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processing_code/processor.py ADDED
@@ -0,0 +1,668 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ import os
2
+ import logging
3
+ from pathlib import Path
4
+ from typing import Optional, Tuple
5
+
6
+ import cv2
7
+ import h5py
8
+ import numpy as np
9
+ import tyro
10
+ from rich.logging import RichHandler
11
+ from tqdm import tqdm
12
+
13
+ from utils.sync_timestamps import (
14
+ synchronize_timestamps_3way,
15
+ save_sync_csv,
16
+ _pick_latest_file,
17
+ _pick_latest_file_multi_ext,
18
+ SyncResult3Way,
19
+ )
20
+ from utils.extract_camera_data import extract_camera_data
21
+ from utils.extract_dji_data import extract_dji_rgb
22
+ from utils.extract_radar_data import process_single_frame
23
+ from utils.extract_max_data import extract_max30105_for_sequence
24
+ from utils.extract_pcd import extract_point_cloud_from_frame
25
+
26
+
27
+ def setup_logging(name):
28
+ logging.basicConfig(
29
+ level=logging.INFO,
30
+ format=f"%(name)-12s %(message)s",
31
+ datefmt="[%H:%M:%S]",
32
+ handlers=[RichHandler()]
33
+ )
34
+ return logging.getLogger(name)
35
+
36
+
37
+ def load_radar_frames(radar_h5_path: str, frame_indices: np.ndarray) -> np.ndarray:
38
+ """
39
+ Load selected radar frames from HDF5.
40
+
41
+ Returns:
42
+ - radar_frames: shape (N, doppler, tx, rx, range), dtype from file (typically int16)
43
+ """
44
+ with h5py.File(radar_h5_path, "r") as f:
45
+ if "radar_data" not in f:
46
+ raise ValueError(f"Dataset 'radar_data' not found in {radar_h5_path}")
47
+
48
+ num_frames_attr = f.attrs.get("num_frames")
49
+ if isinstance(num_frames_attr, (int, np.integer)):
50
+ num_frames_attr = int(num_frames_attr)
51
+ else:
52
+ num_frames_attr = f["radar_data"].shape[0]
53
+
54
+ # Load only the specified indices
55
+ frames = []
56
+ for idx in frame_indices:
57
+ if idx < 0 or idx >= num_frames_attr:
58
+ continue
59
+ frames.append(f["radar_data"][int(idx)])
60
+
61
+ if not frames:
62
+ return np.empty((0, 0, 0, 0, 0), dtype=np.int16)
63
+
64
+ return np.stack(frames, axis=0)
65
+
66
+
67
+ def _resize_rgb_to(
68
+ frames: np.ndarray,
69
+ target_size: Tuple[int, int],
70
+ interpolation: int = cv2.INTER_LINEAR,
71
+ log=None,
72
+ ) -> np.ndarray:
73
+ """
74
+ Resize RGB frames (N, H, W, 3) uint8 to (N, target_h, target_w, 3).
75
+
76
+ target_size: (width, height) for cv2 convention, e.g. (512, 288).
77
+ """
78
+ N, H, W, C = frames.shape
79
+ assert C == 3 and frames.dtype == np.uint8
80
+ w, h = target_size
81
+ if (W, H) == (w, h):
82
+ return frames
83
+ out = np.empty((N, h, w, 3), dtype=np.uint8)
84
+ if log:
85
+ log.info(f" Resizing RGB {frames.shape} -> (N, {h}, {w}, 3)...")
86
+ for i in range(N):
87
+ out[i] = cv2.resize(frames[i], (w, h), interpolation=interpolation)
88
+ return out
89
+
90
+
91
+ def save_processed_optimized(
92
+ output_dir: str,
93
+ radar_cube: Optional[np.ndarray] = None,
94
+ zed_rgb: Optional[np.ndarray] = None,
95
+ zed_depth_mm: Optional[np.ndarray] = None,
96
+ dji_rgb: Optional[np.ndarray] = None,
97
+ radar_timestamps: Optional[np.ndarray] = None,
98
+ zed_timestamps: Optional[np.ndarray] = None,
99
+ dji_timestamps: Optional[np.ndarray] = None,
100
+ sync_result=None,
101
+ metadata: dict = None,
102
+ rgb_codec: str = "mjpeg",
103
+ radar_filename: str = "radar.npy",
104
+ log=None,
105
+ ):
106
+ """
107
+ Save processed multimodal data using optimized formats for fast loading.
108
+
109
+ File structure:
110
+ - radar.npy: Radar data (complex64)
111
+ - dji_rgb.npy: DJI RGB (N, 504, 896, 3) uint8, resized from 1920x1080
112
+ - zed_rgb.npy: ZED RGB (N, 504, 896, 3) uint8, resized from original
113
+ - zed_depth.npy: ZED depth (uint16 millimeters)
114
+ - metadata.json: Shapes, dtypes, timestamps, sync indices, and other metadata
115
+
116
+ rgb_codec: Unused (kept for backward compatibility).
117
+
118
+ Args:
119
+ output_dir: Directory path to save files and metadata JSON
120
+ radar_cube: (N, doppler, elevation, azimuth, range) complex64
121
+ zed_rgb: (N, H, W, 3) uint8
122
+ zed_depth_mm: (N, H, W) float32
123
+ dji_rgb: (N, H, W, 3) uint8
124
+ radar_timestamps: (N,) float64 - milliseconds
125
+ zed_timestamps: (N,) float64 - milliseconds
126
+ dji_timestamps: (N,) float64 - milliseconds
127
+ sync_result: SyncResult or SyncResult3Way object
128
+ metadata: Optional dict of additional metadata
129
+ log: Logger instance
130
+ """
131
+ import json
132
+
133
+ if log:
134
+ log.info(f"Saving to optimized format in directory: {output_dir}")
135
+
136
+ # Prepare metadata dictionary
137
+ meta_dict = {}
138
+
139
+ # Save radar data as NPY
140
+ if radar_cube is not None:
141
+ radar_path = os.path.join(output_dir, radar_filename)
142
+ np.save(radar_path, radar_cube)
143
+
144
+ meta_dict['radar'] = {
145
+ 'shape': list(radar_cube.shape),
146
+ 'dtype': str(radar_cube.dtype),
147
+ 'shape_info': '(N, doppler, elevation, azimuth, range)',
148
+ 'num_frames': int(radar_cube.shape[0]),
149
+ 'file': radar_filename
150
+ }
151
+ if radar_timestamps is not None:
152
+ meta_dict['radar']['timestamps_ms'] = [float(t) for t in radar_timestamps]
153
+ if log:
154
+ log.info(f" Radar: {radar_cube.shape} {radar_cube.dtype} -> {radar_filename}")
155
+
156
+ # Save DJI RGB: resize 1920x1080 -> 896x504, then save as NPY for fast loading
157
+ if dji_rgb is not None:
158
+ dji_rgb_resized = _resize_rgb_to(dji_rgb, (896, 504), log=log)
159
+ dji_path = os.path.join(output_dir, "dji_rgb.npy")
160
+ np.save(dji_path, dji_rgb_resized)
161
+
162
+ meta_dict["dji_rgb"] = {
163
+ "shape": list(dji_rgb_resized.shape),
164
+ "dtype": str(dji_rgb_resized.dtype),
165
+ "num_frames": int(dji_rgb_resized.shape[0]),
166
+ "file": "dji_rgb.npy",
167
+ "resolution": [896, 504],
168
+ "original_resolution": [dji_rgb.shape[2], dji_rgb.shape[1]],
169
+ }
170
+ if dji_timestamps is not None:
171
+ meta_dict["dji_rgb"]["timestamps_ms"] = [float(t) for t in dji_timestamps]
172
+ if log:
173
+ log.info(
174
+ f" DJI RGB: {dji_rgb.shape} -> resized {dji_rgb_resized.shape} -> dji_rgb.npy"
175
+ )
176
+
177
+ # Save ZED RGB as NPY: resize to 896x504
178
+ if zed_rgb is not None:
179
+ zed_rgb_resized = _resize_rgb_to(zed_rgb, (896, 504), log=log)
180
+ zed_rgb_path = os.path.join(output_dir, "zed_rgb.npy")
181
+ np.save(zed_rgb_path, zed_rgb_resized)
182
+
183
+ meta_dict["zed_rgb"] = {
184
+ "shape": list(zed_rgb_resized.shape),
185
+ "dtype": str(zed_rgb_resized.dtype),
186
+ "num_frames": int(zed_rgb_resized.shape[0]),
187
+ "file": "zed_rgb.npy",
188
+ "resolution": [896, 504],
189
+ "original_resolution": [zed_rgb.shape[2], zed_rgb.shape[1]],
190
+ }
191
+ if zed_timestamps is not None:
192
+ meta_dict["zed_rgb"]["timestamps_ms"] = [float(t) for t in zed_timestamps]
193
+ if log:
194
+ log.info(f" ZED RGB: {zed_rgb.shape} {zed_rgb.dtype} ({rgb_codec.upper()} codec)")
195
+
196
+ # Save ZED depth as uint16 npy
197
+ if zed_depth_mm is not None:
198
+ zed_depth_path = os.path.join(output_dir, 'zed_depth.npy')
199
+ depth_uint16 = np.clip(zed_depth_mm, 0, 65535).astype(np.uint16)
200
+ np.save(zed_depth_path, depth_uint16)
201
+
202
+ meta_dict['zed_depth'] = {
203
+ 'shape': list(zed_depth_mm.shape),
204
+ 'dtype': 'uint16',
205
+ 'original_dtype': str(zed_depth_mm.dtype),
206
+ 'num_frames': int(zed_depth_mm.shape[0]),
207
+ 'depth_units': 'millimeters',
208
+ 'depth_mode': 'NEURAL_PLUS',
209
+ 'file': 'zed_depth.npy'
210
+ }
211
+ if zed_timestamps is not None:
212
+ meta_dict['zed_depth']['timestamps_ms'] = [float(t) for t in zed_timestamps]
213
+ if log:
214
+ log.info(f" ZED Depth: {zed_depth_mm.shape} -> uint16 zed_depth.npy")
215
+
216
+ # Add synchronization info to metadata
217
+ if sync_result is not None:
218
+ sync_meta = {
219
+ 'tolerance_ms': float(sync_result.tolerance_ms)
220
+ }
221
+
222
+ if hasattr(sync_result, 'triples'): # 3-way sync
223
+ radar_idx = [int(t[0]) for t in sync_result.triples]
224
+ zed_idx = [int(t[1]) for t in sync_result.triples]
225
+ dji_idx = [int(t[2]) for t in sync_result.triples]
226
+ sync_meta['sync_type'] = '3-way'
227
+ sync_meta['radar_indices'] = radar_idx
228
+ sync_meta['zed_indices'] = zed_idx
229
+ sync_meta['dji_indices'] = dji_idx
230
+ sync_meta['diffs_radar_zed_ms'] = [float(d) for d in sync_result.diffs_radar_zed_ms]
231
+ sync_meta['diffs_radar_dji_ms'] = [float(d) for d in sync_result.diffs_radar_dji_ms]
232
+ else: # 2-way sync
233
+ camera_idx = [int(p[0]) for p in sync_result.pairs]
234
+ radar_idx = [int(p[1]) for p in sync_result.pairs]
235
+ sync_meta['sync_type'] = '2-way'
236
+ sync_meta['camera_indices'] = camera_idx
237
+ sync_meta['radar_indices'] = radar_idx
238
+ sync_meta['diffs_ms'] = [float(d) for d in sync_result.diffs_ms]
239
+
240
+ meta_dict['sync'] = sync_meta
241
+
242
+ # Add optional metadata
243
+ if metadata:
244
+ meta_dict['metadata'] = metadata
245
+
246
+ # Save metadata to JSON
247
+ metadata_path = os.path.join(output_dir, 'metadata.json')
248
+ with open(metadata_path, 'w') as f:
249
+ json.dump(meta_dict, f, indent=2)
250
+
251
+ if log:
252
+ log.info(f"Metadata saved to: metadata.json")
253
+ log.info(f"Optimized files saved successfully in: {output_dir}")
254
+
255
+
256
+ def process_sequence(
257
+ sequence_dir: str,
258
+ no_radar: bool,
259
+ no_camera: bool,
260
+ no_dji: bool,
261
+ rgb_codec: str = "mjpeg",
262
+ no_doppler: bool = False,
263
+ pcd: bool = True,
264
+ base_output_dir: str = "processed",
265
+ log=None,
266
+ ):
267
+ """
268
+ Process a single sequence directory.
