gt stringclasses 1
value | context stringlengths 2.49k 119k |
|---|---|
r"""
Clustal format (:mod:`skbio.io.format.clustal`)
===============================================
.. currentmodule:: skbio.io.format.clustal
Clustal format (``clustal``) stores multiple sequence alignments. This format
was originally introduced in the Clustal package [1]_.
Format Support
--------------
**Has Snif... | |
# -*- coding: utf-8 -*-
"""Routines for version management.
These module has :py:class:`Version` class which is a base class for
entrypoints ``scd.version``. All entrypoints of such class should be
subclasses of :py:class:`Version`.
Currently, it ``scd.version`` has following defined entrypoints:
+------------+-----... | |
# Copyright 2011,2013,2017 James McCauley
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at:
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed t... | |
#!/usr/bin/env python
# encoding: utf-8
# Thomas Nagy, 2006-2018 (ita)
"""
This tool helps with finding Qt5 tools and libraries,
and also provides syntactic sugar for using Qt5 tools.
The following snippet illustrates the tool usage::
def options(opt):
opt.load('compiler_cxx qt5')
def configure(conf):
conf.lo... | |
#!/usr/bin/env python
# Copyright 2015, Rackspace US, Inc.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law... | |
# coding: utf-8
# PYTHON IMPORTS
import os, re
from types import MethodType
# DJANGO IMPORTS
from django.shortcuts import render_to_response, HttpResponse
from django.template import RequestContext as Context
from django.http import HttpResponseRedirect, HttpResponseBadRequest, Http404
from django.contrib.admin.views... | |
#!/usr/bin/python
################
# The MIT License (MIT)
#
# Copyright (c) <2013> <Martin de Bruyn>
#
# Permission is hereby granted, free of charge, to any person obtaining a copy
# of this software and associated documentation files (the "Software"), to deal
# in the Software without restriction, including withou... | |
# -*- coding: utf-8 -*-
"""
Auth* related model.
This is where the models used by :mod:`repoze.who` and :mod:`repoze.what` are
defined.
It's perfectly fine to re-use this definition in the GAPProject application,
though.
"""
import os
from datetime import datetime
import sys
import random
try:
from hashlib impor... | |
"""The tests for the sun automation."""
from datetime import datetime
import pytest
from unittest.mock import patch
from homeassistant.const import SUN_EVENT_SUNRISE, SUN_EVENT_SUNSET
from homeassistant.setup import async_setup_component
from homeassistant.components import sun
import homeassistant.components.automat... | |
from Observation import Observation
import Cube
from transit import *
import limbdarkening.phoenix as LD
from .imports import *
class TS(Talker):
""" A transmission spectrum object, which can contain depths + uncertainties, lightcurves, covariance matrices."""
def __init__(self, obs=None, binsize=100, remake=Fals... | |
from __future__ import unicode_literals
from __future__ import division
import logging
import threading
from ..elements.elementbase import LogicElement, Attribute
from ..tags.context import DataSetterBase
from .. import namespaces
from ..compat import implements_to_string
from fs.path import basename, join, splitext... | |
# Ensure that loader is imported before loader_tags, or a circular import may happen
# when this file is loaded from an `__init__.py` in an application root.
# The __init__.py files in applications are loaded very early due to the scan of of translation.activate()
import django
import django.template.loader # noqa
# ... | |
"""Z-Wave Constants."""
