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nv-raw2insights-us: sync pipeline.yaml, data card and assets with GitHub (#19)
Browse files- nv-raw2insights-us: add pipeline.yaml (DAS reconstruction recipe) (48a8fef7cfe4f8fe8ad1d3b9d6e70eda83bf0000)
- nv-raw2insights-us: sync data card and assets with GitHub (47b38d666d5e5e86bec7be03049c662f55f94061)
- nv-raw2insights-us: match pipeline.yaml to GitHub, add the reconstruction figure (d66c6ad93fc15cb79b9aa6472830761d2917992c)
- nv-raw2insights-us: restore the pipeline.yaml header comment (05afe65faf525365fc112e1486183adaad3fe3c3)
Co-authored-by: Tristan Stevens <tristan-deep@users.noreply.huggingface.co>
nv-raw2insights-us/README.md
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# NV-Raw2Insights-US — Simulated FSA Channel Data with Sound-Speed, Aberration, and Segmentation Ground Truth
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## Dataset Description
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NV-Raw2Insights-US is a **simulated full-synthetic-aperture (FSA)** ultrasound
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# NV-Raw2Insights-US — Simulated FSA Channel Data with Sound-Speed, Aberration, and Segmentation Ground Truth
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*DBUA results using synthetic validation sample 0084 from NV-Raw2Insights-US: B-mode (left) and estimated sound speed (right). Bulk-speed calibration is followed by 400 spatial-refinement iterations, with fixed display scales. These are DBUA reconstructions, not predictions from an NV-Raw2Insights-US model.*
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<!-- assets/main.png is the unlabelled final B-mode panel from this run, for the dataset collage. -->
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## Dataset Description
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NV-Raw2Insights-US is a **simulated full-synthetic-aperture (FSA)** ultrasound
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nv-raw2insights-us/assets/dbua-reconstruction.gif
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nv-raw2insights-us/assets/main.png
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nv-raw2insights-us/assets/main_uncorrect.png
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nv-raw2insights-us/assets/nv_raw2insights_us_reconstructed.png
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nv-raw2insights-us/pipeline.yaml
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# Reconstruction pipeline recipe for the NV-Raw2Insights-US example.
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#
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# This file is written by reconstruct.py (pipeline.to_yaml) as a shareable
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# artifact; the pipeline is defined in code, then saved here and loaded back
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# in, so this file is provably what reconstruct.py actually runs. It records
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# the DAS -> envelope -> normalize -> log-compress operation chain; the
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# acquisition/grid parameters are derived from the data file at run time, not
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# stored here.
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#
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# This is the plain DAS recipe, without sound-speed (aberration) correction.
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# reconstruct.py's SoS-corrected panel runs this same pipeline a second time,
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# passing sos_map/sos_grid_x/sos_grid_z to the "beamform" op at call time.
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pipeline:
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operations:
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- name: beamform
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- envelope_detect
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- name: normalize
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params:
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output_range:
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- 0.0
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- 1.0
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- log_compress
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