269
+
270
+ Args:
271
+ sequence_dir: Path to sequence directory containing sensor data files
272
+ no_radar: Skip radar processing
273
+ no_camera: Skip ZED camera (RGB + depth) processing
274
+ no_dji: Skip DJI RGB processing
275
+ log: Logger instance
276
+ """
277
+ # Fixed parameters
278
+ tolerance_ms = 50.0
279
+ enforce_one_to_one = True
280
+ depth_confidence = 100
281
+ depth_texture_confidence = 100
282
+
283
+ log.info("="*80)
284
+ log.info(f"Processing sequence: {sequence_dir}")
285
+ log.info("="*80)
286
+
287
+ # Validate options
288
+ if no_radar and no_camera and no_dji and not pcd:
289
+ log.error("Cannot skip all modalities. At least one must be processed.")
290
+ return False, 0, "all modalities skipped"
291
+
292
+ # Log processing mode
293
+ processing_modes = []
294
+ if not no_radar:
295
+ processing_modes.append("radar")
296
+ if not no_camera:
297
+ processing_modes.append("ZED RGB+depth")
298
+ if not no_dji:
299
+ processing_modes.append("DJI RGB")
300
+ if pcd:
301
+ processing_modes.append("canonical 3-D radar point clouds")
302
+ log.info(f"Processing modes: {', '.join(processing_modes)}")
303
+ log.info(f"Synchronization: 3-way (radar + ZED + DJI), tolerance={tolerance_ms}ms")
304
+
305
+ # Auto-detect files
306
+ log.info(f"Scanning directory: {sequence_dir}")
307
+ radar_h5 = _pick_latest_file(sequence_dir, "radar_*.h5")
308
+ zed_timestamps_h5 = _pick_latest_file(sequence_dir, "camera_timestamps_*.h5")
309
+ svo_path = _pick_latest_file(sequence_dir, "zed_*.svo2")
310
+ dji_timestamps_h5 = _pick_latest_file(sequence_dir, "dji_timestamps_*.h5")
311
+ dji_video_path = _pick_latest_file_multi_ext(sequence_dir, ["dji_*.mkv", "dji_*.mp4"])
312
+
313
+ log.info(f"Radar H5: {radar_h5}")
314
+ log.info(f"ZED timestamps: {zed_timestamps_h5}")
315
+ log.info(f"ZED SVO2: {svo_path}")
316
+ log.info(f"DJI timestamps: {dji_timestamps_h5}")
317
+ log.info(f"DJI video: {dji_video_path}")
318
+
319
+ # Create output directory
320
+ sequence_basename = os.path.basename(os.path.normpath(sequence_dir))
321
+ output_dir = os.path.join(base_output_dir, sequence_basename)
322
+ os.makedirs(output_dir, exist_ok=True)
323
+ log.info(f"Output directory: {output_dir}")
324
+
325
+ # Step 1: Synchronize timestamps (3-way)
326
+ log.info("Synchronizing timestamps (3-way: radar + ZED + DJI)...")
327
+ sync_result = None
328
+ try:
329
+ sync_result = synchronize_timestamps_3way(
330
+ radar_h5=radar_h5,
331
+ zed_timestamps_h5=zed_timestamps_h5,
332
+ dji_timestamps_h5=dji_timestamps_h5,
333
+ tolerance_ms=tolerance_ms,
334
+ enforce_one_to_one=enforce_one_to_one,
335
+ svo_path=svo_path,
336
+ dji_video_path=dji_video_path,
337
+ )
338
+ except (OSError, ValueError) as e:
339
+ err = f"Timestamp file corrupt or truncated: {e}"
340
+ log.error(err)
341
+ return False, 0, err
342
+ log.info(f"Synchronized {len(sync_result.triples)} triples")
343
+
344
+ if len(sync_result.triples) == 0:
345
+ log.warning("No synchronized triples found. Skipping this sequence.")
346
+ return False, 0, "no synchronized triples"
347
+
348
+ # Special handling for Razor-1 sequence: filter out frames with ZED index > 10000
349
+ sequence_name = os.path.basename(os.path.normpath(sequence_dir))
350
+ if sequence_name == "Razor-1":
351
+ zed_indices = np.array([t[1] for t in sync_result.triples], dtype=np.int64)
352
+ original_count = len(zed_indices)
353
+ valid_mask = zed_indices <= 10000
354
+
355
+ filtered_count = int(valid_mask.sum())
356
+ if filtered_count < original_count:
357
+ log.warning(f"Razor-1 sequence: Filtered out {original_count - filtered_count} frames with ZED index > 10000")
358
+ log.info(f"Remaining frames: {filtered_count}")
359
+
360
+ # Create new SyncResult3Way with filtered data
361
+ filtered_triples = [t for t, valid in zip(sync_result.triples, valid_mask) if valid]
362
+ filtered_diffs_radar_zed = np.array(sync_result.diffs_radar_zed_ms)[valid_mask]
363
+ filtered_diffs_radar_dji = np.array(sync_result.diffs_radar_dji_ms)[valid_mask]
364
+
365
+ sync_result = SyncResult3Way(
366
+ triples=filtered_triples,
367
+ diffs_radar_zed_ms=filtered_diffs_radar_zed,
368
+ diffs_radar_dji_ms=filtered_diffs_radar_dji,
369
+ radar_count=sync_result.radar_count,
370
+ zed_count=sync_result.zed_count,
371
+ dji_count=sync_result.dji_count,
372
+ tolerance_ms=sync_result.tolerance_ms
373
+ )
374
+
375
+ if len(sync_result.triples) == 0:
376
+ log.warning("Razor-1 sequence: No frames left after filtering. Skipping this sequence.")
377
+ return False, 0, "Razor-1: no frames after filter"
378
+
379
+ sync_csv_path = os.path.join(output_dir, "sync_triples.csv")
380
+ save_sync_csv(sync_csv_path, sync_result)
381
+ log.info(f"Saved sync triples: {sync_csv_path}")
382
+ radar_indices = np.array([t[0] for t in sync_result.triples], dtype=np.int64)
383
+ zed_indices = np.array([t[1] for t in sync_result.triples], dtype=np.int64)
384
+ dji_indices = np.array([t[2] for t in sync_result.triples], dtype=np.int64)
385
+
386
+ # Load timestamps for metadata
387
+ log.info("Loading timestamps for metadata...")
388
+ try:
389
+ with h5py.File(radar_h5, 'r') as f:
390
+ radar_timestamps = f['timestamps_ms'][:][radar_indices]
391
+ with h5py.File(zed_timestamps_h5, 'r') as f:
392
+ zed_timestamps = f['timestamps_ms'][:][zed_indices]
393
+ with h5py.File(dji_timestamps_h5, 'r') as f:
394
+ dji_timestamps = f['timestamps_ms'][:][dji_indices]
395
+ except (OSError, ValueError) as e:
396
+ err = f"Failed to load timestamps for metadata: {e}"
397
+ log.error(err)
398
+ return False, 0, err
399
+
400
+ if any(Path(sequence_dir).glob("max30105_*.h5")):
401
+ extract_max30105_for_sequence(
402
+ sequence_dir, radar_indices, radar_timestamps, output_dir,
403
+ max_tolerance_ms=tolerance_ms, enforce_one_to_one=enforce_one_to_one, log=log,
404
+ )
405
+ else:
406
+ log.info("No MAX30105 file; skipping optional sensor")
407
+
408
+ # Initialize data holders
409
+ radar_cube_arr = None
410
+ zed_rgb = None
411
+ zed_depth_mm = None
412
+ dji_rgb = None
413
+
414
+ # Step 2: Process radar data
415
+ if not no_radar or pcd:
416
+ log.info(f"Loading {len(radar_indices)} radar frames...")
417
+ radar_raw_frames = load_radar_frames(radar_h5, radar_indices)
418
+ log.info(f"Radar raw shape: {radar_raw_frames.shape}, dtype: {radar_raw_frames.dtype}")
419
+
420
+ radar_cubes = []
421
+ pcd_dir = os.path.join(output_dir, "pcd")
422
+ if pcd:
423
+ os.makedirs(pcd_dir, exist_ok=True)
424
+ with tqdm(total=len(radar_raw_frames), desc="Radar processing", unit="frame") as pbar:
425
+ for frame_index, frame in enumerate(radar_raw_frames):
426
+ if not no_radar:
427
+ radar_cubes.append(process_single_frame(frame, no_doppler=no_doppler))
428
+ if pcd:
429
+ np.save(os.path.join(pcd_dir, f"pcd_{frame_index}.npy"), extract_point_cloud_from_frame(frame))
430
+ pbar.update(1)
431
+ if not no_radar:
432
+ radar_cube_arr = np.stack(radar_cubes, axis=0)
433
+ log.info(f"Radar cube shape: {radar_cube_arr.shape}, dtype: {radar_cube_arr.dtype}")
434
+ else:
435
+ log.info("Skipping radar processing (--no-radar)")
436
+
437
+ # Step 3: Extract ZED RGB and depth
438
+ if not no_camera:
439
+ log.info(f"Extracting {len(zed_indices)} ZED RGB+depth frames from SVO...")
