gt stringclasses 1
value | context stringlengths 2.49k 119k |
|---|---|
# --------------------------------------------------------
# Deformable Convolutional Networks
# Copyright (c) 2017 Microsoft
# Licensed under The MIT License [see LICENSE for details]
# Modified by Yuwen Xiong
# --------------------------------------------------------
# Based on:
# MX-RCNN
# Copyright (c) 2016 by Cont... | |
import asyncio, discord, re, random
from operator import itemgetter
from discord.ext import commands
from Cogs import Utils, DisplayName, Message, PickList
def setup(bot):
# Add the bot and deps
settings = bot.get_cog("Settings")
bot.add_cog(BotAdmin(bot, settings))
class BotAdmin(commands.Cog):
# Init wit... | |
#!/usr/bin/env python2
# RDPy
#
# Copyright (C) 2013 Jeffrey Stiles (@uth_cr33p)(jeff@aerissecure.com)
#
# Todo:
# - switch to asn1tinydecoder.py: http://getreu.net/public/downloads/software/ASN1_decoder/README.html
#
# Thank you to:
# http://labs.portcullis.co.uk/application/rdp-sec-check/
# http://troels.arvin.dk/c... | |
"""Univariate features selection."""
# Authors: V. Michel, B. Thirion, G. Varoquaux, A. Gramfort, E. Duchesnay.
# L. Buitinck, A. Joly
# License: BSD 3 clause
import numpy as np
import warnings
from scipy import special, stats
from scipy.sparse import issparse
from ..base import BaseEstimator
from ..prepr... | |
# pylint: disable=too-many-lines
"""
Component to interface with cameras.
For more details about this component, please refer to the documentation at
https://home-assistant.io/components/camera/
"""
import asyncio
import logging
from aiohttp import web
from homeassistant.helpers.entity import Entity
from homeassista... | |
# -*- coding: utf-8 -*-
import datetime
import logging
import dateutil.parser
import dateutil.tz
from auth import Auth
from elasticsearch import RequestsHttpConnection
from elasticsearch.client import Elasticsearch
logging.basicConfig()
elastalert_logger = logging.getLogger('elastalert')
def new_get_event_ts(ts_fie... | |
# -*- coding: utf-8 -*-
#
# The MIT License (MIT)
#
# Copyright (c) 2013 Ivo Tzvetkov
#
# Permission is hereby granted, free of charge, to any person obtaining a copy of this software and associated documentation files (the "Software"), to deal in the Software without restriction, including without limitation the ri... | |
#
# Licensed under the Apache License, Version 2.0 (the "License"); you may
# not use this file except in compliance with the License. You may obtain
# a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# ... | |
from collections import OrderedDict
from .models import Identifier
from .signals import import_complete, new_metadata
from . import registry, wizard_task, InputNeeded
from django.db import transaction
from django.contrib.contenttypes.models import ContentType
from rest_framework import serializers
from natural_keys i... | |
from django.utils import timezone
from django.shortcuts import render, render_to_response
from django.contrib.auth.decorators import login_required
from django.http import HttpResponseRedirect, HttpResponse
from django.contrib import messages
from .forms import ReportForm, AttachmentForm
import re
from django.db.models... | |
# Copyright 2014 Google Inc. All Rights Reserved.
"""Convenience functions for dealing with instances and instance templates."""
from googlecloudapis.compute.v1 import compute_v1_messages
from googlecloudsdk.calliope import arg_parsers
from googlecloudsdk.calliope import exceptions
from googlecloudsdk.compute.lib impo... | |
#
# Copyright (c) 2013 Juniper Networks, Inc. All rights reserved.
#
import sys
import gevent
sys.path.append("../common/tests")
from testtools.matchers import Equals, Contains, Not
from test_utils import *
import test_common
import test_case
from vnc_api.vnc_api import *
try:
import to_bgp
except ImportError:
