Moves the whole dataset folder (15 HDF5 files, server-side copy, unchanged) to waterloo-femoralvein/ and removes waterloo-largeartery/. Card, pipeline.yaml and figures mirror tristan-deep/OpenH-RF#30 and #39.
22 days ago
waterloo-largeartery: restructure the data card to the common layout
Syncs the waterloo-largeartery (UW-FemVein RF) card, pipeline and figures on the Hub with the reviewed state on GitHub (open-h/OpenH-RF).
The frame counts were wrong. The card said 24,000 frames per acquisition and a 360,000-frame total; the release is 15 acquisitions of 12,000 frames, which is 180,000 frames.
`pipeline.yaml` gains the explicit grid the reference reconstruction uses, so zea no longer falls back to an aperture-wide, full-depth default.
Adds the two figures the card shows: `assets/Acq5.gif`, the cine loop the card now leads with, and `assets/reconstruct_output.png`, the reference reconstruction, which was linked at the folder root and so was broken here. The card also gains the `zea process` one-liner that renders `Acq5.hdf5` straight from the Hub.
One link is dropped: `convert.py` is not published in either repository, so the LITMUS pipeline paragraph no longer links it.
Files changed: 4.
```
+ waterloo-largeartery/assets/Acq5.gif
+ waterloo-largeartery/assets/rec…
- Tidy the pipeline YAMLs (7e726adfd8bd3e8ab397e8a4fb284fe20605c151)
- Ship the two configs the reconstruct scripts need (d330799806f927124f06b01ed0617f690271799c)
- Normalize line endings to LF (cce1ebbf5636b564fb362764eec038afbc1cd7d9)
- Remove the Python helpers from twente-microbubblesim (0fde458d1f28fe3ff3d6ba1ceac2a6cf0ee16411)
- Remove the last reconstruction script (5d49e4f4dc1eccd3cf2986a45e9cb493eb6ee017)
- add cross link to github (0715e04468208c71223097ca6ac292594882f6ce)
- Drop the comment from .gitattributes (33fd6aacd7e112ea169d1ca953c475e81362ca5a)
- Point data cards at pipeline.yaml and the merged reconstruct scripts (2de063e00e78dfe4f0acd302fa4ded18740f5a56)
- Lead the tue-carotid card with a rendered bifurcation loop (1df230e2f455ed02a31177b9e80eebba53424a29)
- Match the wpi card's code block to the formatter (cbe25eb94fa1b9405d40574ff354c8194b38b095)
Co-authored-by: Tristan Stevens <tristan-deep@users.noreply.huggingface.co>
29 days ago
Simplify root README and standardize institution credits (#4)