440
+ zed_rgb, zed_depth_mm, _intrinsics = extract_camera_data(
441
+ svo_path=svo_path,
442
+ frame_indices=zed_indices,
443
+ depth_mode="NEURAL_PLUS",
444
+ confidence_threshold=depth_confidence,
445
+ texture_confidence_threshold=depth_texture_confidence,
446
+ )
447
+ log.info(f"ZED RGB shape: {zed_rgb.shape}, dtype: {zed_rgb.dtype}")
448
+ log.info(f"ZED depth shape: {zed_depth_mm.shape}, dtype: {zed_depth_mm.dtype}")
449
+ else:
450
+ log.info("Skipping ZED RGB/depth extraction (--no-camera)")
451
+
452
+ # Step 4: Extract DJI RGB
453
+ if not no_dji:
454
+ log.info(f"Extracting {len(dji_indices)} DJI RGB frames from video...")
455
+ dji_rgb = extract_dji_rgb(
456
+ video_path=dji_video_path,
457
+ frame_indices=dji_indices,
458
+ )
459
+ log.info(f"DJI RGB shape: {dji_rgb.shape}, dtype: {dji_rgb.dtype}")
460
+ else:
461
+ log.info("Skipping DJI RGB extraction (--no-dji)")
462
+
463
+ # Step 5: Save output using optimized format
464
+ log.info("Saving to optimized format...")
465
+
466
+ metadata = {
467
+ 'sequence_dir': sequence_dir,
468
+ 'tolerance_ms': tolerance_ms,
469
+ 'enforce_one_to_one': enforce_one_to_one,
470
+ 'depth_confidence': depth_confidence,
471
+ 'depth_texture_confidence': depth_texture_confidence,
472
+ 'no_doppler': no_doppler,
473
+ }
474
+
475
+ save_processed_optimized(
476
+ output_dir=output_dir,
477
+ radar_cube=radar_cube_arr,
478
+ zed_rgb=zed_rgb,
479
+ zed_depth_mm=zed_depth_mm,
480
+ dji_rgb=dji_rgb,
481
+ radar_timestamps=radar_timestamps,
482
+ zed_timestamps=zed_timestamps,
483
+ dji_timestamps=dji_timestamps,
484
+ sync_result=sync_result,
485
+ metadata=metadata,
486
+ rgb_codec=rgb_codec,
487
+ radar_filename="radar_no_doppler.npy" if no_doppler else "radar.npy",
488
+ log=log,
489
+ )
490
+
491
+ log.info("Sequence processing complete.")
492
+ log.info(f"Output directory: {os.path.abspath(output_dir)}")
493
+
494
+ # Return success status and number of synced frames
495
+ num_synced_frames = len(sync_result.triples)
496
+ return True, num_synced_frames, ""
497
+
498
+
499
+ def main(
500
+ dataset: str,
501
+ sequences: Optional[list[str]] = None,
502
+ no_radar: bool = False,
503
+ no_camera: bool = False,
504
+ no_dji: bool = False,
505
+ list_unprocessed: bool = False,
506
+ rgb_codec: str = "mjpeg",
507
+ no_doppler: bool = False,
508
+ pcd: bool = True,
509
+ output_dir: str = "processed",
510
+ ):
511
+ """
512
+ Process multimodal sensor data from a dataset containing multiple sequences.
513
+
514
+ Pipeline for each sequence:
515
+ 1. Auto-detect files in sequence directory:
516
+ - radar_*.h5 (AWR1843 MIMO radar)
517
+ - camera_timestamps_*.h5 (ZED camera timestamps)
518
+ - zed_*.svo2 (ZED video with depth)
519
+ - dji_timestamps_*.h5 (DJI action camera timestamps)
520
+ - dji_*.mkv or dji_*.mp4 (DJI video)
521
+
522
+ 2. Synchronize timestamps (3-way: radar + ZED + DJI)
523
+ - tolerance_ms: 50ms (fixed)
524
+ - enforce_one_to_one: True (fixed)
525
+
526
+ 3. Extract and process synchronized frames:
527
+ - Radar: Process AWR1843 raw data to Range-Doppler-Azimuth-Elevation cube
528
+ - ZED: Extract RGB (LEFT camera) + depth maps (millimeters, confidence=100)
529
+ - DJI: Extract RGB frames
530
+
531
+ Output saved to: <output_dir>/<sequence_name>/
532
+ - radar.npy: Full Range-Doppler-Angle radar data (complex64)
533
+ - radar_no_doppler.npy: First-chirp Range-Angle data (--no-doppler)
534
+ - dji_rgb.npy: DJI RGB (N, 504, 896, 3) uint8, resized from 1920x1080
535
+ - zed_rgb.npy: ZED RGB (N, 504, 896, 3) uint8, resized from original
536
+ - zed_depth.npy: ZED depth (uint16 millimeters)
537
+ - max30105.npy: MAX30105 samples_uint32 aligned to radar timestamps
538
+ - metadata.json: Shapes, dtypes, timestamps, sync indices
539
+ - sync_triples.csv: Frame index mapping (radar, ZED, DJI)
540
+ - pcd/pcd_<index>.npy: Canonical 3-D radar points (default)
541
+
542
+ rgb_codec: Unused (kept for backward compatibility).
543
+
544
+ Args:
545
+ dataset: Path to dataset directory containing sequence subdirectories (required)
546
+ sequences: List of specific sequence names to process. If not provided, processes all
547
+ sequences found in the dataset directory. If provided, processes only the
548
+ specified sequences.
549
+ no_radar: Skip radar processing
550
+ no_camera: Skip ZED camera (RGB + depth) processing
551
+ no_dji: Skip DJI RGB processing
552
+ no_doppler: Keep only chirp 0 and skip the Doppler FFT.
553
+ pcd: Save a canonical 3-D point cloud for every synchronized radar frame (default: True).
554
+ list_unprocessed: If True, only list dataset sequences not yet in output_dir and exit
555
+ rgb_codec: "ffv1" or "mjpeg" for RGB video encoding (mjpeg = faster loading)
556
+ output_dir: Base directory where processed sequences are written
557
+
558
+ Examples:
559
+ # Process all sequences in Data directory
560
+ python processor.py --dataset Data
561
+
562
+ # Process specific sequences only
563
+ python processor.py --dataset Data --sequences seq1 seq2 seq3
564
+
565
+ # Process without radar
566
+ python processor.py --dataset Data --no-radar
567
+
568
+ # Process only camera data
569
+ python processor.py --dataset Data --no-radar --no-dji
570
+
571
+ # Skip point clouds if only array outputs are needed
572
+ python processor.py --dataset Data --no-pcd
573
+ """
574
+ log = setup_logging("Processor")
575
+
576
+ log.info("=" * 80)
577
+ log.info("MobiCom Multimodal Dataset Processor")
578
+ log.info("=" * 80)
579
+ log.info(f"Dataset path: {dataset}")
580
+ log.info("Output format: Optimized (NPY for radar and RGB, ZED depth uint16)")
581
+ log.info(f"Base output directory: {output_dir}")
582
+
583
+ # Validate dataset path
584
+ if not os.path.isdir(dataset):
585
+ log.error(f"Dataset directory not found: {dataset}")
586
+ return
587
+
588
+ # Validate options
589
+ if no_radar and no_camera and no_dji and not pcd and not list_unprocessed:
590
+ log.error("Cannot skip all modalities. At least one must be processed.")
591
+ return
592
+
593
+ # Get list of sequences to process
594
+ if sequences is None or len(sequences) == 0:
595
+ # Process all subdirectories in dataset
596
+ sequences = [d for d in os.listdir(dataset)
597
+ if os.path.isdir(os.path.join(dataset, d))]
598
+ sequences.sort()
599
+ log.info(f"Found {len(sequences)} sequences in dataset: {sequences}")
600
+ else:
601
+ log.info(f"Processing {len(sequences)} specified sequences: {sequences}")
602
+
603
+ if list_unprocessed:
604
+ processed_dir = output_dir
605
+ done = set()
606
+ if os.path.isdir(processed_dir):
607
+ for name in os.listdir(processed_dir):
608
+ meta = os.path.join(processed_dir, name, "metadata.json")
609
+ if os.path.isfile(meta):
610
+ done.add(name)
611
+ unprocessed = [s for s in sequences if s not in done]
612
+ log.info(f"Sequences not yet processed ({len(unprocessed)}): {unprocessed}")
613
+ return
614
+
615
+ # Process each sequence
616
+ success_count = 0
617
+ total_synced_frames = 0
618
+ failed_sequences = []
619
+
620
+ for i, seq_name in enumerate(sequences, 1):
621
+ seq_path = os.path.join(dataset, seq_name)
622
+
623
+ if not os.path.isdir(seq_path):
624
+ log.warning(f"Sequence directory not found, skipping: {seq_path}")
625
+ failed_sequences.append((seq_name, "directory not found", 0))
626
+ continue
627
+
628
+ log.info(f"\n[{i}/{len(sequences)}] Processing sequence: {seq_name}")
629
+
630
+ success, num_frames, reason = process_sequence(
631
+ sequence_dir=seq_path,
632
+ no_radar=no_radar,
633
+ no_camera=no_camera,
634
+ no_dji=no_dji,
635
+ rgb_codec=rgb_codec,
636
+ no_doppler=no_doppler,
637
+ pcd=pcd,
638
+ base_output_dir=output_dir,
639
+ log=log,
640
+ )
641
+
642
+ if success:
643
+ success_count += 1
644
+ total_synced_frames += num_frames
645
+ log.info(f"✓ Successfully processed: {seq_name} ({num_frames} synced frames)")
646
+ else:
647
+ failed_sequences.append((seq_name, reason or "processing failed", num_frames))
648
+ log.warning(f"✗ Failed to process: {seq_name}")
649
+
650
+ # Summary
651
+ log.info("\n" + "="*80)
652
+ log.info("Processing Summary")
653
+ log.info("="*80)
654
+ log.info(f"Total sequences: {len(sequences)}")
655
+ log.info(f"Successfully processed: {success_count}")
656
+ log.info(f"Failed: {len(failed_sequences)}")
657
+ log.info(f"Total synced frames saved: {total_synced_frames}")
658
+
659
+ if failed_sequences:
660
+ log.warning("\nFailed sequences:")
661
+ for seq_name, reason, _ in failed_sequences:
662
+ log.warning(f" - {seq_name}: {reason}")
663
+
664
+ log.info(f"\nOutput directory: {os.path.abspath(output_dir)}")
665
+
666
+
667
+ if __name__ == "__main__":
668
+ tyro.cli(main)
processing_code/requirements.txt ADDED
@@ -0,0 +1,12 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ # Python dependencies for processor.py and the canonical 3-D point-cloud output.
2
+ numpy>=1.26
3
+ opencv-python>=4.8
4
+ h5py>=3.10
5
+ tyro>=0.8
6
+ rich>=13.0
7
+ tqdm>=4.66
8
+
9
+ # ZED SDK requirement (not installed through pip):
10
+ # Install the Stereolabs ZED SDK for your platform, including its Python API.
11
+ # It must make `import pyzed.sl` work in the Python environment used here.