DOMAIN = "zwave"
ATTR_NODE_ID = "node_id"
ATTR_TARGET_NODE_ID = "target_node_id"
ATTR_ASSOCIATION = "association"
ATTR_INSTANCE = "instance"
ATTR_GROUP = "group"
ATTR_VALUE_ID = "value_id"
ATTR_MESSAGES = "messages"
ATTR_NAME = "name"
ATTR_RETURN_ROUTES = "return_routes"
ATTR_SCENE_ID = "scene_... | |
import ply.lex as lex
import ply.yacc as yacc
reserved = {
'if': 'IF',
'then': 'THEN',
'else': 'ELSE',
'switch': 'SWITCH',
'function': 'FUNCTION',
'do': 'DO',
'done': 'DONE',
'let': 'LET',
'in': 'IN',
'set': 'SET',
'to': 'TO',
'true': 'TRUE',
'false': 'FALSE'
}
toke... | |
def run(command):
print command
os.system(command)
def select_background(filt, out_flag_file):
import tempfile
... | |
# -*- coding: utf-8 -*-
import time
from django.db.models import Q
from django.shortcuts import render
from django.http import HttpResponseRedirect
from django.http import HttpResponseNotFound
from django.contrib.auth.hashers import make_password
from django.contrib.auth.hashers import check_password
from django.views.... | |
#!/usr/bin/env python3
import sys
import zlib
import socket
import struct
import hashlib
import binascii
from pyexfil.includes.prepare import PrepFile
from pyexfil.includes.exceptions import FileDoesNotExist
from pyexfil.includes.general import _split_every_n, does_file_exist
from pyexfil.includes.encryption_wrappers... | |
import functools
import os
import pkgutil
import sys
from argparse import _SubParsersAction
from collections import defaultdict
from difflib import get_close_matches
from importlib import import_module
import django
from django.apps import apps
from django.conf import settings
from django.core.exceptions import Improp... | |
#-----------------------------------------------------------------------------
# Copyright (c) 2012 - 2020, Anaconda, Inc., and Bokeh Contributors.
# All rights reserved.
#
# The full license is in the file LICENSE.txt, distributed with this software.
#-------------------------------------------------------------------... | |
# vim: tabstop=4 shiftwidth=4 softtabstop=4
# Copyright 2010 United States Government as represented by the
# Administrator of the National Aeronautics and Space Administration.
# All Rights Reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License"); you may
# not use this file except in compli... | |
# vim: tabstop=4 shiftwidth=4 softtabstop=4
# Copyright IBM Corp. 2013 All Rights Reserved
#
# Licensed under the Apache License, Version 2.0 (the "License"); you may
# not use this file except in compliance with the License. You may obtain
# a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0... | |
# coding=utf-8
# Copyright 2019 Google LLC
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to ... | |
"""Low-level MediaFire API Client"""
from __future__ import unicode_literals
import hashlib
import requests
import logging
import six
from six.moves.urllib.parse import urlencode
from requests_toolbelt import MultipartEncoder
from requests.adapters import HTTPAdapter
from requests.exceptions import RequestExcepti... | |
# Copyright 2015 The TensorFlow Authors. All Rights Reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applica... | |
# -*- coding: utf-8 -*-
from django.db import models, migrations
class Migration(migrations.Migration):
dependencies = [("users", "0003_auto_20160406_2128")]
operations = [
migrations.AlterField(
model_name="editor",
name="home_wiki",
field=models.CharField(
... | |
from api_lib import APITest
from publish import DefaultSigningOptions
class SnapshotsAPITestCreateShowEmpty(APITest):
"""
GET /api/snapshots/:name, POST /api/snapshots, GET /api/snapshots/:name/packages
"""
def check(self):
snapshot_name = self.random_name()
snapshot_desc = {u'Descript... | |
# Project imports
import os
import sys
sys.path.insert(0, os.path.abspath(os.path.dirname(os.path.dirname(os.path.dirname(os.path.realpath(__file__))))))
import helper
from elodie.localstorage import Db
from elodie import constants
os.environ['TZ'] = 'GMT'
def test_init_writes_files():
db = Db()
