Download project/grasp_box/submodules/SAM6D/utils/data_utils.py from savoji/AnyBox: direct link, hf CLI and curl.
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https://huggingface.co/datasets/savoji/AnyBox/resolve/main/project/grasp_box/submodules/SAM6D/utils/data_utils.py
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7.71 kB
| import os | |
| import numpy as np | |
| import json | |
| import imageio | |
| import cv2 | |
| import open3d as o3d | |
| from PIL import Image | |
| def trimesh_to_open3d(tri_mesh): | |
| # Create the open3d TriangleMesh object from numpy arrays | |
| o3d_mesh = o3d.geometry.TriangleMesh( | |
| vertices=o3d.utility.Vector3dVector(tri_mesh.vertices.copy()), | |
| triangles=o3d.utility.Vector3iVector(tri_mesh.faces.copy()) | |
| ) | |
| # Check if vertex colors are present in the trimesh object | |
| if hasattr(tri_mesh, 'visual'): | |
| if hasattr(tri_mesh.visual, 'vertex_colors'): | |
| # Convert the trimesh vertex colors to a format open3d understands | |
| vertex_colors = tri_mesh.visual.vertex_colors[:, :3] / 255.0 | |
| else: | |
| vertex_colors = tri_mesh.visual.to_color().vertex_colors[:, :3] / 255.0 | |
| o3d_mesh.vertex_colors = o3d.utility.Vector3dVector(vertex_colors) | |
| return o3d_mesh | |
| def load_im(path): | |
| """Loads an image from a file. | |
| :param path: Path to the image file to load. | |
| :return: ndarray with the loaded image. | |
| """ | |
| im = imageio.imread(path) | |
| return im | |
| def io_load_gt( | |
| gt_file, | |
| instance_ids=None, | |
| ): | |
| """Load ground truth from an I/O object. | |
| Instance_ids can be specified to load only a | |
| subset of object instances. | |
| :param gt_file: I/O object that can be read with json.load. | |
| :param instance_ids: List of instance ids. | |
| :return: List of ground truth annotations (one dict per object instance). | |
| """ | |
| gt = json.load(gt_file) | |
| if instance_ids is not None: | |
| gt = [gt_n for n, gt_n in enumerate(gt) if n in instance_ids] | |
| gt = [_gt_as_numpy(gt_n) for gt_n in gt] | |
| return gt | |
| def io_load_masks( | |
| mask_file, | |
| instance_ids=None | |
| ): | |
| """Load object masks from an I/O object. | |
| Instance_ids can be specified to apply RLE | |
| decoding to a subset of object instances contained | |
| in the file. | |
| :param mask_file: I/O object that can be read with json.load. | |
| :param masks_path: Path to json file. | |
| :return: a [N,H,W] binary array containing object masks. | |
| """ | |
| masks_rle = json.load(mask_file) | |
| masks_rle = {int(k): v for k, v in masks_rle.items()} | |
| if instance_ids is None: | |
| instance_ids = masks_rle.keys() | |
| instance_ids = sorted(instance_ids) | |
| masks = np.stack([ | |
| rle_to_binary_mask(masks_rle[instance_id]) | |
| for instance_id in instance_ids]) | |
| return masks | |
| def _gt_as_numpy(gt): | |
| if 'cam_R_m2c' in gt.keys(): | |
| gt['cam_R_m2c'] = \ | |
| np.array(gt['cam_R_m2c'], np.float64).reshape((3, 3)) | |
| if 'cam_t_m2c' in gt.keys(): | |
| gt['cam_t_m2c'] = \ | |
| np.array(gt['cam_t_m2c'], np.float64).reshape((3, 1)) | |
| return gt | |
| def rle_to_binary_mask(rle): | |
| """Converts a COCOs run-length encoding (RLE) to binary mask. | |
| :param rle: Mask in RLE format | |
| :return: a 2D binary numpy array where '1's represent the object | |
| """ | |
| binary_array = np.zeros(np.prod(rle.get('size')), dtype=bool) | |
| counts = rle.get('counts') | |
| start = 0 | |
| for i in range(len(counts)-1): | |
| start += counts[i] | |
| end = start + counts[i+1] | |
| binary_array[start:end] = (i + 1) % 2 | |
| binary_mask = binary_array.reshape(*rle.get('size'), order='F') | |
| return binary_mask | |
| def get_point_cloud_from_depth(depth, K, bbox=None): | |
| cam_fx, cam_fy, cam_cx, cam_cy = K[0,0], K[1,1], K[0,2], K[1,2] | |
| im_H, im_W = depth.shape | |
| xmap = np.array([[i for i in range(im_W)] for j in range(im_H)]) | |
| ymap = np.array([[j for i in range(im_W)] for j in range(im_H)]) | |