12
+ # Download: https://www.stereolabs.com/developers/release/
processing_code/utils/extract_camera_data.py ADDED
@@ -0,0 +1,172 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ import os
2
+ import logging
3
+ from typing import Iterable, Tuple
4
+
5
+ import cv2
6
+ import numpy as np
7
+ import pyzed.sl as sl
8
+ from tqdm import tqdm
9
+
10
+ log = logging.getLogger(__name__)
11
+
12
+
13
+ def extract_camera_data(
14
+ svo_path: str,
15
+ frame_indices: Iterable[int],
16
+ depth_mode: str = "NEURAL_PLUS",
17
+ confidence_threshold: int = 100,
18
+ texture_confidence_threshold: int = 100,
19
+ ) -> Tuple[np.ndarray, np.ndarray, np.ndarray]:
20
+ """
21
+ Extract selected RGB and depth frames from a recorded SVO/SVO2.
22
+
23
+ This function ensures 1:1 pixel alignment between RGB and depth by:
24
+ - Using the same rectified view (sl.VIEW.LEFT) for RGB
25
+ - Using sl.MEASURE.DEPTH which matches the rectified resolution
26
+ - Validating dimensions on the first frame to catch FOV mismatches
27
+
28
+ Parameters:
29
+ - svo_path: path to the .svo/.svo2 file recorded by `src/cameraRecorder.py`.
30
+ - frame_indices: iterable of camera frame indices to keep
31
+ (e.g. the `camera_frame_idx` column from `sync_pairs.csv`).
32
+ - depth_mode: ZED depth mode, e.g. "NEURAL_PLUS" for the finest model.
33
+ Note: NEURAL modes may fill in peripheral regions beyond traditional stereo overlap.
34
+ - confidence_threshold: Depth confidence threshold (1-100). Higher values (closer to 100)
35
+ fill in more depth holes but may add noise. Lower values filter more strictly.
36
+ Default: 100 (least filtering, most coverage).
37
+ - texture_confidence_threshold: Texture confidence threshold (1-100). Controls depth
38
+ estimation in uniform/textureless areas. Lower values allow depth in less detailed
39
+ regions. Default: 100 (least filtering).
40
+
41
+ Returns:
42
+ - rgb: array of shape (N, H, W, 3), dtype uint8, LEFT camera RGB frames (rectified).
43
+ - depth_mm: array of shape (N, H, W), dtype float32, depth in millimeters (rectified).
44
+ RGB and depth are guaranteed to have identical (H, W) dimensions for 1:1 alignment.
45
+ - intrinsics: array of shape (4,), dtype float32, `[fx, fy, cx, cy]` for the
46
+ rectified LEFT camera. These intrinsics apply to all returned frames.
47
+ """
48
+ if not os.path.exists(svo_path):
49
+ raise FileNotFoundError(f"SVO not found: {svo_path}")
50
+
51
+ indices = np.asarray(list(frame_indices), dtype=np.int64)
52
+ if indices.size == 0:
53
+ return (
54
+ np.empty((0, 0, 0, 3), dtype=np.uint8),
55
+ np.empty((0, 0), dtype=np.float32),
56
+ np.empty((4,), dtype=np.float32),
57
+ )
58
+
59
+ # Ensure indices are sorted and unique.
60
+ indices = np.unique(indices)
61
+
62
+ init = sl.InitParameters()
63
+ init.set_from_svo_file(svo_path)
64
+ init.svo_real_time_mode = False # Process SVO as fast as possible
65
+ init.depth_mode = getattr(sl.DEPTH_MODE, depth_mode.upper().replace(" ", "_"), sl.DEPTH_MODE.NEURAL)
66
+ init.coordinate_units = sl.UNIT.MILLIMETER # depth in millimeters
67
+
68
+ zed = sl.Camera()
69
+ status = zed.open(init)
70
+ if status != sl.ERROR_CODE.SUCCESS:
71
+ raise RuntimeError(f"Failed to open SVO: {status}")
72
+
73
+ log.info(f"Opened SVO with depth mode: {depth_mode}")
74
+
75
+ # Validate camera calibration and resolution to ensure 1:1 RGB-Depth alignment
76
+ cam_info = zed.get_camera_information()
77
+ resolution = cam_info.camera_configuration.resolution
78
+ calib = cam_info.camera_configuration.calibration_parameters.left_cam
79
+
80
+ log.info(f"Camera resolution: {resolution.width}x{resolution.height}")
81
+ log.info(f"Left camera calibration - fx={calib.fx:.2f}, fy={calib.fy:.2f}, cx={calib.cx:.2f}, cy={calib.cy:.2f}")
82
+ intrinsics = np.array(
83
+ [calib.fx, calib.fy, calib.cx, calib.cy],
84
+ dtype=np.float32,
85
+ )
86
+
87
+ # Configure runtime parameters for depth estimation
88
+ runtime_params = sl.RuntimeParameters()
89
+ runtime_params.confidence_threshold = confidence_threshold
90
+ runtime_params.texture_confidence_threshold = texture_confidence_threshold
91
+ log.info(f"Depth confidence thresholds: confidence={confidence_threshold}, texture={texture_confidence_threshold}")
92
+
93
+ num_frames_svo = zed.get_svo_number_of_frames()
94
+ log.info(f"SVO contains {num_frames_svo} frames")
95
+ log.info(f"Extracting {len(indices)} frame indices (min={indices.min()}, max={indices.max()})")
96
+
97
+ # Convert indices to a set for O(1) lookup
98
+ indices_set = set(indices.tolist())
99
+
100
+ rgb_frames: list[np.ndarray] = []
101
+ depth_frames: list[np.ndarray] = []
102
+
103
+ image_left = sl.Mat()
104
+ depth_mat = sl.Mat()
105
+
106
+ try:
107
+ # Loop through all frames in SVO sequentially
108
+ # We must process sequentially because SVO cannot seek randomly
109
+ extracted_count = 0
110
+ first_frame_validated = False
111
+
112
+ with tqdm(total=len(indices), desc="ZED camera extraction", unit="frame") as pbar:
113
+ for frame_idx in range(num_frames_svo):
114
+ # Grab the next frame from SVO
115
+ grab_status = zed.grab(runtime_params)
116
+ if grab_status != sl.ERROR_CODE.SUCCESS:
117
+ # End of file or error
118
+ log.warning(f"Grab failed at frame {frame_idx}: {grab_status}")
119
+ break
120
+
121
+ # Always retrieve RGB and depth after grab() to keep SDK state clean
122
+ # RGB: LEFT view (rectified)
123
+ zed.retrieve_image(image_left, sl.VIEW.LEFT)
124
+ bgra = image_left.get_data() # (H, W, 4) uint8 - ZED SDK returns BGRA
125
+ rgb = cv2.cvtColor(bgra, cv2.COLOR_BGRA2RGB) # (H, W, 3) uint8
126
+
127
+ # Depth (millimeters) - should match RGB resolution
128
+ zed.retrieve_measure(depth_mat, sl.MEASURE.DEPTH)
129
+ depth = depth_mat.get_data() # (H, W) or (H, W, 1) - ZED reuses this buffer
130
+ depth = np.asarray(depth, dtype=np.float32).squeeze().copy() # (H, W) float32, own copy to prevent buffer reuse issues
131
+
132
+ # Replace NaN values with 0 (invalid depth)
133
+ depth = np.nan_to_num(depth, nan=0.0)
134
+
135
+ # Validate 1:1 alignment on first frame
136
+ if not first_frame_validated:
137
+ if rgb.shape[:2] != depth.shape:
138
+ raise ValueError(
139
+ f"RGB-Depth dimension mismatch! RGB: {rgb.shape[:2]}, Depth: {depth.shape}. "
140
+ f"This indicates FOV alignment issues."
141
+ )
142
+ log.info(f"✓ Validated 1:1 RGB-Depth alignment: {rgb.shape[:2]}")
143
+ first_frame_validated = True
144
+
145
+ # Only keep this frame if it's in our desired indices
146
+ if frame_idx in indices_set:
147
+ rgb_frames.append(rgb)
148
+ depth_frames.append(depth)
149
+ extracted_count += 1
150
+ pbar.update(1)
151
+ if extracted_count == len(indices):
152
+ break
153
+ # If frame_idx not in indices_set, we skip this frame (don't append)
154
+
155
+ log.info(f"Finished: Extracted {extracted_count}/{len(indices)} frames from {num_frames_svo} total frames")
156
+ finally:
157
+ zed.close()
158
+
159
+ if not rgb_frames:
160
+ log.warning("No frames were extracted!")
161
+ return (
162
+ np.empty((0, 0, 0, 3), dtype=np.uint8),
163
+ np.empty((0, 0), dtype=np.float32),
164
+ intrinsics,
165
+ )
166
+
167
+ rgb_arr = np.stack(rgb_frames, axis=0)
168
+ depth_arr = np.stack(depth_frames, axis=0)
169
+
170
+ log.info(f"Final arrays - RGB: {rgb_arr.shape}, Depth: {depth_arr.shape}")
171
+
172
+ return rgb_arr, depth_arr, intrinsics
processing_code/utils/extract_dji_data.py ADDED
@@ -0,0 +1,85 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ import os
2
+ import logging
3
+ from typing import Iterable
4
+
5
+ import cv2
6
+ import numpy as np
7
+ from tqdm import tqdm
8
+
9
+ log = logging.getLogger(__name__)
10
+
11
+
12
+ def extract_dji_rgb(
13
+ video_path: str,
14
+ frame_indices: Iterable[int],
15
+ ) -> np.ndarray:
16
+ """
17
+ Extract selected RGB frames from DJI video (MP4/MKV).
18
+
19
+ Parameters:
20
+ - video_path: path to the video file recorded by `src/djiRecorder.py`.
21
+ - frame_indices: iterable of DJI frame indices to keep
22
+ (e.g. the `dji_frame_idx` column from `sync_triples.csv`).
23
+
24
+ Returns:
25
+ - rgb: array of shape (N, H, W, 3), dtype uint8, RGB frames.
26
+
27
+ Note: The video was already flipped (UD+LR) during recording, so no
28
+ additional transformations are needed here.