assert os.... | |
# Licensed to the Apache Software Foundation (ASF) under one
# or more contributor license agreements. See the NOTICE file
# distributed with this work for additional information
# regarding copyright ownership. The ASF licenses this file
# to you under the Apache License, Version 2.0 (the
# "License"); you may not u... | |
#
# Licensed to the Apache Software Foundation (ASF) under one or more
# contributor license agreements. See the NOTICE file distributed with
# this work for additional information regarding copyright ownership.
# The ASF licenses this file to You under the Apache License, Version 2.0
# (the "License"); you may not us... | |
#!/usr/bin/env python
"""
@package mi.instrument.satlantic.isusv3.ooicore.driver
@file /Users/foley/sandbox/ooici/marine-integrations/mi/instrument/satlantic/isusv3/ooicore/driver.py
@author Steve Foley
@brief Driver for the ooicore
Development notes/todo list:
* Menu handlers need to find the operating mode they wil... | |
#!/usr/bin/env python3
# Copyright 2017 The Kubernetes Authors.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by appl... | |
#!/usr/bin/python
import os
import sys
import tempfile
import getopt
import re
import socket
import logging
import argparse
import xml.etree.ElementTree as ET
logging.basicConfig(level=logging.DEBUG)
try:
import MySQLdb
except ImportError:
print 'This program requires the python MySQLdb module'
sys.exit(10... | |
"""
Collection of classes to extract information from the site.
"""
import re, sys
import socket
import urllib
import urllib.request
from collections import Counter, defaultdict
from html.parser import HTMLParser
def search_for_urlless(cache, matcher, results, printer, fp_category, fps, tmp_set):
for response in c... | |
from collections import defaultdict
from data_structs import PinDirection, ConnectionType
from utils import yield_muxes
from rr_utils import add_node, connect
# =============================================================================
class SwitchboxModel(object):
"""
Represents a model of connectivity ... | |
#!/usr/local/bin/python2.7
#FREEBSD 2 Minutes ARP Expires - /bin/echo "net.link.ether.inet.max_age 300" >> /etc/sysctl.conf
#Crontab -e "* * * * * /usr/local/bin/python2.7 /root/Security.py"
import subprocess
import ConfigParser
import string, os, sys, httplib
import xml.etree.ElementTree as ET
from datetime import da... | |
# Copyright 2013 IBM Corp.
# All Rights Reserved.
#
#
# Licensed under the Apache License, Version 2.0 (the "License"); you may
# not use this file except in compliance with the License. You may obtain
# a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by a... | |
from ...rl import Plant
import numpy as np
import warnings
class SpeedReward(Plant):
"""A :py:class:`Plant` with focus on the speed of the robot.
"""
def __init__(self):
super(SpeedReward, self).__init__(state_space_dim=2)
def state_input(self, state):
"""Return the location, sampl... | |
from __future__ import print_function, division, absolute_import
import os
from time import sleep
import pytest
from toolz import concat, valmap, partial
from dask import compute, get, delayed
from dask.compatibility import FileNotFoundError
from dask.utils import filetexts
from dask.bytes import compression
from da... | |
from __future__ import absolute_import, division, print_function
import pytest
sa = pytest.importorskip('sqlalchemy')
pytest.importorskip('psycopg2')
import os
import itertools
from datashape import dshape
from odo.backends.csv import CSV
from odo import odo, into, resource, drop, discover
from odo.utils import as... | |
import json
import os
import uuid
import xml.etree.cElementTree as ET
from bson.objectid import ObjectId
from clustering.mongo.MongoHandler import MongodbFactory
from clustering.mvn.Mvn import Mvn
from config.config import conf
from error.ErrorHandler import ModuleWriteException, ModuleErrorCompilingException, \
... | |
"""
This module contains functions to solve a single equation for a single variable.
