Upload outputs/runs/single_085_090_human_only_20260306_032339/subset090/reports/validation/gnn_structlite_validation_subset090/meta_enrichment_results.csv with huggingface_hub

outputs/runs/single_085_090_human_only_20260306_032339/subset090/reports/validation/gnn_structlite_validation_subset090/meta_enrichment_results.csv

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+seed,attr_type,cluster,value,N_total,n_cluster,g_global,a_overlap,p_value,q_value,enrichment_ratio
+11,mesh,0,"Cell Line, Tumor",1626,221,205,50,5.245961918512395e-06,0.0007567570102706908,1.7945039178898574
+11,mesh,0,"Promoter Regions, Genetic",1626,221,47,17,6.333581213037371e-05,0.0035126113731950544,2.6612111292962357
+11,mesh,0,Transcription Factors,1626,221,134,33,0.00023212791591310688,0.009950909883716908,1.811913284257446
+11,mesh,0,"Evolution, Molecular",1626,221,22,10,0.0002568524266396546,0.010679653528701429,3.344302756067462
+11,mesh,0,Gene Rearrangement,1626,221,9,6,0.0003477103236196047,0.013637149571747616,4.904977375565611
+11,mesh,0,"Mice, Transgenic",1626,221,31,12,0.00038677294345369084,0.014957023617474896,2.8480513793606774
+11,mesh,0,Proteomics,1626,221,13,7,0.0006493037061211975,0.022582701225473095,3.9617124956491474
+11,mesh,0,"Adaptor Proteins, Signal Transducing",1626,221,21,9,0.0009010742026891093,0.028790970653336054,3.1531997414350355
+11,mesh,0,Proto-Oncogene Proteins c-bcl-6,1626,221,34,12,0.0010292322517490723,0.03179695168811379,2.5967527282406175
+11,mesh,0,Animals,1626,221,343,65,0.0010423731547963327,0.03202401970013177,1.3942719945120905
+11,mesh,1,"Carcinoma, Hepatocellular",1626,241,26,15,4.101652381988308e-07,9.861798987997975e-05,3.8924353654644115
+11,mesh,1,Prospective Studies,1626,241,15,11,4.856376736951361e-07,0.00011189901398058762,4.947717842323652
+11,mesh,1,Liver Neoplasms,1626,241,30,16,7.088464057936938e-07,0.0001223974229907312,3.5983402489626557
+11,mesh,1,Tertiary Lymphoid Structures,1626,241,12,9,4.410835544279473e-06,0.0006592410962125806,5.060165975103734
+11,mesh,1,Immunohistochemistry,1626,241,13,9,1.2489587751452553e-05,0.0009866774323647517,4.670922438557294
+11,mesh,1,"Regulatory Elements, Transcriptional",1626,241,16,10,1.5146818660796948e-05,0.0011319176647865826,4.216804979253112
+11,mesh,1,"Lymphocytes, Tumor-Infiltrating",1626,241,14,9,3.0473200693222967e-05,0.001896131941427356,4.337285121517486
+11,mesh,1,"Regulatory Sequences, Nucleic Acid",1626,241,7,6,6.160066622701406e-05,0.0035126113731950544,5.783046828689982
+11,mesh,1,Lung,1626,241,10,7,0.00011669684593456664,0.005813815838001383,4.722821576763486
+11,mesh,1,B7-H1 Antigen,1626,241,20,10,0.0002009568606314229,0.008750326293635972,3.3734439834024896
+11,mesh,2,"Herpesvirus 1, Human",1626,88,6,4,0.00011076530076273213,0.005568473756526442,12.318181818181818
+11,mesh,2,"Receptors, Immunologic",1626,88,7,4,0.0002477724990870946,0.010380166060239645,10.55844155844156
+11,mesh,2,Hematopoiesis,1626,88,9,4,0.0008199290525830066,0.02682963112889956,8.212121212121213