29
+ """
30
+ if not os.path.exists(video_path):
31
+ raise FileNotFoundError(f"DJI video not found: {video_path}")
32
+
33
+ indices = np.asarray(list(frame_indices), dtype=np.int64)
34
+ if indices.size == 0:
35
+ return np.empty((0, 0, 0, 3), dtype=np.uint8)
36
+
37
+ # Ensure indices are sorted and unique
38
+ indices = np.unique(indices)
39
+ indices_set = set(indices.tolist())
40
+
41
+ # Open video
42
+ cap = cv2.VideoCapture(video_path)
43
+ if not cap.isOpened():
44
+ raise RuntimeError(f"Failed to open DJI video: {video_path}")
45
+
46
+ total_frames = int(cap.get(cv2.CAP_PROP_FRAME_COUNT))
47
+ width = int(cap.get(cv2.CAP_PROP_FRAME_WIDTH))
48
+ height = int(cap.get(cv2.CAP_PROP_FRAME_HEIGHT))
49
+ fps = cap.get(cv2.CAP_PROP_FPS)
50
+
51
+ log.info(f"DJI video: {width}x{height} @ {fps:.2f} FPS, {total_frames} frames")
52
+ log.info(f"Extracting {len(indices)} frame indices (min={indices.min()}, max={indices.max()})")
53
+
54
+ rgb_frames = []
55
+ frame_idx = 0
56
+ extracted_count = 0
57
+
58
+ with tqdm(total=len(indices), desc="DJI extraction", unit="frame") as pbar:
59
+ while frame_idx < total_frames:
60
+ ret, frame = cap.read()
61
+ if not ret:
62
+ break
63
+
64
+ if frame_idx in indices_set:
65
+ # OpenCV reads in BGR, convert to RGB
66
+ rgb = cv2.cvtColor(frame, cv2.COLOR_BGR2RGB)
67
+ rgb_frames.append(rgb)
68
+ extracted_count += 1
69
+ pbar.update(1)
70
+ if extracted_count == len(indices):
71
+ break
72
+
73
+ frame_idx += 1
74
+
75
+ cap.release()
76
+ log.info(f"Finished: Extracted {extracted_count}/{len(indices)} DJI frames from {frame_idx} total frames")
77
+
78
+ if not rgb_frames:
79
+ log.warning("No DJI frames were extracted!")
80
+ return np.empty((0, 0, 0, 3), dtype=np.uint8)
81
+
82
+ rgb_arr = np.stack(rgb_frames, axis=0)
83
+ log.info(f"Final DJI RGB array: {rgb_arr.shape}")
84
+
85
+ return rgb_arr
processing_code/utils/extract_max_data.py ADDED
@@ -0,0 +1,162 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ import os
2
+ import logging
3
+ from typing import Optional, List, Dict
4
+
5
+ import h5py
6
+ import numpy as np
7
+
8
+ from utils.sync_timestamps import _pick_latest_file
9
+
10
+
11
+ def _load_max30105_h5(max_h5_path: str) -> Dict[str, np.ndarray]:
12
+ """
13
+ Load MAX30105 timestamps and samples from HDF5.
14
+
15
+ Expected datasets:
16
+ - 'timestamps_ms' (milliseconds since Unix epoch)
17
+ - 'samples_uint32' with the same first dimension as timestamps
18
+ """
19
+ with h5py.File(max_h5_path, "r") as f:
20
+ if "timestamps_ms" not in f:
21
+ raise ValueError(
22
+ f"'timestamps_ms' dataset not found in MAX30105 HDF5 file: {max_h5_path}"
23
+ )
24
+
25
+ ts = np.asarray(f["timestamps_ms"][:], dtype=np.float64)
26
+ if ts.ndim != 1:
27
+ raise ValueError(
28
+ f"Expected 1D 'timestamps_ms' in {max_h5_path}, got shape {ts.shape}"
29
+ )
30
+
31
+ data: Dict[str, np.ndarray] = {"timestamps_ms": ts}
32
+
33
+ # Main MAX30105 sample dataset (typically shape (N, 3) uint32)
34
+ if "samples_uint32" not in f:
35
+ raise ValueError(
36
+ f"'samples_uint32' dataset not found in MAX30105 HDF5 file: {max_h5_path}"
37
+ )
38
+ samples = np.asarray(f["samples_uint32"][:])
39
+ if samples.shape[0] != ts.shape[0]:
40
+ raise ValueError(
41
+ f"'samples_uint32' length {samples.shape[0]} does not match "
42
+ f"timestamps length {ts.shape[0]} in {max_h5_path}"
43
+ )
44
+ data["samples_uint32"] = samples
45
+
46
+ return data
47
+
48
+
49
+ def _align_max_to_radar(
50
+ radar_indices: np.ndarray,
51
+ radar_ts: np.ndarray,
52
+ max_data: Dict[str, np.ndarray],
53
+ max_tolerance_ms: float,
54
+ enforce_one_to_one: bool,
55
+ ) -> Dict[str, np.ndarray]:
56
+ """
57
+ For each synchronized radar timestamp, find the nearest MAX30105 sample.
58
+
59
+ Returns a dict with per-channel arrays for each present channel (e.g. 'samples_uint32'),
60
+ aligned to the subset of synchronized radar timestamps that could be matched within
61
+ `max_tolerance_ms`.
62
+ """
63
+ max_ts = max_data["timestamps_ms"].astype(np.float64, copy=False)
64
+
65
+ matched_channels: Dict[str, List[np.ndarray]] = {
66
+ ch: [] for ch in max_data.keys() if ch != "timestamps_ms"
67
+ }
68
+
69
+ used_max = set() if enforce_one_to_one else None
70
+
71
+ for radar_idx, r_t in zip(radar_indices, radar_ts):
72
+ insert_idx = int(np.searchsorted(max_ts, r_t))
73
+
74
+ # Nearest neighbor search (optionally one-to-one)
75
+ cand0 = insert_idx - 1 if insert_idx > 0 else None
76
+ cand1 = insert_idx if insert_idx < len(max_ts) else None
77
+
78
+ best_idx: Optional[int] = None
79
+ best_abs = float("inf")
80
+ for cand in (cand0, cand1):
81
+ if cand is None:
82
+ continue
83
+ if enforce_one_to_one and cand in used_max:
84
+ continue
85
+ abs_diff = abs(float(max_ts[cand] - r_t))
86
+ if abs_diff < best_abs:
87
+ best_abs = abs_diff
88
+ best_idx = int(cand)
89
+
90
+ if best_idx is None:
91
+ continue
92
+
93
+ diff = float(r_t - max_ts[best_idx])
94
+ if abs(diff) > max_tolerance_ms:
95
+ continue
96
+
97
+ for ch, lst in matched_channels.items():
98
+ lst.append(max_data[ch][best_idx])
99
+
100
+ if enforce_one_to_one:
101
+ used_max.add(best_idx)
102
+
103
+ out: Dict[str, np.ndarray] = {}
104
+ for ch, lst in matched_channels.items():
105
+ out[ch] = np.asarray(lst)
106
+
107
+ return out
108
+
109
+
110
+ def extract_max30105_for_sequence(
111
+ sequence_dir: str,
112
+ radar_indices: np.ndarray,
113
+ radar_timestamps: np.ndarray,
114
+ output_dir: str,
115
+ max_tolerance_ms: float = 50.0,
116
+ enforce_one_to_one: bool = True,
117
+ log: Optional[logging.Logger] = None,
118
+ ) -> int:
119
+ """
120
+ Extract MAX30105 samples aligned to synchronized radar timestamps for a sequence
121
+ and save them as max30105.npy in the given output directory.
122
+ """
123
+ seq_name = os.path.basename(os.path.normpath(sequence_dir))
124
+
125
+ max_h5 = _pick_latest_file(sequence_dir, "max30105_*.h5")
126
+ if log:
127
+ log.info(f"MAX30105 H5: {max_h5}")
128
+
129
+ max_data = _load_max30105_h5(max_h5)
130
+
131
+ aligned = _align_max_to_radar(
132
+ radar_indices=radar_indices,
133
+ radar_ts=radar_timestamps,
134
+ max_data=max_data,
135
+ max_tolerance_ms=max_tolerance_ms,
136
+ enforce_one_to_one=enforce_one_to_one,
137
+ )
138
+
139
+ any_channel = next((arr for arr in aligned.values()), None)
140
+ num_matched = int(any_channel.shape[0]) if any_channel is not None else 0
141
+ if log:
142
+ log.info(
143
+ f"Matched {num_matched} MAX30105 samples to synchronized radar frames."
144
+ )
145
+
146
+ samples = aligned.get("samples_uint32")
147
+ if samples is None:
148
+ if log:
149
+ log.warning(
150
+ "No 'samples_uint32' channel found in aligned MAX30105 data; nothing saved."
151
+ )
152
+ return num_matched
153
+
154
+ os.makedirs(output_dir, exist_ok=True)
155
+ out_path = os.path.join(output_dir, "max30105.npy")
156
+ np.save(out_path, samples)
157
+
158
+ if log:
159
+ log.info(f"Saved extracted MAX30105 readings to: {out_path}")
160
+
161
+ return num_matched
162
+
processing_code/utils/extract_pcd.py ADDED
@@ -0,0 +1,126 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ """Canonical 3-D radar point-cloud extraction used by ``processor --pcd``."""