... | |
# -*- coding: utf-8 -*-
#
# This file is execfile()d with the current directory set to its containing dir.
#
# Note that not all possible configuration values are present in this
# autogenerated file.
#
# All configuration values have a default; values that are commented out
# serve to show the default.
# stdlib
impor... | |
#!/usr/bin/python3
# Halide tutorial lesson 8
# This lesson demonstrates how schedule multi-stage pipelines.
# This lesson can be built by invoking the command:
# make tutorial_lesson_08_scheduling_2
# in a shell with the current directory at the top of the halide source tree.
# Otherwise, see the platform-specifi... | |
from __future__ import print_function
import argparse
import itertools
import os
import random
import re
import shlex
import string
import sys
import warnings
from collections import OrderedDict
from fnmatch import fnmatchcase
from subprocess import list2cmdline
import pkg_resources
import pluggy
import py
import tom... | |
#!/usr/bin/env python3
# -*- coding: utf-8 -*-
#
# Copyright (C) 2017-2020 The Project X-Ray Authors.
#
# Use of this source code is governed by a ISC-style
# license that can be found in the LICENSE file or at
# https://opensource.org/licenses/ISC
#
# SPDX-License-Identifier: ISC
'''
This script allows to load a numb... | |
import json
import logging
import os
from threading import RLock
from uuid import uuid4
from azure.common.client_factory import get_client_from_cli_profile
from msrestazure.azure_active_directory import MSIAuthentication
from azure.mgmt.compute import ComputeManagementClient
from azure.mgmt.network import NetworkManag... | |
# Copyright (C) 2014 MediaMath, Inc. <http://www.mediamath.com>
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by appli... | |
# Copyright 2013 IBM Corp.
# Copyright 2013 Red Hat, Inc.
#
# Licensed under the Apache License, Version 2.0 (the "License"); you may
# not use this file except in compliance with the License. You may obtain
# a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless r... | |
# -*- coding: UTF-8 -*-
# Copyright 2016-2018 Rumma & Ko Ltd
# License: BSD (see file COPYING for details)
'''
Causes one or several :xfile:`help_texts.py` files to be generated
after each complete build of the doctree.
See :doc:`/dev/help_texts` for a topic overview.
Usage
=====
In your :xfile:`conf.py` file, add
... | |
########
# Copyright (c) 2014 GigaSpaces Technologies Ltd. All rights reserved
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless... | |
# Copyright (c) 2017 The Regents of the University of Michigan
# All rights reserved.
# This software is licensed under the BSD 3-Clause License.
from collections import defaultdict
import warnings
import logging
from .json import json
from ..common import six
if six.PY2:
from collections import Mapping
else:
... | |
import urllib, ssl
from socket import timeout
####################################################################################################
PREFIX = "/video/letmestream"
NAME = "LetMeStream"
ICON = 'icon_default.png'
###########################################################################################... | |
r"""Routines to create data from external modellers, for comparison purposes.
- DIPOLE1D: You must have Dipole1D installed and it must be in your system
path; https://software.seg.org/2012/0003.
- EMmod: You must have Dipole1D installed and it must be in your system
path; https://software.seg.org/2015/0001.
- Gr... | |
# Contributors:
# Christopher P. Barnes <senrabc@gmail.com>
# Andrei Sura: github.com/indera
# Mohan Das Katragadda <mohan.das142@gmail.com>
# Philip Chase <philipbchase@gmail.com>
# Ruchi Vivek Desai <ruchivdesai@gmail.com>
# Taeber Rapczak <taeber@ufl.edu>
# Nicholas Rejack <nrejack@ufl.edu>
# Josh Hanna <josh@hanna.... | |
#!/usr/bin/env python
# -*- mode: python; encoding: utf-8 -*-
"""Test client vfs."""
import functools
import os
from grr.client import vfs
from grr.client.client_actions import searching
from grr.lib import flags
from grr.lib import test_lib
from grr.lib import utils
from grr.lib.rdfvalues import client as rdf_clie... | |
from io import BytesIO
from azure.common import AzureHttpError
from azure.storage.blob import (
Blob,
BlockBlobService,
PageBlobService,
AppendBlobService,
CustomerProvidedEncryptionKey,
BlobBlock,
BlobPermissions,
ContentSettings)
from tests.testcase import (
StorageTestCase,
r... | |
# Copyright 2021 Pants project contributors (see CONTRIBUTORS.md).
# Licensed under the Apache License, Version 2.0 (see LICENSE).
from __future__ import absolute_import, division
import itertools
import os
from collections import OrderedDict, defaultdict, deque
from pex.common import pluralize
from pex.compatibilit... | |
"""Module for testing string variables."""
class TestStringVar(BaseTestCase):
def setUp(self):
BaseTestCase.setUp(self)
self.rawData = []
self.dataByKey = {}
for i in range(1, 11):
stringCol = "String %d" % i
fixedCharCol = ("Fixed Char %d" % i).ljust(40)
... | |
"""The following methods may be used to calculate the crosscorrelation and
autocorrelation for a time series.