+11,mesh,2,Myeloid-Lymphoid Leukemia Protein,1626,88,9,4,0.0008199290525830066,0.02682963112889956,8.212121212121213
+11,mesh,2,"Mice, Knockout",1626,88,31,7,0.0009715657107977089,0.030184035846692867,4.172287390029326
+11,mesh,2,Human Embryonic Stem Cells,1626,88,10,4,0.0013103095436702687,0.03773964466925305,7.3909090909090915
+11,mesh,3,Diabetes Mellitus,1626,67,6,6,3.924027043648929e-09,2.7124836939223222e-06,24.268656716417908
+11,mesh,3,Neoplasms,1626,67,75,16,1.4826183267732578e-08,7.4535266791419235e-06,5.177313432835821
+11,mesh,3,CX3C Chemokine Receptor 1,1626,67,7,6,2.658164986234775e-08,1.2249710311565253e-05,20.801705756929636
+11,mesh,3,Liquid Biopsy,1626,67,11,7,4.273600287292961e-08,1.817923814517698e-05,15.443690637720486
+11,mesh,3,Calcium,1626,67,8,6,1.0289543443947235e-07,3.556323452814263e-05,18.20149253731343
+11,mesh,3,Cardiovascular Diseases,1626,67,8,6,1.0289543443947235e-07,3.556323452814263e-05,18.20149253731343
+11,mesh,3,Extracellular Vesicles,1626,67,13,7,2.080479107893549e-07,5.229567939386967e-05,13.067738231917337
+11,mesh,3,Cytomegalovirus,1626,67,10,6,7.227247044796297e-07,0.0001223974229907312,14.561194029850746
+11,mesh,3,Cytomegalovirus Infections,1626,67,10,6,7.227247044796297e-07,0.0001223974229907312,14.561194029850746
+11,mesh,3,HIV Infections,1626,67,10,6,7.227247044796297e-07,0.0001223974229907312,14.561194029850746
+11,mesh,4,Precision Medicine,1626,228,16,12,4.8158199607836594e-08,1.9022488845095454e-05,5.348684210526315
+11,mesh,4,Fatty Acids,1626,228,8,8,1.3429987598905586e-07,3.971318561994415e-05,7.13157894736842
+11,mesh,4,Proto-Oncogene Proteins p21(ras),1626,228,17,12,1.435344994156387e-07,3.971318561994415e-05,5.034055727554179
+11,mesh,4,CD8-Positive T-Lymphocytes,1626,228,41,18,2.336122485996591e-06,0.0003588543707655875,3.1309370988446728
+11,mesh,4,G-Protein-Coupled Receptor Kinase 1,1626,228,6,6,7.1794673830372995e-06,0.0007567570102706908,7.131578947368421
+11,mesh,4,Genetic Fitness,1626,228,6,6,7.1794673830372995e-06,0.0007567570102706908,7.131578947368421
+11,mesh,4,HCT116 Cells,1626,228,6,6,7.1794673830372995e-06,0.0007567570102706908,7.131578947368421
+11,mesh,4,Haploidy,1626,228,6,6,7.1794673830372995e-06,0.0007567570102706908,7.131578947368421
+11,mesh,4,Karyopherins,1626,228,6,6,7.1794673830372995e-06,0.0007567570102706908,7.131578947368421
+11,mesh,4,Luminescent Proteins,1626,228,6,6,7.1794673830372995e-06,0.0007567570102706908,7.131578947368421
+11,mesh,5,Liposomes,1626,320,37,28,1.383597609538863e-13,7.651294780749913e-10,3.84527027027027
+11,mesh,5,Nanoparticles,1626,320,38,28,4.32731808596441e-13,1.1965034507691593e-09,3.744078947368421
+11,mesh,5,Tumor Suppressor Protein p53,1626,320,69,37,1.3345020006358362e-10,1.475959212703235e-07,2.7247282608695653
+11,mesh,5,Gene Editing,1626,320,59,33,3.296793189294021e-10,3.0385443894659893e-07,2.8420550847457626
+11,mesh,5,Hematopoietic Stem Cells,1626,320,52,29,4.699590122474486e-09,2.887637041920434e-06,2.833774038461539
+11,mesh,5,CRISPR-Cas Systems,1626,320,65,31,1.7785392204103672e-07,4.6834866137473e-05,2.423365384615385