2
+
3
+ import numpy as np
4
+
5
+ from utils.extract_radar_data import iiqq_to_iq, mimo
6
+
7
+ RANGE_FFT_SIZE = 256
8
+ DOPPLER_FFT_SIZE = 64
9
+ AZIMUTH_FFT_SIZE = 32
10
+ ELEVATION_FFT_SIZE = 8
11
+ RANGE_RES_M = 0.04375
12
+ CAMERA_POS_IN_RADAR_M = np.array([-0.08, 0.10, 0.05], dtype=np.float32)
13
+
14
+
15
+ def _hann(length: int) -> np.ndarray:
16
+ return np.ones(length, dtype=np.float32) if length <= 2 else np.hanning(length).astype(np.float32)
17
+
18
+
19
+ def _fft(data: np.ndarray, axis: int, size: int | None = None, shift: bool = False) -> np.ndarray:
20
+ shape = [1] * data.ndim
21
+ shape[axis] = data.shape[axis]
22
+ result = np.fft.fft(data * _hann(data.shape[axis]).reshape(shape), n=size, axis=axis)
23
+ return np.fft.fftshift(result, axes=axis) if shift else result
24
+
25
+
26
+ def _training(values: np.ndarray, index: int, win: int, guard: int, cyclic: bool):
27
+ left = np.arange(index - guard - win, index - guard)
28
+ right = np.arange(index + guard + 1, index + guard + win + 1)
29
+ if cyclic:
30
+ return values[left % len(values)], values[right % len(values)]
31
+ if left[0] < 0 or right[-1] >= len(values):
32
+ return None, None
33
+ return values[left], values[right]
34
+
35
+
36
+ def _cfar(values: np.ndarray, axis: int, mode: int, win: int, guard: int, noise_div: int, cyclic: bool, threshold_db: float) -> np.ndarray:
37
+ data = np.moveaxis(values, axis, -1)
38
+ detected = np.zeros_like(data, dtype=bool)
39
+ scale = 10.0 ** (threshold_db / 20.0)
40
+ for outer in np.ndindex(data.shape[:-1]):
41
+ row = data[outer]
42
+ for cut in range(len(row)):
43
+ left, right = _training(row, cut, win, guard, cyclic)
44
+ if left is None:
45
+ continue
46
+ left_sum, right_sum = float(left.sum()), float(right.sum())
47
+ if mode == 0:
48
+ noise = (left_sum + right_sum) / (2**noise_div)
49
+ elif mode == 1:
50
+ noise = max(left_sum, right_sum) / (2**noise_div)
51
+ else:
52
+ noise = min(left_sum, right_sum) / (2**noise_div)
53
+ detected[outer + (cut,)] = row[cut] > noise * scale
54
+ return np.moveaxis(detected, -1, axis)
55
+
56
+
57
+ def _local_maxima(values: np.ndarray) -> np.ndarray:
58
+ rows, cols = values.shape
59
+ output = np.zeros_like(values, dtype=bool)
60
+ for row in range(rows):
61
+ for col in range(cols):
62
+ center = values[row, col]
63
+ maximum = True
64
+ for dr in (-1, 0, 1):
65
+ for dc in (-1, 0, 1):
66
+ if dr == dc == 0:
67
+ continue
68
+ rr = (row + dr) % rows
69
+ cc = col + dc
70
+ if cc < 0 or cc >= cols:
71
+ continue
72
+ if values[rr, cc] >= center:
73
+ maximum = False
74
+ break
75
+ if not maximum:
76
+ break
77
+ output[row, col] = maximum
78
+ return output
79
+
80
+
81
+ def _xyz(snapshot: np.ndarray, range_m: float) -> np.ndarray | None:
82
+ window = _hann(2)[:, None] * _hann(8)[None, :]
83
+ spectrum = np.fft.fftshift(np.fft.fft2(snapshot * window, s=(ELEVATION_FFT_SIZE, AZIMUTH_FFT_SIZE)), axes=(0, 1))
84
+ elevation, azimuth = np.unravel_index(np.abs(spectrum).argmax(), spectrum.shape)
85
+ ux = float(np.clip(2.0 * (azimuth - AZIMUTH_FFT_SIZE // 2) / AZIMUTH_FFT_SIZE, -1, 1))
86
+ uy = float(np.clip(2.0 * (elevation - ELEVATION_FFT_SIZE // 2) / ELEVATION_FFT_SIZE, -1, 1))
87
+ uz_sq = 1.0 - ux * ux - uy * uy
88
+ if uz_sq <= 0:
89
+ return None
90
+ return np.array([range_m * ux, range_m * uy, range_m * np.sqrt(uz_sq)], dtype=np.float32)
91
+
92
+
93
+ def _nearest_per_ray(points: np.ndarray) -> np.ndarray:
94
+ if len(points) == 0:
95
+ return np.empty((0, 3), dtype=np.float32)
96
+ ranges = np.linalg.norm(points, axis=1)
97
+ valid = ranges > 1e-6
98
+ points, ranges = points[valid], ranges[valid]
99
+ chosen: dict[tuple[float, float, float], int] = {}
100
+ for index, (direction, distance) in enumerate(zip(np.round(points / ranges[:, None], 6), ranges)):
101
+ key = tuple(float(x) for x in direction)
102
+ if key not in chosen or distance < ranges[chosen[key]]:
103
+ chosen[key] = index
104
+ return points[np.array(sorted(chosen.values()), dtype=np.int64)].astype(np.float32)
105
+
106
+
107
+ def extract_point_cloud_from_frame(iiqq_frame: np.ndarray) -> np.ndarray:
108
+ """Return canonical ``(N, 3) float32`` camera-frame XYZ radar points."""
109
+ virtual = mimo(iiqq_to_iq(iiqq_frame))
110
+ range_fft = _fft(virtual, axis=-1, size=RANGE_FFT_SIZE)
111
+ doppler_fft = _fft(range_fft, axis=0, size=DOPPLER_FFT_SIZE, shift=True)
112
+ rd_map = np.sqrt(np.sum(np.abs(doppler_fft) ** 2, axis=(1, 2))).astype(np.float32)
113
+ mask = _cfar(rd_map, 1, 2, 8, 4, 3, False, 15.0)
114
+ mask &= _cfar(rd_map, 0, 0, 4, 2, 3, True, 15.0)
115
+ mask &= _local_maxima(rd_map)
116
+ points = []
117
+ for doppler, range_bin in zip(*np.nonzero(mask)):
118
+ range_m = float(range_bin) * RANGE_RES_M
119
+ if range_m > 10.60:
120
+ continue
121
+ point = _xyz(doppler_fft[doppler, :, :, range_bin], range_m)
122
+ if point is not None:
123
+ points.append(point)
124
+ if not points:
125
+ return np.empty((0, 3), dtype=np.float32)
126
+ return (_nearest_per_ray(np.stack(points, axis=0)) - CAMERA_POS_IN_RADAR_M).astype(np.float32)
processing_code/utils/extract_radar_data.py ADDED
@@ -0,0 +1,110 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ import numpy as np
2
+
3
+ def iiqq_to_iq(iiqq: np.ndarray) -> np.ndarray:
4
+ """
5
+ Convert interleaved IIQQ radar data to complex IQ format.
6
+
7
+ Args:
8
+ iiqq: Input array with shape [..., N] where N is divisible by 4
9
+
10
+ Returns:
11
+ Complex array with shape [..., N/2] and dtype complex64
12
+ """
13
+ if iiqq.dtype == np.complex64:
14
+ return iiqq
15
+
16
+ shape = (*iiqq.shape[:-1], iiqq.shape[-1] // 2)
17
+ iq = np.zeros(shape, dtype=np.complex64)
18
+ iq[..., 0::2] = 1j * iiqq[..., 0::4] + iiqq[..., 2::4]
19
+ iq[..., 1::2] = 1j * iiqq[..., 1::4] + iiqq[..., 3::4]
20
+ return iq
21
+
22
+
23
+ def mimo(data: np.ndarray) -> np.ndarray:
24
+ """
25
+ Convert raw radar data to MIMO virtual array format.
26
+ Maps (batch, doppler, tx, rx, range) -> (batch, doppler, elevation, azimuth, range).
27
+
28
+ Args:
29
+ data: Input array with shape [..., tx, rx, range]
30
+ tx=3, rx=4
31
+
32
+ Returns:
33
+ Virtual array with shape [..., 2, 8, range]
34
+ """
35
+ if len(data.shape) == 5:
36
+ # batch, doppler, tx, rx, range = data.shape
37
+ # mimo_data = np.zeros((batch, doppler, 2, 8, range), dtype=np.complex64)
38
+ # mimo_data[:, :, 0, 2:6, :] = data[:, :, 1, :, :]
39
+ # mimo_data[:, :, 1, 0:4, :] = data[:, :, 0, :, :]
40
+ # mimo_data[:, :, 1, 4:8, :] = data[:, :, 2, :, :]
41
+ raise NotImplementedError(f"Batch operation not supported.")
42
+ elif len(data.shape) == 4:
43
+ doppler, tx, rx, range = data.shape
44
+ mimo_data = np.zeros((doppler, 2, 8, range), dtype=np.complex64)
45
+ mimo_data[:, 0, 2:6, :] = data[:, 1, :, :]
46
+ mimo_data[:, 1, 0:4, :] = data[:, 0, :, :]
47
+ mimo_data[:, 1, 4:8, :] = data[:, 2, :, :]
48
+ else:
49
+ raise ValueError(f"Expected 4D or 5D input, got shape {data.shape}")
50
+
51
+ return mimo_data
52
+
53
+
54
+ def fft_w_shift(data: np.ndarray, dim: int = -1, shift: bool = False) -> np.ndarray:
55
+ """
56
+ Apply FFT to data with shift to center the zero frequency component.
57
+ """
58
+ fft_array = np.fft.fft(data, axis=dim)
59
+ if shift:
60
+ fft_array = np.fft.fftshift(fft_array, axes=dim)
61
+ return fft_array
62
+
63
+
64
+ def range_doppler_fft(data: np.ndarray) -> np.ndarray:
65
+ """
66
+ Apply FFT to data in range and doppler dimensions.
67
+ """
68
+ range_fft = fft_w_shift(data, dim=-1, shift=False)
69
+ doppler_fft = fft_w_shift(range_fft, dim=0, shift=True)
70
+ return doppler_fft
71
+
72
+
73
+ def azimuth_elevation_fft(data: np.ndarray) -> np.ndarray:
74
+ """
75
+ Apply FFT to data in azimuth and elevation dimensions.
76
+ """
77
+ # Axis 1 is Elevation (size 2), Axis 2 is Azimuth (size 8)
78
+ elevation_fft = fft_w_shift(data, dim=1, shift=True)
79
+ azimuth_fft = fft_w_shift(elevation_fft, dim=2, shift=True)
80
+ return azimuth_fft
81
+
82
+
83
+ def process_single_frame(iiqq: np.ndarray, no_doppler: bool = False) -> np.ndarray:
84
+ """
85
+ Process a single (non-batched) frame of radar data.
86
+
87
+ Args:
88
+ iiqq: Raw data with shape (doppler, tx, rx, range).
89
+ no_doppler: Keep only chirp 0 as a size-one Doppler axis and skip the
90
+ Doppler FFT. This is intentionally applied before any Doppler
91
+ transform; it is not a slice of the full Doppler FFT output.
92
+
93
+ Returns:
94
+ A complex cube with shape (doppler, elevation, azimuth, range). The
95
+ Doppler axis has length one when ``no_doppler`` is true.
96
+ """
97
+ iq_data = iiqq_to_iq(iiqq)
98
+ # Maps (doppler, tx, rx, range) -> (doppler, elevation, azimuth, range).
99
+ mimo_data = mimo(iq_data)
100
+ if no_doppler:
101
+ # Preserve only the first slow-time sample and perform the range FFT.
102
+ # Keeping the leading dimension makes the output layout consistent
103
+ # with the full range-Doppler processing path.
104
+ range_doppler_fft_data = fft_w_shift(mimo_data[0:1], dim=-1, shift=False)
105
+ else:
106
+ # Apply range-doppler FFT
107
+ range_doppler_fft_data = range_doppler_fft(mimo_data)
108
+ # Apply azimuth-elevation FFT
109
+ azimuth_elevation_fft_data = azimuth_elevation_fft(range_doppler_fft_data)
110
+ return azimuth_elevation_fft_data
processing_code/utils/sync_timestamps.py ADDED
@@ -0,0 +1,496 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ import numpy as np
2
+ import h5py
3
+ import logging
4
+ from dataclasses import dataclass
5
+ from typing import List, Tuple, Optional, Literal, Union
6
+ import os
7
+ import glob
8
+ import tyro
9
+ import pyzed.sl as sl
10
+
11
+ def setup_logging(name):
12
+ logging.basicConfig(level=logging.INFO, format='%(name)s - %(levelname)s - %(message)s')
13
+ return logging.getLogger(name)
14
+
15
+ log = setup_logging("Sync")
16
+
17
+ def _load_h5_dataset_1d(h5_path: str, dataset: str) -> np.ndarray:
18
+ """
19
+ Load a 1D dataset from an HDF5 file.
20
+ """
21
+ with h5py.File(h5_path, 'r') as f:
22
+ if dataset not in f:
23
+ raise ValueError(f"Dataset not found in HDF5 file: {dataset!r} (file: {h5_path})")
24
+ dset = f[dataset]
25
+ # Many recorders preallocate more slots than actual frames; honor num_frames attr if present.