"""
from __future__ import print_function, division
from sympy.core.sympify import sympify
from sympy.core import S, Pow, Dummy, pi, Expr, Wild, Mul, Equality, Symbol
from sympy.core.numbers import I, Number, Rational, oo
from sympy.c... | |
#!/usr/bin/python
from optparse import OptionParser
import fileinput
import sys
from datetime import date
import re
# get start date, end date, and filename from user
def process_input():
parser = OptionParser()
parser.add_option("-f", "--file", dest="filename", help="read from *.ics FILE") #metavar="FILE"??
parse... | |
import os
import os.path
import tempfile
import shutil
import json
from nose.tools import eq_
from nose.tools import with_setup
from build_pack_utils import utils
from build_pack_utils import BuildPack
newrelic = utils.load_extension('extensions/newrelic')
class TestNewRelic(object):
def setUp(self):
se... | |
import os
import random
import sys
import time
import numpy as np
import tensorflow as tf
from global_module.implementation_module import model
from global_module.implementation_module import reader
from global_module.settings_module import set_params, set_dir
iter_train = 0
iter_valid = 0
def run_epoch(session, w... | |
from rethinkengine.connection import get_conn
from rethinkengine.fields import ObjectIdField
from rethinkengine.errors import InvalidQueryError, DoesNotExist
import rethinkdb as r
__all__ = ['QuerySet', 'QuerySetManager']
REPR_SIZE = 20
class QuerySet(object):
def __init__(self, document):
self._docum... | |
# -*- coding: utf-8 -*-
from greendizer.clients.base import extract_id_from_uri
from greendizer.clients.dal import Node
from greendizer.clients.resources import (User, Company, EmailBase,
InvoiceBase, InvoiceNodeBase, AnalyticsBase,
TimespanDigestNode,... | |
# Copyright 2015 Google Inc. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or a... | |
import os
import h5py
import pyroaring as roaring
import pytoml as toml
import re
from scipy import sparse
from . import reversepolish as rpn
MAXROWS = 2**32
class MapFile:
def __init__(self, filepath, mode='r'):
self._mode = mode
try:
fmode = {
'r': 'rb',
... | |
from __future__ import unicode_literals
from django.contrib.auth.models import User
from django.http import HttpResponseRedirect
from django.shortcuts import render, render_to_response
from django.utils.translation import ugettext_lazy as _
from djblets.siteconfig.models import SiteConfiguration
from haystack.inputs i... | |
"""Module for storing/displaying Rust compiler messages."""
import sublime
import collections
import functools
import html
import itertools
import os
import re
import textwrap
import urllib.parse
import uuid
import webbrowser
from . import util, themes, log
from .batch import *
from .levels import *
# Key is window... | |
# -------------------------------------------------------------------------
# Copyright (c) Microsoft Corporation. All rights reserved.
# Licensed under the MIT License. See License.txt in the project root for
# license information.
# --------------------------------------------------------------------------
# pylint: ... | |
# Copyright 2015 Google Inc. All Rights Reserved.
"""Implementation of retrying logic."""
import collections
import functools
import itertools
import random
import sys
import time
_DEFAULT_JITTER_MS = 1000
# TODO(cherba): replace retry logic elsewhere
# (appengine/lib, compute, bigquery ...) with this implementat... | |
import amsoil.core.pluginmanager as pm
from amsoil.core import serviceinterface
import amsoil.core.log
logger=amsoil.core.log.getLogger('gsarpc')
from apiexceptionsv2 import GFedv2NotImplementedError
xmlrpc = pm.getService('xmlrpc')
class GSAv2Handler(xmlrpc.Dispatcher):
"""
Handle XML-RPC Slice Authority A... | |
from __future__ import (division, print_function)
from pomegranate import *
from nose.tools import with_setup
from nose.tools import assert_equal
from nose.tools import assert_not_equal
import random
import numpy as np
def setup():
'''
Build a model that we want to use to test sequences. This model will
be somewh... | |
#! /usr/bin/python3
# Import the GUI library Tkinter
import tkinter
# Import the messagebox module explicitly
from tkinter import messagebox
# Import the webbroswer module for opening a link
import webbrowser
# Import the client module
from ttt_client import TTTClientGame
# Import multi-threading module
import threadi... | |
import json
import sys
import uuid
from textwrap import dedent
from typing import Any, Dict, List
import sqlalchemy
from sqlalchemy.sql.type_api import TypeEngine
from trino.exceptions import TrinoQueryError # noqa
from datahub.ingestion.extractor import schema_util
from datahub.ingestion.source.sql.sql_common impor... | |
# Copyright 2020, Google LLC.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing... | |
# Copyright (c) 2008 Twisted Matrix Laboratories.
# See LICENSE for details.
"""
Tests for L{twisted.web.http_headers}.