These methods are 'special' in the sense that they are able to deal with
irregular time steps often observed in hydrological time series.
"""
from numpy import (append, arange, array, average, corrcoef, diff,... | |
#!/usr/bin/env python
# -*- coding: utf-8 -*-
##############################################################################
# Copyright Kitware Inc.
#
# Licensed under the Apache License, Version 2.0 ( the "License" );
# you may not use this file except in compliance with the License.
# You may obtain a copy of t... | |
#!/usr/bin/env python
# Copyright (c) 2012 The Chromium Authors. All rights reserved.
# Use of this source code is governed by a BSD-style license that can be
# found in the LICENSE file.
import os
from urlparse import urlparse
import pyauto_functional # Must be imported before pyauto
import pyauto
import test_utils... | |
import json
import urllib2
from directories import userCachePath, getDataDir
import os
import time
import base64 # @UnusedImport
from pymclevel.mclevelbase import PlayerNotFound
import urllib
from PIL import Image
from urllib2 import HTTPError
import atexit
import threading
import traceback
import logging
logger = lo... | |
import pytest
import os
from flex.exceptions import ValidationError
from flex.loading.schema.paths.path_item.operation.parameters import (
parameters_validator,
)
from flex.validation.parameter import (
validate_parameters,
)
from flex.constants import (
PATH,
STRING,
NUMBER,
BOOLEAN,
FLEX_... | |
#!/usr/bin/python3
import unittest
from pymamba import Database, Table, _debug, xIndexMissing, xWriteFail, xTableMissing, size_mb, size_gb
from subprocess import call
class UnitTests(unittest.TestCase):
_db_name = 'databases/unit-db'
_tb_name = 'demo1'
_debug = True
_data = [
{'name': 'Garet... | |
# ===============================================================================
# Copyright 2011 Jake Ross
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licens... | |
# -*- coding: utf-8 -*-
"""The SleuthKit (TSK) file system implementation."""
import pytsk3
from dfvfs.lib import definitions
from dfvfs.lib import errors
from dfvfs.lib import tsk_image
from dfvfs.path import tsk_path_spec
from dfvfs.resolver import resolver
from dfvfs.vfs import file_system
from dfvfs.vfs import ts... | |
#!/usr/bin/env python
# encoding: utf-8
r"""
Data Module
Contains the general class definition and the subclasses of the Clawpack data
objects.
:Authors:
Kyle T. Mandli and Randall J. LeVeque (2008-08-07) Initial version
Randall J. LeVeque (2008-08-07) Plotting data objects
Alan McIntyre (2009-01-01) Sp... | |
# coding=utf-8
# Copyright 2014 Pants project contributors (see CONTRIBUTORS.md).
# Licensed under the Apache License, Version 2.0 (see LICENSE).
from __future__ import (nested_scopes, generators, division, absolute_import, with_statement,
print_function, unicode_literals)
from argparse import... | |
"""This module contains all Cupy specific kernel_tuner functions"""
from __future__ import print_function
import logging
import time
import numpy as np
from kernel_tuner.observers import BenchmarkObserver
#embedded in try block to be able to generate documentation
#and run tests without cupy installed
try:
impo... | |
import logging
from connexion import NoContent
from flask import request
from geoalchemy2 import WKTElement
import osmapi
import traceback
import api.models
from sqlalchemy import func
import datetime
from sqlalchemy import tuple_
from sqlalchemy.exc import SQLAlchemyError
logging.basicConfig(level=logging.INFO)
logg... | |
from gameplay.game import Game
class Checkers(Game):
player_mapping = {
1: 'r',
2: 'w',
}
def __init__(self, board=None, current_player=1):
self.board = board or self.initial_board()
self.current_player = current_player
self.moves_without_capture = 0
@sta... | |
# django imports
from django.conf import settings
from django.contrib.auth.decorators import permission_required
from django.core.urlresolvers import reverse
from django.forms import ModelForm
from django.http import HttpResponse
from django.shortcuts import render_to_response
from django.template import RequestContext... | |
'''
Copyright (c) 2016, Battelle Memorial Institute
All rights reserved.