26
+ num_frames_attr = f.attrs.get("num_frames")
27
+ if isinstance(num_frames_attr, (int, np.integer)) and 0 < num_frames_attr <= dset.shape[0]:
28
+ arr = dset[: int(num_frames_attr)]
29
+ else:
30
+ arr = dset[:]
31
+
32
+ arr = np.asarray(arr, dtype=np.float64)
33
+ if arr.ndim != 1:
34
+ raise ValueError(f"Expected 1D dataset {dataset!r}, got shape {arr.shape} (file: {h5_path})")
35
+ # Guard against preallocated-but-unwritten zeros (should never happen with time.time()*1000).
36
+ mask = arr > 0
37
+ return arr[mask]
38
+
39
+
40
+ def load_camera_timestamps_h5(camera_h5_path: str) -> np.ndarray:
41
+ """
42
+ Load camera timestamps from HDF5 and remove the last one.
43
+
44
+ This ensures the number of timestamps is always safely within the SVO frame count,
45
+ avoiding off-by-one errors that can occur with SVO files.
46
+
47
+ Expected dataset: 'timestamps_ms' (milliseconds since Unix epoch).
48
+ Returns: timestamps in milliseconds, shape (N-1,)
49
+ """
50
+ timestamps = _load_h5_dataset_1d(camera_h5_path, "timestamps_ms")
51
+
52
+ # Always remove the last timestamp to be safe
53
+ if len(timestamps) > 0:
54
+ timestamps = timestamps[:-1]
55
+
56
+ return timestamps
57
+
58
+
59
+ def load_radar_timestamps_h5(radar_h5_path: str) -> np.ndarray:
60
+ """
61
+ Load radar timestamps from `src/radarRecorder.py` output HDF5.
62
+
63
+ Expected dataset: 'timestamps_ms' (milliseconds since Unix epoch).
64
+ """
65
+ return _load_h5_dataset_1d(radar_h5_path, "timestamps_ms")
66
+
67
+
68
+ def load_dji_timestamps_h5(dji_h5_path: str) -> np.ndarray:
69
+ """
70
+ Load DJI timestamps from `src/djiRecorder.py` output HDF5.
71
+
72
+ Expected dataset: 'timestamps_ms' (milliseconds since Unix epoch).
73
+ """
74
+ return _load_h5_dataset_1d(dji_h5_path, "timestamps_ms")
75
+
76
+
77
+ @dataclass(frozen=True)
78
+ class SyncResult:
79
+ """
80
+ Output of 2-way timestamp synchronization (camera + radar).
81
+
82
+ - `pairs`: list of (camera_frame_idx, radar_frame_idx)
83
+ - `diffs_ms`: signed difference in ms for each pair: camera_ts - radar_ts
84
+ """
85
+
86
+ pairs: List[Tuple[int, int]]
87
+ diffs_ms: np.ndarray
88
+ camera_count: int
89
+ radar_count: int
90
+ tolerance_ms: float
91
+
92
+
93
+ @dataclass(frozen=True)
94
+ class SyncResult3Way:
95
+ """
96
+ Output of 3-way timestamp synchronization (radar + ZED depth + DJI RGB).
97
+
98
+ - `triples`: list of (radar_frame_idx, zed_frame_idx, dji_frame_idx)
99
+ - `diffs_radar_zed_ms`: signed difference radar_ts - zed_ts
100
+ - `diffs_radar_dji_ms`: signed difference radar_ts - dji_ts
101
+ """
102
+
103
+ triples: List[Tuple[int, int, int]]
104
+ diffs_radar_zed_ms: np.ndarray
105
+ diffs_radar_dji_ms: np.ndarray
106
+ radar_count: int
107
+ zed_count: int
108
+ dji_count: int
109
+ tolerance_ms: float
110
+
111
+
112
+ def save_sync_csv(out_csv_path: str, result: Union[SyncResult, SyncResult3Way]) -> None:
113
+ """
114
+ Save sync pairs/triples to CSV.
115
+
116
+ For SyncResult (2-way):
117
+ camera_frame_idx,radar_frame_idx,diff_ms
118
+
119
+ For SyncResult3Way (3-way):
120
+ radar_frame_idx,zed_frame_idx,dji_frame_idx,diff_radar_zed_ms,diff_radar_dji_ms
121
+ """
122
+ os.makedirs(os.path.dirname(out_csv_path) or ".", exist_ok=True)
123
+
124
+ if isinstance(result, SyncResult3Way):
125
+ # 3-way sync
126
+ radar_idx = np.array([t[0] for t in result.triples], dtype=np.int64)
127
+ zed_idx = np.array([t[1] for t in result.triples], dtype=np.int64)
128
+ dji_idx = np.array([t[2] for t in result.triples], dtype=np.int64)
129
+ arr = np.column_stack([
130
+ radar_idx,
131
+ zed_idx,
132
+ dji_idx,
133
+ result.diffs_radar_zed_ms.astype(np.float64, copy=False),
134
+ result.diffs_radar_dji_ms.astype(np.float64, copy=False)
135
+ ])
136
+ header = "radar_frame_idx,zed_frame_idx,dji_frame_idx,diff_radar_zed_ms,diff_radar_dji_ms"
137
+ fmt = ["%d", "%d", "%d", "%.6f", "%.6f"]
138
+ else:
139
+ # 2-way sync (backward compatibility)
140
+ cam_idx = np.array([p[0] for p in result.pairs], dtype=np.int64)
141
+ rad_idx = np.array([p[1] for p in result.pairs], dtype=np.int64)
142
+ arr = np.column_stack([cam_idx, rad_idx, result.diffs_ms.astype(np.float64, copy=False)])
143
+ header = "camera_frame_idx,radar_frame_idx,diff_ms"
144
+ fmt = ["%d", "%d", "%.6f"]
145
+
146
+ np.savetxt(out_csv_path, arr, fmt=fmt, delimiter=",", header=header, comments="")
147
+
148
+
149
+ def _pick_latest_file(directory: str, pattern: str) -> str:
150
+ """
151
+ Pick the latest file (by lexicographic sort) matching a pattern in a directory.
152
+
153
+ This works for our timestamped filenames like:
154
+ - camera_timestamps_YYYYmmdd_HHMMSS.h5
155
+ - radar_YYYYmmdd_HHMMSS.h5
156
+ """
157
+ matches = glob.glob(os.path.join(directory, pattern))
158
+ if not matches:
159
+ raise FileNotFoundError(f"No files matching {pattern!r} in directory: {directory}")
160
+ matches.sort()
161
+ return matches[-1]
162
+
163
+
164
+ def _pick_latest_file_multi_ext(directory: str, patterns: list[str]) -> str:
165
+ """
166
+ Pick the latest file matching any of multiple patterns.
167
+
168
+ Useful for finding files with different extensions (e.g., .mkv or .mp4).
169
+
170
+ Example:
171
+ path = _pick_latest_file_multi_ext("data", ["dji_*.mkv", "dji_*.mp4"])
172
+ """
173
+ all_matches = []
174
+ for pattern in patterns:
175
+ matches = glob.glob(os.path.join(directory, pattern))
176
+ all_matches.extend(matches)
177
+
178
+ if not all_matches:
179
+ patterns_str = " or ".join(patterns)
180
+ raise FileNotFoundError(f"No files matching {patterns_str} in directory: {directory}")
181
+
182
+ all_matches.sort()
183
+ return all_matches[-1]
184
+
185
+
186
+ def cli(
187
+ directory: Optional[str] = None,
188
+ camera_timestamps_h5: Optional[str] = None,
189
+ radar_h5: Optional[str] = None,
190
+ svo_path: Optional[str] = None,
191
+ out_csv: str = os.path.join("data", "sync_pairs.csv"),
192
+ tolerance_ms: float = 50.0,
193
+ enforce_one_to_one: bool = True,
194
+ ) -> None:
195
+ """
196
+ CLI wrapper for timestamp synchronization.
197
+
198
+ Usage patterns:
199
+
200
+ 1) Directory mode (auto-pick latest files):
201
+ - Provide `directory` and omit `camera_timestamps_h5` / `radar_h5` / `svo_path`.
202
+
203
+ 2) File mode (explicit paths):
204
+ - Provide BOTH `camera_timestamps_h5` and `radar_h5`, optionally `svo_path`.
205
+ """
206
+ if directory is not None:
207
+ if camera_timestamps_h5 is not None or radar_h5 is not None or svo_path is not None:
208
+ raise ValueError("If 'directory' is provided, do not also pass explicit file paths.")
209
+ camera_timestamps_h5 = _pick_latest_file(directory, "camera_timestamps_*.h5")
210
+ radar_h5 = _pick_latest_file(directory, "radar_*.h5")
211
+ svo_path = _pick_latest_file(directory, "zed_*.svo2")
212
+ log.info(f"Auto-picked camera timestamps: {camera_timestamps_h5}")
213
+ log.info(f"Auto-picked radar file: {radar_h5}")
214
+ log.info(f"Auto-picked SVO: {svo_path}")
215
+
216
+ if camera_timestamps_h5 is None or radar_h5 is None:
217
+ raise ValueError(
218
+ "Provide either:\n"
219
+ "- directory=<folder containing camera_timestamps_*.h5 and radar_*.h5>, OR\n"
220
+ "- camera_timestamps_h5=<path> AND radar_h5=<path>."
221
+ )
222
+
223
+ result = synchronize_timestamps(
224
+ camera_timestamps_h5=camera_timestamps_h5,
225
+ radar_h5=radar_h5,
226
+ tolerance_ms=tolerance_ms,
227
+ enforce_one_to_one=enforce_one_to_one,
228
+ svo_path=svo_path,
229
+ )
230
+ save_sync_csv(out_csv, result)
231
+ log.info(f"Wrote sync CSV: {out_csv}")
232
+
233
+ def _nearest_unused_camera_index(
234
+ cam_ts: np.ndarray,
235
+ target_t: float,
236
+ used_camera: set[int],
237
+ start_idx: int,
238
+ ) -> Optional[int]:
239
+ """
240
+ Find nearest unused camera index to `target_t`.
241
+
242
+ `start_idx` is the insertion index from `np.searchsorted(cam_ts, target_t)`.
243
+ We expand outward until we find an unused camera frame.