| if bbox is not None: | |
| rmin, rmax, cmin, cmax = bbox | |
| depth = depth[rmin:rmax, cmin:cmax].astype(np.float32) | |
| xmap = xmap[rmin:rmax, cmin:cmax].astype(np.float32) | |
| ymap = ymap[rmin:rmax, cmin:cmax].astype(np.float32) | |
| pt2 = depth.astype(np.float32) | |
| pt0 = (xmap.astype(np.float32) - cam_cx) * pt2 / cam_fx | |
| pt1 = (ymap.astype(np.float32) - cam_cy) * pt2 / cam_fy | |
| cloud = np.stack([pt0,pt1,pt2]).transpose((1,2,0)) | |
| return cloud | |
| def get_resize_rgb_choose(choose, bbox, img_size): | |
| rmin, rmax, cmin, cmax = bbox | |
| crop_h = rmax - rmin | |
| ratio_h = img_size / crop_h | |
| crop_w = cmax - cmin | |
| ratio_w = img_size / crop_w | |
| row_idx = choose // crop_w | |
| col_idx = choose % crop_w | |
| choose = (np.floor(row_idx * ratio_h) * img_size + np.floor(col_idx * ratio_w)).astype(np.int64) | |
| return choose | |
| def get_bbox(label): | |
| img_width, img_length = label.shape | |
| rows = np.any(label, axis=1) | |
| cols = np.any(label, axis=0) | |
| rmin, rmax = np.where(rows)[0][[0, -1]] | |
| cmin, cmax = np.where(cols)[0][[0, -1]] | |
| rmax += 1 | |
| cmax += 1 | |
| r_b = rmax - rmin | |
| c_b = cmax - cmin | |
| b = min(max(r_b, c_b), min(img_width, img_length)) | |
| center = [int((rmin + rmax) / 2), int((cmin + cmax) / 2)] | |
| rmin = center[0] - int(b / 2) | |
| rmax = center[0] + int(b / 2) | |
| cmin = center[1] - int(b / 2) | |
| cmax = center[1] + int(b / 2) | |
| if rmin < 0: | |
| delt = -rmin | |
| rmin = 0 | |
| rmax += delt | |
| if cmin < 0: | |
| delt = -cmin | |
| cmin = 0 | |
| cmax += delt | |
| if rmax > img_width: | |
| delt = rmax - img_width | |
| rmax = img_width | |
| rmin -= delt | |
| if cmax > img_length: | |
| delt = cmax - img_length | |
| cmax = img_length | |
| cmin -= delt | |
| return [rmin, rmax, cmin, cmax] | |
| def get_random_rotation(): | |
| angles = np.random.rand(3) * 2 * np.pi | |
| rand_rotation = np.array([ | |
| [1,0,0], | |
| [0,np.cos(angles[0]),-np.sin(angles[0])], | |
| [0,np.sin(angles[0]), np.cos(angles[0])] | |
| ]) @ np.array([ | |
| [np.cos(angles[1]),0,np.sin(angles[1])], | |
| [0,1,0], | |
| [-np.sin(angles[1]), 0, np.cos(angles[1])] | |
| ]) @ np.array([ | |
| [np.cos(angles[2]),-np.sin(angles[2]),0], | |
| [np.sin(angles[2]), np.cos(angles[2]),0], | |
| [0,0,1] | |
| ]) | |
| return rand_rotation | |
| def get_model_info(obj, return_color=False, sample_num=2048): | |
| if return_color: | |
| model_points, model_color, symmetry_flag = obj.get_item(return_color, sample_num) | |
| return (model_points, model_color, symmetry_flag) | |
| else: | |
| model_points, symmetry_flag = obj.get_item() | |
| return (model_points, symmetry_flag) | |
| def get_bop_depth_map(inst): | |
| scene_id, img_id, data_folder = inst['scene_id'], inst['img_id'], inst['data_folder'] | |
| try: | |
| depth = np.array(Image.open(os.path.join(data_folder, f'{scene_id:06d}', 'depth', f'{img_id:06d}.png'))) / 1000.0 | |
| except: | |
| depth = np.array(Image.open(os.path.join(data_folder, f'{scene_id:06d}', 'depth', f'{img_id:06d}.tif'))) / 1000.0 | |
| return depth | |
| def get_bop_image(inst, bbox, img_size, mask=None): | |
| scene_id, img_id, data_folder = inst['scene_id'], inst['img_id'], inst['data_folder'] | |
| rmin, rmax, cmin, cmax = bbox | |
| img_path = os.path.join(data_folder, f'{scene_id:06d}/') | |
| strs = [f'rgb/{img_id:06d}.jpg', f'rgb/{img_id:06d}.png', f'gray/{img_id:06d}.tif'] | |
| for s in strs: | |
| if os.path.exists(os.path.join(img_path,s)): | |
| img_path = os.path.join(img_path,s) | |
| break | |
| rgb = load_im(img_path).astype(np.uint8) | |
| if len(rgb.shape)==2: | |
| rgb = np.concatenate([rgb[:,:,None], rgb[:,:,None], rgb[:,:,None]], axis=2) | |
| rgb = rgb[..., ::-1][rmin:rmax, cmin:cmax, :3] | |
| if mask is not None: | |
| rgb = rgb * (mask[:,:,None]>0).astype(np.uint8) | |
| rgb = cv2.resize(rgb, (img_size, img_size), interpolation=cv2.INTER_LINEAR) | |
| return rgb | |