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  1. .gitattributes +35 -0
  2. stanford-murine/data/SoSExperiments/august13_2020/L12_3v/chicken/phantom5/DATA_Tracks_20200813_102403.hdf5 +3 -0
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  37. stanford-murine/pipeline_hadamard.yaml +26 -0
  38. stanford-murine/pipeline_multifocal.yaml +26 -0
  39. stanford-murine/pipeline_synthetic_aperture.yaml +27 -0
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+ pipeline:
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+ name: pipeline
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+ # Overlap averaging creates fractional RF, and Hadamard decoding can exceed int16.
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+ - demodulate
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+ - name: fir_filter
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+ params:
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+ axis: -3
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+ complex_channels: true
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+ num_patches: 1000
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+ - envelope_detect
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+ - name: normalize
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+ - 0.0
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+ - 1.0
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+ - log_compress
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+ pixels_per_wavelength: 3
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+ - demodulate
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+ pixels_per_wavelength: 3
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