"""
import sys
from twisted.python.compat import set
from twisted.trial.unittest import TestCase
from twisted.web.http_headers import _DictHeaders, Headers
class HeadersTests(TestCase):
"""
... | |
# Copyright (C) 2012 Midokura Japan K.K.
# Copyright (C) 2013 Midokura PTE LTD
# All Rights Reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License"); you may
# not use this file except in compliance with the License. You may obtain
# a copy of the License at
#
# http://www.apache.or... | |
import ConfigParser
import hmac
import uuid
import os
import pytest
from mock import patch, Mock
from lecli import api_utils, cli
ID_WITH_VALID_LENGTH = str(uuid.uuid4())
ID_WITH_INVALID_LENGTH = str(uuid.uuid4()) + 'invalid'
MOCK_API_URL = 'http://mydummylink.com'
def test_gensignature():
with patch.object(hm... | |
import test
from nose.tools import *
import numpy as np
import neural
def test_softmax_log_bias():
softmax = neural.layer.Softmax(4, log=True)
softmax.setup(2, 1, neural.layer.Input(3))
assert_equal(len(softmax.weights), 2)
assert_equal(softmax.weights[0].get_value().shape, (3, 4))
assert_equal... | |
"""
Module defining input/output interfaces to HoloViews.
There are two components for input/output:
Exporters: Process (composite) HoloViews objects one at a time. For
instance, an exporter may render a HoloViews object as a
svg or perhaps pickle it.
Archives: A collection of HoloViews objects... | |
# Copyright 2012 Google Inc. All Rights Reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or ag... | |
# -*- coding: utf-8 -*-
# Copyright (c) 2019, Frappe Technologies and contributors
# For license information, please see license.txt
import json
import time
import requests
import frappe
from frappe import _
from frappe.custom.doctype.custom_field.custom_field import create_custom_field
from frappe.frappeclient impo... | |
# Copyright (C) 2014 Ivan Melnikov <iv at altlinux dot org>
#
# Licensed under the Apache License, Version 2.0 (the "License"); you may
# not use this file except in compliance with the License. You may obtain
# a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicab... | |
from pysis.services.base import Service
from uuid import UUID
class Reports(Service):
"""Reports Service
Consumes Reports API: <{url}/reports>
"""
def __init__(self, client):
"""Creates Reports object with a client"""
super(Reports, self).__init__(client)
def getAllReportTypes(sel... | |
# Licensed to the Apache Software Foundation (ASF) under one
# or more contributor license agreements. See the NOTICE file
# distributed with this work for additional information
# regarding copyright ownership. The ASF licenses this file
# to you under the Apache License, Version 2.0 (the
# "License"); you may not u... | |
import copy
import datetime
import os
from django.conf import settings
from django.db.models.fields import Field
from django.core.files.base import File, ContentFile
from django.core.files.storage import default_storage
from django.core.files.images import ImageFile, get_image_dimensions
from django.core.files.uploade... | |
# encoding: utf-8
"""Constant values related to the Open Packaging Convention.
In particular, this includes content (MIME) types and relationship types.
"""
class CONTENT_TYPE(object):
"""Content type URIs (like MIME-types) that specify a part's format."""