Redistribution and use in source and binary forms, with or without
modification, are permitted provided that the following conditions are met:
1. Redistributions of source code must retain the above copyright notice, this
list of conditions a... | |
# -*- coding: utf-8 -*-
"""
Evaluation functions
"""
import logging
import numpy as np
from sklearn.cluster import AgglomerativeClustering, KMeans
from .datasets.similarity import fetch_MEN, fetch_WS353, fetch_SimLex999, fetch_MTurk, fetch_RG65, fetch_RW, fetch_TR9856
from .datasets.categorization import fetch_AP, fet... | |
from distutils.command.config import config
import numpy
import copy
from PyQt5 import QtCore
from PyQt5 import QtGui
from PyQt5 import QtWidgets
from bumps import options
from bumps import fitters
import sas.qtgui.Utilities.LocalConfig as LocalConfig
import sas.qtgui.Utilities.ObjectLibrary as ObjectLibrary
import... | |
#!/usr/bin/env python
# Copyright 2017 the V8 project authors. All rights reserved.
# Use of this source code is governed by a BSD-style license that can be
# found in the LICENSE file.
"""
Global system tests for V8 test runners and fuzzers.
This hooks up the framework under tools/testrunner testing high-level scena... | |
import os
import pytest
import pandas as pd
import pandas.util.testing as tm
import ibis
import ibis.expr.datatypes as dt
pytest.importorskip('google.cloud.bigquery')
pytestmark = pytest.mark.bigquery
from ibis.bigquery.api import udf # noqa: E402
PROJECT_ID = os.environ.get('GOOGLE_BIGQUERY_PROJECT_ID', 'ibis-... | |
# Licensed under a 3-clause BSD style license - see LICENSE.rst
from __future__ import print_function, division, absolute_import
import numpy as np
from matplotlib.text import Text
from .frame import RectangularFrame
def sort_using(X, Y):
return [x for (y, x) in sorted(zip(Y, X))]
class TickLabels(Text):
... | |
from urllib import quote
from datetime import datetime
from django.test import Client
from questionnaire.forms.sections import SectionForm, SubSectionForm
from questionnaire.models import Questionnaire, Section, SubSection, Question, QuestionGroup, QuestionOption, \
MultiChoiceAnswer, NumericalAnswer, QuestionGro... | |
# Copyright 2017 Dravetech AB. All rights reserved.
#
# The contents of this file are licensed under the Apache License, Version 2.0
# (the "License"); you may not use this file except in compliance with the
# License. You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless req... | |
#!/usr/bin/env python
# Copyright (c) 2014 The Chromium Authors. All rights reserved.
# Use of this source code is governed by a BSD-style license that can be
# found in the LICENSE file.
import os
import ntpath
import posixpath
import sys
import collections
import unittest
SCRIPT_DIR = os.path.dirname(os.path.abspat... | |
# -*- coding: utf-8 -*-
"""
werkzeug._internal
~~~~~~~~~~~~~~~~~~
This module provides internally used helpers and constants.
:copyright: (c) 2013 by the Werkzeug Team, see AUTHORS for more details.
:license: BSD, see LICENSE for more details.
"""
import re
import string
import inspect
from weakre... | |
#!/usr/bin/env python
# Copyright 2020 The Chromium Authors. All rights reserved.
# Use of this source code is governed by a BSD-style license that can be
# found in the LICENSE file.
"""Tests for mb_validate.py."""
