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https://huggingface.co/datasets/sabertoaster/flow-matching-1/resolve/main/src/evaluate.py
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6.22 kB
| import numpy as np | |
| import torch | |
| import torch.nn as nn | |
| from timm.utils import AverageMeter | |
| from torch.utils.data import DataLoader | |
| from .metric import pearsonr_score | |
| from .submission_utils import EXPECTED_SUBJECTS, EXPECTED_OOD_KEYS | |
| def evaluate_stage1( | |
| *, | |
| epoch: int, | |
| model: torch.nn.Module, | |
| val_loader: DataLoader, | |
| device: torch.device, | |
| subjects: list, | |
| ds_name: str = "val", | |
| ): | |
| model.eval() | |
| loss_m = AverageMeter() | |
| samples = [] | |
| outputs = [] | |
| for batch_idx, batch in enumerate(val_loader): | |
| feats = [f.to(device) for f in batch["features"]] | |
| fmri = batch["fmri"].to(device) | |
| batch_size = fmri.size(0) | |
| pred, _ = model(feats) | |
| loss = nn.MSELoss()(pred, fmri) | |
| loss_m.update(loss.item(), batch_size) | |
| N, S, L, C = fmri.shape | |
| assert N, S == (1, 4) | |
| outputs.append(pred.cpu().numpy().swapaxes(0, 1).reshape((S, N * L, C))) | |
| samples.append(fmri.cpu().numpy().swapaxes(0, 1).reshape((S, N * L, C))) | |
| outputs = np.concatenate(outputs, axis=1) | |
| samples = np.concatenate(samples, axis=1) | |
| metrics = {} | |
| dim = samples.shape[-1] | |
| acc = 0.0 | |
| acc_map = np.zeros(dim) | |
| for ii, sub in enumerate(subjects): | |
| y_true = samples[ii].reshape(-1, dim) | |
| y_pred = outputs[ii].reshape(-1, dim) | |
| metrics[f"accmap_sub-{sub}"] = acc_map_i = pearsonr_score(y_true, y_pred) | |
| metrics[f"acc_sub-{sub}"] = acc_i = np.mean(acc_map_i) | |
| acc_map += acc_map_i / len(subjects) | |
| acc += acc_i / len(subjects) | |
| metrics["accmap_avg"] = acc_map | |
| metrics["acc_avg"] = acc | |
| accs_fmt = ",".join( | |
| f"{val:.3f}" for key, val in metrics.items() if key.startswith("acc_sub-") | |
| ) | |
| print( | |
| f"Evaluate Stage 1 ({ds_name}): {epoch:>3d}" | |
| f" Loss: {loss_m.avg:#.3g}" | |
| f" Acc: {accs_fmt} ({acc:.3f})" | |
| ) | |
| return acc, metrics | |
| def evaluate_stage2( | |
| *, | |
| epoch: int, | |
| stage1_model: torch.nn.Module, | |
| stage2_models: nn.ModuleDict, | |
| val_loader: DataLoader, | |
| device: torch.device, | |
| subjects: list, | |
| ds_name: str = "val", | |
| n_timesteps: int = 10, | |
| ): | |
| stage1_model.eval() | |
| for model in stage2_models.values(): | |
| model.eval() | |
| samples = [] | |
| outputs = [] | |
| for batch in val_loader: | |
| feats = [f.to(device) for f in batch["features"]] | |
| fmri = batch["fmri"].to(device) | |
| mu_anchor, embed_anchor = stage1_model(feats) | |
| batch_preds = [] | |
| for i, sub in enumerate(subjects): | |
| sub_key = str(sub) | |
| cfm = stage2_models[sub_key] | |
| src_cond = mu_anchor[:, i].transpose(1, 2) | |
| mu_fusion = embed_anchor.transpose(1, 2) | |
| pred = cfm(src_cond, mu_fusion, n_timesteps=n_timesteps) | |
| pred = pred.transpose(1, 2).unsqueeze(1) | |
| batch_preds.append(pred) | |