ASF = "video/x-ms-asf"
AVI = "video/avi"
B... | |
from django.contrib.gis.geoip import GeoIPException
from django.shortcuts import render_to_response
from django.template import RequestContext
from django.template import loader
from django.template import Context
from django.http import HttpResponseRedirect
from django.contrib.auth.decorators import login_required
fro... | |
# -*- coding: utf-8 -*-
#
# Copyright 2018 Google LLC
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# https://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law... | |
# Copyright 2011 OpenStack Foundation
# All Rights Reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License"); you may
# not use this file except in compliance with the License. You may obtain
# a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless requ... | |
import copy
import re
import numpy as np
from plotly import colors
from ..util import color_intervals, process_cmap
# Constants
# ---------
# Trace types that are individually positioned with their own domain.
# These are traces that don't overlay on top of each other in a shared subplot,
# so they are positioned i... | |
# Licensed under the Apache License, Version 2.0 (the "License"); you may
# not use this file except in compliance with the License. You may obtain
# a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under t... | |
from numpy import array, mean, median, std, size, arange, percentile,\
asarray, zeros, corrcoef, where, unique, array_equal, delete, \
ravel, logical_not, unravel_index, prod, random, shape, \
dot, outer, expand_dims, ScalarType, ndarray, sqrt, pi, angle, fft, \
roll, polyfit, polyval, ceil, float64, fi... | |
from sympy import (binomial, Catalan, cos, Derivative, E, exp, EulerGamma,
factorial, Function, harmonic, Integral, log, nan, oo, pi,
Product, product, Rational, S, sqrt, Sum, summation, Symbol,
symbols, sympify, zeta, oo, I, Abs, Piecewise)
from sympy.abc import... | |
#!/usr/bin/env python3
# Copyright (c) 2014-2019 The Bitcoin Core developers
# Distributed under the MIT software license, see the accompanying
# file COPYING or http://www.opensource.org/licenses/mit-license.php.
"""Test BIP68 implementation."""
import time
from test_framework.blocktools import create_block, create_... | |
# Copyright 2012 Nebula, Inc.
#
# Licensed under the Apache License, Version 2.0 (the "License"); you may
# not use this file except in compliance with the License. You may obtain
# a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agree... | |
#
# Licensed under the Apache License, Version 2.0 (the "License"); you may
# not use this file except in compliance with the License. You may obtain
# a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# ... | |
# Licensed under a 3-clause BSD style license - see LICENSE.rst
"""
Contains a class to handle a validation result for a single VOTable
file.
"""
from __future__ import absolute_import, division, print_function, unicode_literals
from ....extern import six
from ....extern.six.moves import http_client, urllib
from ....e... | |
from datetime import datetime
try:
from functools import lru_cache
except ImportError: # pragma: no cover
from backports.functools_lru_cache import lru_cache
from iso8601 import iso8601
from pyparsing import Word, ZeroOrMore, Literal, Forward, Combine, Optional, Regex, OneOrMore, \
CaselessLiteral, Suppre... | |
# -*- coding: utf-8 -*-
from __future__ import unicode_literals
import mock
import pytest
from soco import SoCo
from soco.exceptions import SoCoUPnPException
IP_ADDR = "192.168.1.101"
@pytest.yield_fixture()
def moco():
"""A mock soco with fake services and hardcoded is_coordinator.
Allows calls to servic... | |
"""
This module is designed to perceive bond types of kappa.Molecule instances.
Design from: http://www.sciencedirect.com/science/article/pii/S1093326305001737
@author: Alex Kerr
"""
import csv
import numpy as np
from ... import package_dir
def main(mol, nstates=2000, mintps=0, maxtps=None):
"""Return the perc... | |
# Copyright 2019 Red Hat, Inc.
# All Rights Reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License"); you may
# not use this file except in compliance with the License. You may obtain
# a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by... | |
from django.db.migrations.graph import (
CircularDependencyError, MigrationGraph, NodeNotFoundError,
)
from django.test import TestCase
from django.utils.encoding import force_text
class GraphTests(TestCase):
"""
Tests the digraph structure.
