c

  3. Upload indexes/NRR_3_hg38+hg38_mega.tar.gz with huggingface_hub

    lucapinello
    Verified signature
    10977db

4 days ago

  1. Upload indexes/NRR_3_hg38.tar.gz with huggingface_hub

    lucapinello
    Verified signature
    2513b14

  2. Upload indexes/NGG_3_hg38.tar.gz with huggingface_hub

    lucapinello
    Verified signature
    3b6989f

  3. Upload indexes/NNN_3_hg38.tar.gz with huggingface_hub

    lucapinello
    Verified signature
    b0e23e4

  4. Upload indexes/NNN_3_hg38+hg38_HGDP1kGP.tar.gz with huggingface_hub

    lucapinello
    Verified signature
    cab3f4e

  5. Upload indexes/NRR_3_hg38+hg38_HGDP1kGP.tar.gz with huggingface_hub

    lucapinello
    Verified signature
    6187364

  6. Upload indexes/NGG_3_hg38+hg38_HGDP1kGP.tar.gz with huggingface_hub

    lucapinello
    Verified signature
    f750e4b

6 days ago

  1. Card: retire standalone 1000G-2021 index (layout+table+count) + add vcfs/ source-VCF section + build-inputs note

    lucapinello
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    c18cfce

  2. Add hg38_mega samplesID

    lucapinello
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    3f03a0d

  3. Add hg38_mega build-input VCFs (vcfs/hg38_mega) — reproducible index builds (provenance-verified)

    lucapinello
    Verified signature
    f256902

  4. Add hg38_HPRC samplesID

    lucapinello
    Verified signature
    c5aaa2d

  5. Add hg38_HPRC build-input VCFs (vcfs/hg38_HPRC) — reproducible index builds (provenance-verified)

    lucapinello
    Verified signature
    67ebb46

  6. Retire the standalone 1000G-2021 index (superseded by HGDP1kGP; rebuildable from the retained hg38_1000G_2021 source) — reclaim HF space

    lucapinello
    Verified signature
    cd63c4c

  7. Add HGDP1kGP samplesID (needed for a from-scratch variant index build)

    lucapinello
    Verified signature
    a40528d

  8. Add HGDP1kGP build-input VCFs (vcfs/hg38_HGDP1kGP) — reproducible index builds (provenance-verified: samplesID md5-identical to shipped index)

    lucapinello
    Verified signature
    3e4c3b7

18 days ago

  1. Update dataset card: MGBOA 1.0 licence, real index catalog (HGDP1kGP default), fix repo-id + project link

    lucapinello
    Verified signature
    36b9363

  2. Remove stale/superseded indexes (frees ~71 GB)⁠

    lucapinello
    Verified signature
    a210cf3

19 days ago

  1. Upload build-inputs/hg38_mega.SHA256SUMS with huggingface_hub

    lucapinello
    Verified signature
    a04339f

  2. Upload build-inputs/hg38_mega.tar.gz with huggingface_hub

    lucapinello
    Verified signature
    9e9d4fb

  3. Upload build-inputs/hg38_HGDP1kGP.SHA256SUMS with huggingface_hub

    lucapinello
    Verified signature
    677365e

  4. Upload build-inputs/hg38_HGDP1kGP.tar.gz with huggingface_hub

    lucapinello
    Verified signature
    f381cda

20 days ago

  1. Fix 1000G samplesID: filter to the 2548 VCF-genotyped panel (was 3500, over-listed -> AF deflation, #46)

    lucapinello
    Verified signature
    b44d367

22 days ago

  1. Upload indexes/genotypes_hg38_HGDP1kGP.tar.gz with huggingface_hub

    lucapinello
    Verified signature
    77ec096

  2. Upload indexes/NRG_3_hg38+hg38_HGDP1kGP.tar.gz with huggingface_hub

    lucapinello
    Verified signature
    e9fe518

  1. Upload indexes/genotypes_hg38_1000G2021.tar.gz with huggingface_hub

    lucapinello
    Verified signature
    75795f0

  2. Upload indexes/NRG_3_hg38+hg38_1000G2021.tar.gz with huggingface_hub

    lucapinello
    Verified signature
    37dc116

  1. backfill data_type/phased into NRG_3_hg38+hg38_1000G2021_HGDP registry manifests

    lucapinello
    Verified signature
    085d39a

  2. backfill data_type/phased into NRG_3_hg38+hg38_HPRC registry manifests

    lucapinello
    Verified signature
    8fc597e

  3. backfill data_type/phased into NRG_3_hg38+hg38_mega registry manifests

    lucapinello
    Verified signature
    6630a27

  1. Upload indexes/genotypes_hg38_HPRC.tar.gz with huggingface_hub

    lucapinello
    Verified signature
    5f69cd1

  2. Upload indexes/NRG_3_hg38+hg38_HPRC.tar.gz with huggingface_hub

    lucapinello
    Verified signature
    f24f58a

  1. Add IntOGen (CC0) cancer-driver annotation: intogen_drivers.hg38.bed.gz.tbi (2.5.4)

    lucapinello
    Verified signature
    db515ce

  2. Add IntOGen (CC0) cancer-driver annotation: intogen_drivers.hg38.bed.gz (2.5.4)

    lucapinello
    Verified signature
    15526bb

  1. Upload indexes/NRG_3_hg38+hg38_1000G2021_HGDP.tar.gz with huggingface_hub

    lucapinello
    Verified signature
    d9f8867

  1. Upload indexes/NRG_3_hg38+hg38_mega.tar.gz with huggingface_hub

    lucapinello
    Verified signature
    808fd35

  1. Upload indexes/NRG_3_hg38+hg38_mega.tar.gz with huggingface_hub

    lucapinello
    Verified signature
    e8b980b

  1. Upload indexes/NRG_3_hg38+hg38_1000G2021_HGDP.tar.gz with huggingface_hub

    lucapinello
    Verified signature
    2360c75

  1. Upload indexes/genotypes_hg38_1000G2021_HGDP.tar.gz with huggingface_hub

    lucapinello
    Verified signature
    818895e

  2. Upload indexes/NRG_3_hg38+hg38_1000G2021_HGDP.tar.gz with huggingface_hub

    lucapinello
    Verified signature
    88d94ed

  1. v2.4.0: squash history to reclaim LFS storage after trimming raw VCFs + legacy files (current tree unchanged)

    lucapinello
    d1ca637