244
+ """
245
+ left = start_idx - 1
246
+ right = start_idx
247
+ while left >= 0 or right < len(cam_ts):
248
+ cand_left = left if left >= 0 else None
249
+ cand_right = right if right < len(cam_ts) else None
250
+
251
+ if cand_left is None and cand_right is None:
252
+ return None
253
+
254
+ best: Optional[int] = None
255
+ best_abs = float("inf")
256
+
257
+ for cand in (cand_left, cand_right):
258
+ if cand is None:
259
+ continue
260
+ if cand in used_camera:
261
+ continue
262
+ abs_diff = abs(float(cam_ts[cand] - target_t))
263
+ if abs_diff < best_abs:
264
+ best_abs = abs_diff
265
+ best = int(cand)
266
+
267
+ if best is not None:
268
+ return best
269
+
270
+ left -= 1
271
+ right += 1
272
+
273
+ return None
274
+
275
+
276
+ def synchronize_timestamps(
277
+ camera_timestamps_h5: str,
278
+ radar_h5: str,
279
+ tolerance_ms: float = 50.0,
280
+ enforce_one_to_one: bool = True,
281
+ strategy: Literal["nearest"] = "nearest",
282
+ svo_path: Optional[str] = None,
283
+ ) -> SyncResult:
284
+ """
285
+ Synchronize camera and radar timestamps.
286
+
287
+ Assumptions (true for the new recorders):
288
+ - Both timestamp streams are in **milliseconds since Unix epoch** (from `time.time()*1000`).
289
+ - Each stream is **monotonically increasing**.
290
+
291
+ Parameters:
292
+ - svo_path: Optional path to SVO2 file. If provided, validates that camera timestamps
293
+ don't exceed the actual number of frames in the SVO.
294
+
295
+ Returns pairs and per-pair signed diffs: Δt = t_cam - t_radar.
296
+ """
297
+ if strategy != "nearest":
298
+ raise ValueError(f"Unsupported strategy: {strategy!r}")
299
+
300
+ cam_ts = load_camera_timestamps_h5(camera_timestamps_h5)
301
+ rad_ts = load_radar_timestamps_h5(radar_h5)
302
+
303
+ log.info(f"Camera timestamps: {len(cam_ts)} (last timestamp already removed for SVO safety)")
304
+
305
+ # Ensure float for arithmetic (HDF5 may store float64 already, but keep consistent)
306
+ cam_ts = cam_ts.astype(np.float64, copy=False)
307
+ rad_ts = rad_ts.astype(np.float64, copy=False)
308
+
309
+ # Reverse logic: iterate radar frames and pick nearest camera frame.
310
+ # Goal: keep (as many as possible) radar frames, since radar is the lower FPS stream.
311
+ pairs: List[Tuple[int, int]] = []
312
+ diffs: List[float] = []
313
+ used_camera: set[int] = set()
314
+
315
+ for rad_idx, r_t in enumerate(rad_ts):
316
+ insert_idx = int(np.searchsorted(cam_ts, r_t))
317
+
318
+ if enforce_one_to_one:
319
+ cam_idx = _nearest_unused_camera_index(cam_ts, float(r_t), used_camera, insert_idx)
320
+ else:
321
+ # Nearest of the two immediate neighbors (can reuse camera frames).
322
+ cand0 = insert_idx - 1 if insert_idx > 0 else None
323
+ cand1 = insert_idx if insert_idx < len(cam_ts) else None
324
+ best: Optional[int] = None
325
+ best_abs = float("inf")
326
+ for cand in (cand0, cand1):
327
+ if cand is None:
328
+ continue
329
+ abs_diff = abs(float(cam_ts[cand] - r_t))
330
+ if abs_diff < best_abs:
331
+ best_abs = abs_diff
332
+ best = int(cand)
333
+ cam_idx = best
334
+
335
+ if cam_idx is None:
336
+ # No camera frames at all (or no unused ones left).
337
+ break
338
+
339
+ signed = float(cam_ts[cam_idx] - r_t)
340
+ abs_diff = abs(signed)
341
+
342
+ if abs_diff > tolerance_ms:
343
+ continue
344
+
345
+ pairs.append((int(cam_idx), int(rad_idx)))
346
+ diffs.append(signed)
347
+ if enforce_one_to_one:
348
+ used_camera.add(int(cam_idx))
349
+
350
+ diffs_ms = np.array(diffs, dtype=np.float64)
351
+ log.info(
352
+ f"Synchronized {len(pairs)} pairs | "
353
+ f"camera={len(cam_ts)} radar={len(rad_ts)} | tol={tolerance_ms}ms | "
354
+ f"one_to_one={enforce_one_to_one}"
355
+ )
356
+ return SyncResult(
357
+ pairs=pairs,
358
+ diffs_ms=diffs_ms,
359
+ camera_count=int(len(cam_ts)),
360
+ radar_count=int(len(rad_ts)),
361
+ tolerance_ms=float(tolerance_ms),
362
+ )
363
+
364
+ if __name__ == "__main__":
365
+ tyro.cli(cli)
366
+
367
+
368
+ def synchronize_timestamps_3way(
369
+ radar_h5: str,
370
+ zed_timestamps_h5: str,
371
+ dji_timestamps_h5: str,
372
+ tolerance_ms: float = 50.0,
373
+ enforce_one_to_one: bool = True,
374
+ svo_path: Optional[str] = None,
375
+ dji_video_path: Optional[str] = None,
376
+ ) -> SyncResult3Way:
377
+ """
378
+ Synchronize 3 timestamp streams: radar (reference), ZED depth, DJI RGB.
379
+
380
+ Strategy:
381
+ - Radar is the lowest FPS stream (typically ~10 Hz), so we use it as the reference.
382
+ - For each radar frame, find the nearest ZED frame and nearest DJI frame.
383
+ - Both must be within tolerance_ms of the radar timestamp.
384
+
385
+ Parameters:
386
+ - radar_h5: Path to radar HDF5 file with timestamps_ms
387
+ - zed_timestamps_h5: Path to ZED camera timestamps HDF5
388
+ - dji_timestamps_h5: Path to DJI timestamps HDF5
389
+ - tolerance_ms: Maximum time difference in milliseconds
390
+ - enforce_one_to_one: If True, each ZED/DJI frame can only be used once
391
+ - svo_path: Optional path to SVO2 file for frame count validation
392
+ - dji_video_path: Optional path to DJI video for frame count validation
393
+
394
+ Returns:
395
+ - SyncResult3Way with triples (radar_idx, zed_idx, dji_idx)
396
+ """
397
+ # Load all timestamps
398
+ radar_ts = load_radar_timestamps_h5(radar_h5)
399
+ zed_ts = load_camera_timestamps_h5(zed_timestamps_h5)
400
+ dji_ts = load_dji_timestamps_h5(dji_timestamps_h5)
401
+
402
+ log.info(f"ZED timestamps: {len(zed_ts)} (last timestamp already removed for SVO safety)")
403
+
404
+ # Ensure float64 for arithmetic
405
+ radar_ts = radar_ts.astype(np.float64, copy=False)
406
+ zed_ts = zed_ts.astype(np.float64, copy=False)
407
+ dji_ts = dji_ts.astype(np.float64, copy=False)
408
+
409
+ log.info(f"Timestamp ranges:")
410
+ log.info(f" Radar: {len(radar_ts)} frames, {radar_ts[0]:.2f} - {radar_ts[-1]:.2f} ms")
411
+ log.info(f" ZED: {len(zed_ts)} frames, {zed_ts[0]:.2f} - {zed_ts[-1]:.2f} ms")
412
+ log.info(f" DJI: {len(dji_ts)} frames, {dji_ts[0]:.2f} - {dji_ts[-1]:.2f} ms")
413
+
414
+ # Iterate through radar frames (lowest FPS, reference stream)
415
+ triples = []
416
+ diffs_radar_zed = []
417
+ diffs_radar_dji = []
418
+ used_zed = set()
419
+ used_dji = set()
420
+
421
+ for radar_idx, r_t in enumerate(radar_ts):
422
+ # Find nearest ZED frame
423
+ zed_insert_idx = int(np.searchsorted(zed_ts, r_t))
424
+ if enforce_one_to_one:
425
+ zed_idx = _nearest_unused_camera_index(zed_ts, float(r_t), used_zed, zed_insert_idx)
426
+ else:
427
+ cand0 = zed_insert_idx - 1 if zed_insert_idx > 0 else None
428
+ cand1 = zed_insert_idx if zed_insert_idx < len(zed_ts) else None
429
+ zed_idx = None
430
+ best_abs = float("inf")
431
+ for cand in (cand0, cand1):
432
+ if cand is None:
433
+ continue
434
+ abs_diff = abs(float(zed_ts[cand] - r_t))
435
+ if abs_diff < best_abs:
436
+ best_abs = abs_diff
437
+ zed_idx = int(cand)
438
+
439
+ if zed_idx is None:
440
+ continue
441
+
442
+ zed_diff = float(r_t - zed_ts[zed_idx])
443
+ if abs(zed_diff) > tolerance_ms:
444
+ continue
445
+
446
+ # Find nearest DJI frame
447
+ dji_insert_idx = int(np.searchsorted(dji_ts, r_t))
448
+ if enforce_one_to_one:
449
+ dji_idx = _nearest_unused_camera_index(dji_ts, float(r_t), used_dji, dji_insert_idx)
450
+ else:
451
+ cand0 = dji_insert_idx - 1 if dji_insert_idx > 0 else None
452
+ cand1 = dji_insert_idx if dji_insert_idx < len(dji_ts) else None
453
+ dji_idx = None
454
+ best_abs = float("inf")
455
+ for cand in (cand0, cand1):
456
+ if cand is None:
457
+ continue
458
+ abs_diff = abs(float(dji_ts[cand] - r_t))
459
+ if abs_diff < best_abs:
460
+ best_abs = abs_diff
461
+ dji_idx = int(cand)
462
+
463
+ if dji_idx is None:
464
+ continue
465
+
466
+ dji_diff = float(r_t - dji_ts[dji_idx])
467
+ if abs(dji_diff) > tolerance_ms:
468
+ continue
469
+
470
+ # Both ZED and DJI within tolerance - add triple
471
+ triples.append((int(radar_idx), int(zed_idx), int(dji_idx)))
472
+ diffs_radar_zed.append(zed_diff)
473
+ diffs_radar_dji.append(dji_diff)
474
+
475
+ if enforce_one_to_one:
476
+ used_zed.add(int(zed_idx))
477
+ used_dji.add(int(dji_idx))
478
+
479
+ diffs_radar_zed_ms = np.array(diffs_radar_zed, dtype=np.float64)
480
+ diffs_radar_dji_ms = np.array(diffs_radar_dji, dtype=np.float64)
481
+
482
+ log.info(
483
+ f"Synchronized {len(triples)} triples | "
484
+ f"radar={len(radar_ts)} zed={len(zed_ts)} dji={len(dji_ts)} | "
485
+ f"tol={tolerance_ms}ms | one_to_one={enforce_one_to_one}"
486
+ )
487
+
488
+ return SyncResult3Way(
489
+ triples=triples,
490
+ diffs_radar_zed_ms=diffs_radar_zed_ms,
491
+ diffs_radar_dji_ms=diffs_radar_dji_ms,
492
+ radar_count=int(len(radar_ts)),
493
+ zed_count=int(len(zed_ts)),
494
+ dji_count=int(len(dji_ts)),
495
+ tolerance_ms=float(tolerance_ms),
496
+ )