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tristan-deep commited on
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1 Parent(s): b5b5b9a

Leave ulmshare and twente-cavitation to their sync PRs

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Both cards also change in separate sync PRs that carry the Open-H-RF rename for these folders. Keeping them out of this PR avoids a merge conflict between the two.

twente-cavitation/README.md CHANGED
@@ -7,7 +7,7 @@ task_categories:
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  tags:
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  - ultrasound
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  - rf
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- - open-h-rf
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  - cavitation
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  language:
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  - en
@@ -43,7 +43,7 @@ The dataset contains data over a large pressure range, from very low pressures u
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  ## Processing the Dataset
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- The acquisitions can be processed with the `reconstruct.py` [script](https://github.com/open-h/Open-H-RF/blob/main/datasets/twente-cavitation/reconstruct.py) as provided in the [Open-H-RF GitHub repository](https://github.com/open-h/Open-H-RF), together with the `pipeline.yaml` definition in this folder and the [zea library](https://github.com/tue-bmd/zea). The script streams the data from the Hugging Face Hub.
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  Set `ZEA_FILE` at the top of the script to pick an acquisition and `N_FRAMES` to set how many frames are averaged; the map is written to `assets/<file>.png`.
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@@ -55,7 +55,7 @@ Set `ZEA_FILE` at the top of the script to pick an acquisition and `N_FRAMES` to
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  ## Dataset Quantification
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- **Current Open-H-RF release:** 19 HDF5 files; 10.85 GB (10,850,533,376 bytes) stored; root `zea_version` **0.1.6**. Sizes include all HDF5 contents and use decimal units (MB = 10^6 bytes, GB = 10^9 bytes, TB = 10^12 bytes), not decoded-array memory or original-source download sizes.
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  - 19 aquisitions of 400 frames each, totalling 7600 frames
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  - No train/validation/test split is defined; all acquisitions are provided in full.
 
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  tags:
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  - ultrasound
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  - rf
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+ - openh-rf
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  - cavitation
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  language:
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  - en
 
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  ## Processing the Dataset
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+ The acquisitions can be processed with the `reconstruct.py` [script](https://github.com/open-h/OpenH-RF/blob/main/datasets/twente-cavitation/reconstruct.py) as provided in the [OpenH-RF GitHub repository](https://github.com/open-h/OpenH-RF), together with the `pipeline.yaml` definition in this folder and the [zea library](https://github.com/tue-bmd/zea). The script streams the data from the Hugging Face Hub.
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  Set `ZEA_FILE` at the top of the script to pick an acquisition and `N_FRAMES` to set how many frames are averaged; the map is written to `assets/<file>.png`.
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  ## Dataset Quantification
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+ **Current OpenH-RF release:** 19 HDF5 files; 10.85 GB (10,850,533,376 bytes) stored; root `zea_version` **0.1.6**. Sizes include all HDF5 contents and use decimal units (MB = 10^6 bytes, GB = 10^9 bytes, TB = 10^12 bytes), not decoded-array memory or original-source download sizes.
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  - 19 aquisitions of 400 frames each, totalling 7600 frames
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  - No train/validation/test split is defined; all acquisitions are provided in full.
ulmshare/README.md CHANGED
@@ -7,7 +7,7 @@ task_categories:
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  tags:
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  - ultrasound
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  - iq
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- - open-h-rf
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  - ulm
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  - super-resolution
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  - microbubbles
@@ -24,7 +24,7 @@ size_categories:
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  <p align="center">
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  <img width="500"
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- src="https://huggingface.co/datasets/nvidia/Open-H-RF/resolve/main/ulmshare/assets/hero.gif"
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  alt="Ultrasound localization microscopy of the mouse brain." />
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  <em style="color: #888;">
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  ULM super-resolution reconstruction of a mouse brain.
@@ -79,7 +79,7 @@ Ultrasound localization microscopy: microbubble detection and localization, fram
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  ## Processing the Dataset
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- The acquisitions can be processed with the `reconstruct.py` [script](https://github.com/open-h/Open-H-RF/blob/main/datasets/ulmshare/reconstruct.py) as provided in the [Open-H-RF GitHub repository](https://github.com/open-h/Open-H-RF), together with the `pipeline_bmode.yaml` and `pipeline_tissue_suppression.yaml` definitions in this folder and the [zea library](https://github.com/tue-bmd/zea). The script streams the data from the Hugging Face Hub and writes a B-mode, a power-Doppler image and movie, and a ULM density map (the ULM steps live in [`ulm.py`](https://github.com/open-h/Open-H-RF/blob/main/datasets/ulmshare/ulm.py)).
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  ## Dataset Format
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@@ -137,7 +137,7 @@ Acquisition context with no zea spec field, stored as strings exactly as recorde
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  ## Dataset Quantification
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- **Current Open-H-RF release:** 103 HDF5 files; 20.74 TB (20,735,658,275,478 bytes) stored; root `zea_version` **0.1.4**. Sizes include all HDF5 contents and use decimal units (MB = 10^6 bytes, GB = 10^9 bytes, TB = 10^12 bytes), not decoded-array memory or original-source download sizes.
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  - **Acquisitions:** 99, from 61 mice — one zea HDF5 file per acquisition.
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  - **Stored HDF5 size:** 20.74 TB (20,735,658,275,478 bytes).
 
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  tags:
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  - ultrasound
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  - iq
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+ - openh-rf
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  - ulm
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  - super-resolution
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  - microbubbles
 
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  <p align="center">
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  <img width="500"
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+ src="https://huggingface.co/datasets/nvidia/OpenH-RF/resolve/main/ulmshare/assets/hero.gif"
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  alt="Ultrasound localization microscopy of the mouse brain." />
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  <em style="color: #888;">
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  ULM super-resolution reconstruction of a mouse brain.
 
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  ## Processing the Dataset
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+ The acquisitions can be processed with the `reconstruct.py` [script](https://github.com/open-h/OpenH-RF/blob/main/datasets/ulmshare/reconstruct.py) as provided in the [OpenH-RF GitHub repository](https://github.com/open-h/OpenH-RF), together with the `pipeline_bmode.yaml` and `pipeline_tissue_suppression.yaml` definitions in this folder and the [zea library](https://github.com/tue-bmd/zea). The script streams the data from the Hugging Face Hub and writes a B-mode, a power-Doppler image and movie, and a ULM density map (the ULM steps live in [`ulm.py`](https://github.com/open-h/OpenH-RF/blob/main/datasets/ulmshare/ulm.py)).
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  ## Dataset Format
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  ## Dataset Quantification
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+ **Current OpenH-RF release:** 103 HDF5 files; 20.74 TB (20,735,658,275,478 bytes) stored; root `zea_version` **0.1.4**. Sizes include all HDF5 contents and use decimal units (MB = 10^6 bytes, GB = 10^9 bytes, TB = 10^12 bytes), not decoded-array memory or original-source download sizes.
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  - **Acquisitions:** 99, from 61 mice — one zea HDF5 file per acquisition.
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  - **Stored HDF5 size:** 20.74 TB (20,735,658,275,478 bytes).