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tristan-deep commited on
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tue-aaa: sync data card, pipeline grid and figures with GitHub

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Syncs the tue-aaa card, pipeline and figures on the Hub with the reviewed state on GitHub (open-h/OpenH-RF).

Two numbers on the card were wrong. Quantification said "500 acquisitions"; the release is 15 acquisitions (one HDF5 file each) of 500 frames, 7,500 frames in total. Subject metadata said "aged 63-90"; the cohort is 13 M / 2 F, aged 66-87.

`pipeline.yaml` raises the reconstruction grid from 580 x 600 to 960 x 832 over the same field of view, which is what produced the card's figures.

Adds the cine loop the card now leads with, `assets/AAA_subject11.gif` (42 MB), reconstructed from `data/AAA_subject11.hdf5`, together with the `zea process` one-liner that renders the acquisition straight from the Hub. `assets/main.png` is the release image and is not embedded in the card.

Files changed: 4.

```
+ tue-aaa/assets/AAA_subject11.gif
+ tue-aaa/assets/main.png
~ tue-aaa/README.md
~ tue-aaa/pipeline.yaml
```

tue-aaa/README.md CHANGED
@@ -17,6 +17,19 @@ language:
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  # Abdominal Aortic Aneurysm (AAA) curved-array channel data
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  ## Dataset Description
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  This dataset contains ultrasound channel data acquired in vivo from patients with abdominal aortic aneurysms (AAA). The dataset consists of ultrafast acquisitions obtained using a curved array ultrasound transducer operating in diverging wave transmission mode with a Verasonics system. The data capture raw radio frequency (RF) channel signals at high frame rates, enabling access to the full spatiotemporal information.
@@ -55,7 +68,7 @@ zea file format. Subject metadata is stored under `metadata/subject` (`age`, `se
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  **Current OpenH-RF release:** 15 HDF5 files; 53.08 GB (53,077,606,400 bytes) stored; root `zea_version` **0.1.4**. Sizes include all HDF5 contents and use decimal units (MB = 10^6 bytes, GB = 10^9 bytes, TB = 10^12 bytes), not decoded-array memory or original-source download sizes.
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- - **Samples / frames:** 500 acquisitions
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  - **Stored HDF5 size:** 53.08 GB (53,077,606,400 bytes).
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  | Field | Shape | dtype | Units | Description |
@@ -64,7 +77,7 @@ zea file format. Subject metadata is stored under `metadata/subject` (`age`, `se
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  ## Subject Metadata
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- Patients are dominantly male, aged 63–90, and scanned in the Netherlands.
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  ## Data Validation
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  # Abdominal Aortic Aneurysm (AAA) curved-array channel data
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+ ![Reconstructed cineloop from AAA_subject11.hdf5](assets/AAA_subject11.gif)
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+
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+ Cine loop of [`AAA_subject11.hdf5`](https://huggingface.co/datasets/nvidia/OpenH-RF/blob/main/tue-aaa/data/AAA_subject11.hdf5),
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+ reconstructed from the raw channel data. `zea` renders the whole acquisition straight
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+ from the Hub:
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+
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+ ```bash
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+ zea process \
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+ --dataset hf://nvidia/OpenH-RF/tue-aaa/data/AAA_subject11.hdf5 \
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+ --config hf://nvidia/OpenH-RF/tue-aaa/pipeline.yaml \
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+ ```
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+
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+
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  ## Dataset Description
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  This dataset contains ultrasound channel data acquired in vivo from patients with abdominal aortic aneurysms (AAA). The dataset consists of ultrafast acquisitions obtained using a curved array ultrasound transducer operating in diverging wave transmission mode with a Verasonics system. The data capture raw radio frequency (RF) channel signals at high frame rates, enabling access to the full spatiotemporal information.
 
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  **Current OpenH-RF release:** 15 HDF5 files; 53.08 GB (53,077,606,400 bytes) stored; root `zea_version` **0.1.4**. Sizes include all HDF5 contents and use decimal units (MB = 10^6 bytes, GB = 10^9 bytes, TB = 10^12 bytes), not decoded-array memory or original-source download sizes.
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+ - **Samples / frames:** 15 acquisitions (one HDF5 file each), 500 frames per acquisition — 7,500 frames total
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  - **Stored HDF5 size:** 53.08 GB (53,077,606,400 bytes).
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  | Field | Shape | dtype | Units | Description |
 
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  ## Subject Metadata
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+ Patients are dominantly male (13 M / 2 F), aged 66–87, and scanned in the Netherlands.
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  ## Data Validation
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tue-aaa/assets/AAA_subject11.gif ADDED

Git LFS Details

  • SHA256: 8fa15b7288c6e6ac8f10ec8e327a67a0939f85846ae83cbead91582ab32077d7
  • Pointer size: 133 Bytes
  • Size of remote file: 42.3 MB
tue-aaa/assets/main.png ADDED

Git LFS Details

  • SHA256: 85a83321dbcb37641e88a6dafc9432fc917be70c8466667828797f6000c81a66
  • Pointer size: 131 Bytes
  • Size of remote file: 276 kB
tue-aaa/pipeline.yaml CHANGED
@@ -17,8 +17,8 @@ pipeline:
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  - 1.0
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  - log_compress
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  parameters:
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- grid_size_x: 580
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- grid_size_z: 600
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  xlims:
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  - -0.1
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  - 0.1
 
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  - 1.0
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  - log_compress
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  parameters:
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+ grid_size_x: 960
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+ grid_size_z: 832
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  xlims:
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  - -0.1
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  - 0.1