| pred_combined = torch.cat(batch_preds, dim=1) | |
| N, S, L, C = fmri.shape | |
| assert N, S == (1, 4) | |
| outputs.append( | |
| pred_combined.cpu().numpy().swapaxes(0, 1).reshape((S, N * L, C)) | |
| ) | |
| samples.append(fmri.cpu().numpy().swapaxes(0, 1).reshape((S, N * L, C))) | |
| outputs = np.concatenate(outputs, axis=1) | |
| samples = np.concatenate(samples, axis=1) | |
| metrics = {} | |
| dim = samples.shape[-1] | |
| acc = 0.0 | |
| acc_map = np.zeros(dim) | |
| for ii, sub in enumerate(subjects): | |
| y_true = samples[ii].reshape(-1, dim) | |
| y_pred = outputs[ii].reshape(-1, dim) | |
| metrics[f"accmap_sub-{sub}"] = acc_map_i = pearsonr_score(y_true, y_pred) | |
| metrics[f"acc_sub-{sub}"] = acc_i = np.mean(acc_map_i) | |
| acc_map += acc_map_i / len(subjects) | |
| acc += acc_i / len(subjects) | |
| metrics["accmap_avg"] = acc_map | |
| metrics["acc_avg"] = acc | |
| accs_fmt = ",".join( | |
| f"{val:.3f}" for key, val in metrics.items() if key.startswith("acc_sub-") | |
| ) | |
| print(f"Evaluate Stage 2 ({ds_name}): {epoch:>3d}" f" Acc: {accs_fmt} ({acc:.3f})") | |
| return acc, metrics | |
| def validate_submission( | |
| predictions: dict[str, dict[str, np.ndarray]], | |
| test_set_name: str, | |
| fmri_num_samples: dict[str, dict[str, int]], | |
| ): | |
| subject_keys = set(predictions.keys()) | |
| if subject_keys != EXPECTED_SUBJECTS: | |
| extra = subject_keys - EXPECTED_SUBJECTS | |
| missing = EXPECTED_SUBJECTS - subject_keys | |
| raise ValueError( | |
| f"Subject key mismatch. Extra: {extra}, Missing: {missing}. " | |
| f"Expected exactly: {EXPECTED_SUBJECTS}" | |
| ) | |
| if test_set_name == "ood": | |
| expected_episodes = EXPECTED_OOD_KEYS | |
| elif test_set_name == "friends-s7": | |
| all_episodes = set() | |
| for sub_samples in fmri_num_samples.values(): | |
| all_episodes.update(sub_samples.keys()) | |
| expected_episodes = all_episodes | |
| else: | |
| print(f" Warning: no key validation for test set '{test_set_name}'") | |
| return | |
| for sub, episodes_dict in predictions.items(): | |
| episode_keys = set(episodes_dict.keys()) | |
| extra = episode_keys - expected_episodes | |
| missing = expected_episodes - episode_keys | |
| if extra: | |
| raise ValueError( | |
| f"{sub}: extra episode keys {extra} — these will cause a formatting error" | |
| ) | |
| if missing: | |
| raise ValueError( | |
| f"{sub}: missing episode keys {missing} — submission is incomplete" | |
| ) | |
| for ep, pred in episodes_dict.items(): | |
| expected_n = fmri_num_samples[sub].get(ep) | |
| if expected_n is not None and pred.shape[0] != expected_n: | |
| raise ValueError( | |
| f"{sub}/{ep}: shape {pred.shape} but expected N={expected_n}" | |
| ) | |
| if pred.shape[1] != 1000: | |
| raise ValueError( | |
| f"{sub}/{ep}: shape {pred.shape} but expected 1000 parcels" | |
| ) | |
| if pred.dtype != np.float32: | |
| raise ValueError( | |
| f"{sub}/{ep}: dtype {pred.dtype} but expected float32" | |
| ) | |
| print(f" Validation passed: {len(predictions)} subjects, " | |
| f"{len(expected_episodes)} episodes each") | |