"""
def test_simple_graph(self):
"""
Te... | |
# Licensed to the Apache Software Foundation (ASF) under one
# or more contributor license agreements. See the NOTICE file
# distributed with this work for additional information
# regarding copyright ownership. The ASF licenses this file
# to you under the Apache License, Version 2.0 (the
# "License"); you may not u... | |
import os
import yaml
import StringIO
import contextlib
import sys
import logging
from traceback import format_tb
import teuthology
from . import report
from .job_status import get_status
from .misc import get_user, merge_configs
from .nuke import nuke
from .run_tasks import run_tasks
from .repo_utils import fetch_qa_... | |
# Copyright 2021 DeepMind Technologies Limited
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agr... | |
# -*- coding: utf-8 -*-
r'''
Install Python packages with pip to either the system or a virtualenv
Windows Support
===============
.. versionadded:: 2014.7.4
Salt now uses a portable python. As a result the entire pip module is now
functional on the salt installation itself. You can pip install dependencies
for your... | |
import sys
import unittest
from flaky import flaky
import pytest
from qtpy import QtCore, QtGui, QtWidgets
from qtpy.QtTest import QTest
from qtconsole.console_widget import ConsoleWidget
from qtconsole.qtconsoleapp import JupyterQtConsoleApp
from . import no_display
if sys.version[0] == '2': # Python 2
from IP... | |
# Copyright 2010 United States Government as represented by the
# Administrator of the National Aeronautics and Space Administration.
# Copyright 2014 Mirantis, Inc.
# All Rights Reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License"); you may
# not use this file except in compliance with the... | |
import datetime
import json
import logging
import requests
import iso8601
import os
from base64 import b64encode
from Crypto import Random
from dateutil.parser import parse as dateutil_parse
from gevent import Greenlet
from hashlib import sha256
from humanize import naturaltime
from operator import itemgetter
from nu... | |
import json
import requests
import os
class ArcGIS:
"""
A class that can download a layer from a map in an
ArcGIS web service and convert it to something useful,
like GeoJSON.
Usage:
>>> import arcgis
>>> source = "http://services.arcgis.com/P3ePLMYs2RVChkJx/ArcGIS/rest/services/USA_Congr... | |
# Licensed under the Apache License, Version 2.0 (the "License"); you may
# not use this file except in compliance with the License. You may obtain
# a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under t... | |
"""
Inspiration: http://scikit-learn.org/stable/auto_examples/classification/plot_classifier_comparison.html
Args:
- retrain binary model with latest image samples
Writes:
- settings for binary model
- clusters reclassified with new model
"""
import os
import numpy as np
import pandas as pd
from sklearn.linear_mod... | |
#!/usr/bin/env python2.5
#
# Copyright 2010 the Melange authors.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applic... | |
# Copyright 2017, Google LLC All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or a... | |
from factory import *
from datetime import datetime
from django.test import TestCase
class DatasetTest(TestCase):
def test_serializeOne(self):
schmog = UserFactory.createRandomUser("test")
table = StructureFactory.createTable(schmog)
datasetF = DatasetForm({"created": datetime.now()})
... | |
#!/usr/bin/env python3
#
# Copyright 2015 Signal Processing Devices Sweden AB. All rights reserved.
#
# Description: ADQ14 FWDAQ streaming example
# Documentation:
#
import numpy as np
import ctypes as ct
import matplotlib.pyplot as plt
import sys
import time
import os
sys.path.insert(1, os.path.dirname(os.path.re... | |
#!/usr/bin/env python
"""
An HTTP server tailored for step-debugging through Emscripten-compiled code
Usage:
debug-emscripten-httpd.py
This will serve the entire contents of the project's directory, along
with all of its subdirectories, to the local machine. It will also
serve files from some key, system-level d... |
Subsets and Splits
No community queries yet
The top public SQL queries from the community will appear here once available.