from __future__ import print_function
from __future__ import absolute_import
import sys
import ast
imp... | |
#!/usr/bin/env python
#
# Copyright (c) 2001 - 2016 The SCons Foundation
#
# Permission is hereby granted, free of charge, to any person obtaining
# a copy of this software and associated documentation files (the
# "Software"), to deal in the Software without restriction, including
# without limitation the rights to us... | |
# Licensed to the Apache Software Foundation (ASF) under one
# or more contributor license agreements. See the NOTICE file
# distributed with this work for additional information
# regarding copyright ownership. The ASF licenses this file
# to you under the Apache License, Version 2.0 (the
# "License"); you may not u... | |
import socket
from os import mkdir
from os.path import join, exists
from sys import platform
from asyncio import sleep
from math import sqrt
from uuid import uuid4
from enum import Enum
from csv import DictReader
from cyrandom import choice, shuffle, uniform
from time import time
from pickle import dump as pickle_dump... | |
# Copyright 2015 The TensorFlow Authors. All Rights Reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applica... | |
import warnings
import numpy as np
from numpy.testing import assert_array_almost_equal as assert_close
from numpy.testing import (assert_array_equal, assert_raises,
assert_almost_equal)
import skimage
from skimage import data
from skimage import exposure
from skimage.exposure.exposure impor... | |
#!/usr/bin/env python
# encoding: utf-8
"""
The IPython engine application
Authors:
* Brian Granger
* MinRK
"""
#-----------------------------------------------------------------------------
# Copyright (C) 2008-2011 The IPython Development Team
#
# Distributed under the terms of the BSD License. The full licen... | |
# Copyright (C) 2013 eNovance SAS <licensing@enovance.com>
#
# Author: Sylvain Afchain <sylvain.afchain@enovance.com>
#
# Licensed under the Apache License, Version 2.0 (the "License"); you may
# not use this file except in compliance with the License. You may obtain
# a copy of the License at
#
# http://www.apach... | |
import sys
import random
import signal
#Timer handler, helper function
class TimedOutExc(Exception):
pass
def handler(signum, frame):
#print 'Signal handler called with signal', signum
raise TimedOutExc()
class Manual_player:
def __init__(self):
pass
def move(self, temp_board, temp_block, old_m... | |
"""
Licensed to the Apache Software Foundation (ASF) under one
or more contributor license agreements. See the NOTICE file
distributed with this work for additional information
regarding copyright ownership. The ASF licenses this file
to you under the Apache License, Version 2.0 (the
"License"); you may not use this ... | |
"""
@author: Fyzel@users.noreply.github.com
@copyright: 2017 Englesh.org. All rights reserved.
@license: https://github.com/Fyzel/weather-data-flaskapi/blob/master/LICENSE
@contact: Fyzel@users.noreply.github.com
@deffield updated: 2017-06-14
"""
from flask_restplus import fields
from api.restplus im... | |
# encoding: utf-8
"""
Axis-related chart objects.
"""
from __future__ import absolute_import, print_function, unicode_literals
from ..enum.chart import XL_TICK_LABEL_POSITION, XL_TICK_MARK
from ..oxml.ns import qn
from ..text.text import Font
from ..util import lazyproperty
class _BaseAxis(object):
"""
Bas... | |
# Copyright 2012 Nebula, Inc.
#
# Licensed under the Apache License, Version 2.0 (the "License"); you may
# not use this file except in compliance with the License. You may obtain
# a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agree... | |
import unittest
import os
from textwrap import dedent
import numpy as np
from bltest import attr
from baiji import s3
from bltest import skip_if_unavailable, skip_on_import_error
from bltest.extra_asserts import ExtraAssertionsMixin
from unittest import mock
from lace.mesh import Mesh
from lace.serialization import obj... | |
#!/usr/bin/env python
'''
Licensed to the Apache Software Foundation (ASF) under one
or more contributor license agreements. See the NOTICE file
distributed with this work for additional information
regarding copyright ownership. The ASF licenses this file
to you under the Apache License, Version 2.0 (the
"License")... | |
import math
import numpy as np
from keras.layers import Input, LSTM, Dense
from keras.models import Model
from keras import backend as K
from keras.callbacks import EarlyStopping
from keras import losses
from keras.optimizers import Adam
import tensorflow as tf
class RNN():
def __init__(self, z_dim, action_dim,... | |
# vim: tabstop=4 shiftwidth=4 softtabstop=4
# Copyright 2013 OpenStack Foundation.
# All Rights Reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License"); you may
# not use this file except in compliance with the License. You may obtain
# a copy of the License at
#
# http://www.apac... | |
"""
Test the challenger by sending requests to it via a TiddlyWeb instance.
The LDAP interface is mocked as setting up a real one in a test
environment is too much effort.
