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Rename run/ to level/; meta-debug values into session_context; sensor voltage/temp; integer Polar ns; analysis figures
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"""Samsung Galaxy Fit3 watch loader -- the non-LEVEL reference (heart rate, cadence, speed).
Fit3 data is day-level: data/<subject>/<day>/fit3/. Two on-disk layouts, same Fit3 object out:
released dataset (our own schema):
fit3_live.csv 10 s samples: time(us), heart_rate, cadence, speed
fit3_summary.csv one row: start_time(us), duration_s, hr_mean/max/min, cadence_mean/max, ...
Samsung Health export ("Download personal data"), staged into fit3/:
live_data.json 10 s samples: heart_rate, cadence, distance, power, speed, start_time(ms)
location_data.json 1 s samples: latitude, longitude, altitude, accuracy, start_time(ms)
exercise_summary.csv the summary CSV -- avg/max HR etc.
Times are epoch-us, on the same clock as the IMU and phone streams.
"""
from __future__ import annotations
import csv
import json
import os
from dataclasses import dataclass
import pandas as pd
LIVE_COLS = ["time", "heart_rate", "cadence", "speed"] # Samsung's `power` is always 0 on the Fit3
@dataclass
class Fit3:
live: pd.DataFrame # time(us), heart_rate, cadence, speed (10 s)
loc: pd.DataFrame # time(us), lat, lon, altitude, accuracy (1 s; Samsung export only)
summary: dict # hr_mean/max/min, cadence_mean/max, mean_speed, duration_min, calorie
def _load_series(fit3_dir: str) -> tuple[pd.DataFrame, pd.DataFrame]:
public = os.path.join(fit3_dir, "fit3_live.csv")
if os.path.exists(public):
live = pd.read_csv(public)
return live[[c for c in LIVE_COLS if c in live]].sort_values("time").reset_index(drop=True), pd.DataFrame()
def js(name):
p = os.path.join(fit3_dir, name)
return json.load(open(p)) if os.path.exists(p) else []
live = pd.DataFrame(js("live_data.json"))
if not live.empty:
live["time"] = live["start_time"].astype("int64") * 1000
live = live[[c for c in LIVE_COLS if c in live]].sort_values("time").reset_index(drop=True)
loc = pd.DataFrame(js("location_data.json"))
if not loc.empty:
loc["time"] = loc["start_time"].astype("int64") * 1000
loc = loc.rename(columns={"latitude": "lat", "longitude": "lon"})
loc = loc[["time", "lat", "lon", "altitude", "accuracy"]].sort_values("time").reset_index(drop=True)
return live, loc
def _parse_summary(fit3_dir: str, start_us: int | None) -> dict:
"""The run's summary: fit3_summary.csv, else the matching row of Samsung's exercise_summary.csv.
Samsung header (line 2) is prefix-labelled (com.samsung.health.exercise.<field>); rows carry one extra
trailing field, but zip(header, row) aligns the leading columns we need. We pick the running
workout (exercise_type 1002) nearest the session start, else the longest running workout.
"""
pub = os.path.join(fit3_dir, "fit3_summary.csv")
if os.path.exists(pub):
rows = pd.read_csv(pub).to_dict("records")
if not rows:
return {}
r = {k: (None if pd.isna(v) else v) for k, v in rows[0].items()}
return {"start_time": r.get("start_time"), "duration_min": (r.get("duration_s") or 0) / 60.0,
"hr_mean": r.get("hr_mean"), "hr_max": r.get("hr_max"), "hr_min": r.get("hr_min"),
"cadence_mean": r.get("cadence_mean"), "cadence_max": r.get("cadence_max"),
"mean_speed": r.get("speed_mean_mps"), "calorie": r.get("calorie_kcal")}
p = os.path.join(fit3_dir, "exercise_summary.csv")
if not os.path.exists(p):
return {}
lines = open(p, encoding="utf-8-sig").read().splitlines()
if len(lines) < 3:
return {}
hdr = next(csv.reader([lines[1]]))
idx = {h.split(".")[-1]: i for i, h in enumerate(hdr)} # last segment: start_time, duration, ...
def g(row, key, cast=str):
j = idx.get(key)
if j is None or j >= len(row) or row[j] == "":
return None
try:
return cast(row[j])
except ValueError:
return row[j]
best, best_key = None, None
for ln in lines[2:]:
row = next(csv.reader([ln]))
if g(row, "exercise_type") != "1002": # running only
continue
dur = g(row, "duration", float) or 0.0
st = g(row, "start_time") # "YYYY-MM-DD HH:MM:SS.000" (UTC)
key = dur
if start_us is not None and st:
try:
t = pd.Timestamp(st, tz="UTC").value // 1000 # -> epoch us
key = -abs(t - start_us) # nearest start wins
except Exception:
pass
if best_key is None or key > best_key:
best, best_key = row, key
if best is None:
return {}
return {
"start_time": g(best, "start_time"),
"duration_min": (g(best, "duration", float) or 0) / 60000.0,
"hr_mean": g(best, "mean_heart_rate", float),
"hr_max": g(best, "max_heart_rate", float),
"hr_min": g(best, "min_heart_rate", float),
"cadence_mean": g(best, "mean_cadence", float),
"cadence_max": g(best, "max_cadence", float),
"mean_speed": g(best, "mean_speed", float),
"calorie": g(best, "calorie", float),
}
def load_fit3(day_path: str) -> Fit3 | None:
"""Fit3 for one day folder (data/<subject>/<day>), or None if that day has no watch data."""
fit3_dir = os.path.join(day_path, "fit3")
if not os.path.isdir(fit3_dir):
return None
live, loc = _load_series(fit3_dir)
if live.empty and loc.empty:
return None
start_us = int(live["time"].iloc[0]) if not live.empty else int(loc["time"].iloc[0])
return Fit3(live=live, loc=loc, summary=_parse_summary(fit3_dir, start_us))