"""
import httplib2
import ldap
from mock import Mock
from test.fixtures import initialize_app
def setup_module():
initialize_app()
def t... | |
#!/usr/bin/env python3
PKG = 'lg_earth'
NAME = 'test_kmlsync'
KMLSYNC_HOST = '127.0.0.1'
KMLSYNC_PORT = 8765
KML_ENDPOINT = 'http://' + KMLSYNC_HOST + ':' + str(KMLSYNC_PORT)
WINDOW_SLUG = 'center'
import sys
import re
import time
import json
import rospy
import rostest
import unittest
import requests
import xml.etr... | |
from __future__ import absolute_import, print_function
import itertools
from collections import defaultdict
from datetime import timedelta
import six
from django.conf import settings
from django.db.models import Min, Q
from django.utils import timezone
from sentry import tagstore, tsdb
from sentry.app import env
fro... | |
# Licensed under a 3-clause BSD style license - see LICENSE.rst
"""
Tests for the mask module.
"""
import astropy.units as u
import numpy as np
from numpy.testing import assert_allclose, assert_almost_equal
import pytest
from ..bounding_box import BoundingBox
from ..circle import CircularAperture, CircularAnnulus
fro... | |
# engine/url.py
# Copyright (C) 2005-2012 the SQLAlchemy authors and contributors <see AUTHORS file>
#
# This module is part of SQLAlchemy and is released under
# the MIT License: http://www.opensource.org/licenses/mit-license.php
"""Provides the :class:`~sqlalchemy.engine.url.URL` class which encapsulates
information... | |
import itertools as itt
import numpy as np
import pytest
import mbuild as mb
from mbuild.coordinate_transform import (
AxisTransform,
ChangeOfBasis,
CoordinateTransform,
RigidTransform,
Rotation,
RotationAroundX,
RotationAroundY,
RotationAroundZ,
Translation,
_spin,
angle,
... | |
import numpy as np
import cv2
import time
import os
import psutil
import gc
from grid_game import GridGame
from util.mem_convert import bytes2human
class Environment:
"""docstring for Environment"""
BUFFER_LEN = 1
EPISODE_STEPS = 18000
EPOCH_COUNT = 10
EPOCH_STEPS = 10000
EVAL_EPS = 0.001
FRAMES_SKIP = 1
FRAM... | |
import random
import json
import datetime
import signal
ENFORCED_TIME = 5
hrst_table = json.load(open('yay.json'))
class EnforcedTimeExecption(Exception):
pass
def EnforcedTimeHandler(signum, frame):
raise EnforcedTimeExecption()
class Player(object):
'''
Player Class Container.
'''
... | |
# Copyright 2010 United States Government as represented by the
# All Rights Reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License"); you may
# not use this file except in compliance with the License. You may obtain
# a copy of the License at
#
# http://www.apache.org/licenses/LICE... | |
# -*- coding: utf-8 -*-
from __future__ import absolute_import
import logging
import threading
import os
import sys
import traceback
try:
from multiprocessing import current_process
from multiprocessing import util as mputil
except ImportError:
current_process = mputil = None # noqa
from . import curren... | |
import fnmatch
import glob
import os
import re
import sys
from itertools import dropwhile
from optparse import make_option
from subprocess import PIPE, Popen
import django
from django.core.management.base import CommandError, NoArgsCommand
from django.utils.text import get_text_list
from django.utils.jslex import prep... | |
#!/usr/bin/env python
"""
Read protein match output produced by alignment-panel-civ.py and group it by
pathogen (either virus or bacteria).
This is currently only useful when you are matching against a subject protein
database whose titles have a pathogen accession number in the 5th |-separated
field, like this:
civ... | |
import warnings
import pytest
import numpy as np
from numpy.lib.nanfunctions import _nan_mask, _replace_nan
from numpy.testing import (
assert_, assert_equal, assert_almost_equal, assert_no_warnings,
assert_raises, assert_array_equal, suppress_warnings
)
# Test data
_ndat = np.array([[0.6244, np.nan, 0.2... | |
from copy import copy
from datetime import datetime, timedelta
import json
from django.contrib.contenttypes import generic
from django.contrib.contenttypes.models import ContentType
from django.db import models
from django.utils.module_loading import import_by_path
from enum import Enum
from jsonfield import JSONField... | |
# Copyright (c) 2015 Mirantis, Inc.
#
# Licensed under the Apache License, Version 2.0 (the "License"); you may
# not use this file except in compliance with the License. You may obtain
# a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law... | |
#! /usr/bin/env python
"""
Python API for KB SRU
"""
import sys
import urllib
import requests
from lxml import etree
SRU_BASEURL = 'http://jsru.kb.nl/sru/sru'
SRU_BASEURL += '?version=1.2&maximumRecords=%i'
SRU_BASEURL += '&operation=searchRetrieve'
SRU_BASEURL += '&startRecord=%i'
SRU_BASEURL += '&recordSchema=%s'
S... | |
import calendar
import datetime
import re
import sys
import urllib
import urlparse
from email.utils import formatdate
from django.utils.datastructures import MultiValueDict
from django.utils.encoding import smart_str, force_unicode
from django.utils.functional import allow_lazy
ETAG_MATCH = re.compile(r'(?:W/)?"((?:\... | |
# coding=utf-8
# --------------------------------------------------------------------------
# Copyright (c) Microsoft Corporation. All rights reserved.
# Licensed under the MIT License. See License.txt in the project root for license information.
# Code generated by Microsoft (R) AutoRest Code Generator.
# Changes may ... | |
import mock
import functools
from modularodm import Q
from nose.tools import * # flake8: noqa
from api.base.settings.defaults import API_BASE
from api_tests import utils as test_utils
from framework.auth.core import Auth
from osf_tests.factories import PreprintFactory, AuthUserFactory, ProjectFactory, SubjectFactory,... | |
# -*- coding: utf-8 -*-
'''
This module allows you to manage extended attributes on files or directories
.. code-block:: bash
salt '*' xattr.list /path/to/file
'''
from __future__ import absolute_import
# Import Python Libs
import logging
# Import salt libs
import salt.utils.mac_utils
from salt.exceptions impor... | |
import asyncio
from collections import deque, namedtuple
import itertools
import logging
import os
import threading
import weakref
import warnings
from tornado.concurrent import Future
from tornado.ioloop import IOLoop
from ..protocol import nested_deserialize
from ..utils import get_ip
from .registry import Backend... | |
# -*- coding: utf-8 -*-
#
# Copyright 2015-present MongoDB, Inc.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicab... | |
# -----------------------------------------------------------------------------
import datetime
import os
import glob
from PySide import QtCore, QtGui
from dpa.config import Config
from dpa.action.registry import ActionRegistry
from dpa.notify import Notification, emails_from_unames
from dpa.ptask.area import PTask... | |
# -*- coding: utf-8 -*-
"""
core
~~~~
Core functionality shared between the extension and the decorator.
:copyright: (c) 2022 by Ashley Sommer (based on flask-cors by Cory Dolphin).
:license: MIT, see LICENSE for more details.
"""
import re
import logging
import collections
from datetime import tim... | |
# This file is part of Indico.
# Copyright (C) 2002 - 2021 CERN
#
# Indico is free software; you can redistribute it and/or
# modify it under the terms of the MIT License; see the
# LICENSE file for more details.
from functools import partial
from unittest.mock import MagicMock
import pytest
from indico.core import ... | |
import os
from unittest import TestCase
from unittest.mock import Mock
import pandora.clientbuilder as cb
from pandora.client import APIClient
from pandora.transport import DEFAULT_API_HOST
class TestTranslatingDict(TestCase):
class TestDict(cb.TranslatingDict):
KEY_TRANSLATIONS = {"FOO": "BAR"}
... | |
# Copyright (C) 2007-2012 Michael Foord & the mock team
# E-mail: fuzzyman AT voidspace DOT org DOT uk
# http://www.voidspace.org.uk/python/mock/
from warnings import catch_warnings
import unittest2 as unittest
from mock.tests.support import is_instance
from mock import MagicMock, Mock, patch, sentinel, mock_open, c... | |
# helper.py
# Copyright (C) 2008, 2009 Michael Trier (mtrier@gmail.com) and contributors
#
# This module is part of GitPython and is released under
# the BSD License: http://www.opensource.org/licenses/bsd-license.php
from __future__ import print_function
import os
import sys
from unittest import TestCase
import time
i... | |
##########################################################################
#
# Copyright (c) 2013-2014, Image Engine Design Inc. All rights reserved.
#
# Redistribution and use in source and binary forms, with or without
# modification, are permitted provided that the following conditions are
# met:
#
# * Redi... | |
import difflib
_file_template = """
<div id="diff_table_div">
%(summary)s
%(table)s
</div>
"""
_table_template = """
<table class="diff" id="difflib_chg_%(prefix)s_top"
cellspacing="0" cellpadding="0" rules="groups">
<colgroup></colgroup> <colgroup></colgroup> <colgroup></colgroup>
<col... |
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