+11,mesh,5,RNA,1626,320,65,28,9.168665404726273e-06,0.0007567570102706908,2.188846153846154
+11,mesh,5,Basic Helix-Loop-Helix Proteins,1626,320,14,10,3.621288707007235e-05,0.0022006292911813195,3.629464285714286
+11,mesh,5,Chronic Pain,1626,320,10,8,6.478957686544223e-05,0.0035126113731950544,4.065
+11,mesh,5,NAV1.7 Voltage-Gated Sodium Channel,1626,320,10,8,6.478957686544223e-05,0.0035126113731950544,4.065
+11,mesh,6,"Tumor Cells, Cultured",1626,226,13,9,7.202171767741395e-06,0.0007567570102706908,4.980939414567733
+11,mesh,6,"Drug Resistance, Neoplasm",1626,226,28,12,0.00015239996577992722,0.00720317786976921,3.0834386852085967
+11,mesh,6,Oligodendroglia,1626,226,14,8,0.00017506690369554893,0.007935409651117914,4.111251580278129
+11,mesh,6,"Gene Expression Regulation, Neoplastic",1626,226,146,36,0.00018335578354327552,0.008243556772311493,1.7740332161474117
+11,mesh,6,Cell Lineage,1626,226,23,10,0.00048357069500746283,0.01806855367156263,3.128126202385533
+11,mesh,6,"Cell Line, Tumor",1626,226,205,45,0.0005033375834997563,0.018556378911691016,1.579322253399525
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+11,mesh,6,Prostatic Neoplasms,1626,226,22,9,0.0015882187780149758,0.043914249212114086,2.9432823813354787
+11,mesh,6,Antineoplastic Agents,1626,226,69,19,0.0017578056934109709,0.04812210635922114,1.9811465948441709
+11,mesh,7,Adult,1626,120,78,25,2.989063035846905e-11,5.509839529411129e-08,4.342948717948718
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+11,mesh,7,Prefrontal Cortex,1626,120,7,7,1.0107166657008086e-08,5.589263161325472e-06,13.55
+11,mesh,7,Major Depressive Disorder,1626,120,6,6,1.4362815775748336e-07,3.971318561994415e-05,13.55
+11,mesh,7,"Stress, Psychological",1626,120,6,6,1.4362815775748336e-07,3.971318561994415e-05,13.55
+11,mesh,7,Signal Transduction,1626,120,141,27,1.113036726452403e-06,0.0001810321499200526,2.5946808510638295
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+11,mesh,7,"Muscle, Skeletal",1626,120,16,8,5.4655379584925415e-06,0.0007567570102706908,6.7749999999999995
+11,mesh,7,Sex Characteristics,1626,120,12,6,9.144181472630093e-05,0.004682159587374483,6.775
+11,mesh,8,Prognosis,1626,28,12,3,0.0009078074157331896,0.028790970653336054,14.517857142857142
+11,mesh,9,Bacteria,1626,87,16,7,7.63248124497845e-06,0.0007567570102706908,8.176724137931034
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+11,mesh,9,"RNA, Bacterial",1626,87,16,7,7.63248124497845e-06,0.0007567570102706908,8.176724137931034
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+12,mesh,0,"Aged, 80 and over",1626,196,28,14,7.586558727338079e-07,0.0001233931463593517,4.1479591836734695
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+12,mesh,1,Tumor Suppressor Protein p53,1626,257,69,34,2.660192316194675e-11,2.9421727017113102e-08,3.117577398071392
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+12,gse_id,8,GSE240717,1626,85,49,9,0.0006996318770370822,0.02247923275198993,3.513565426170468
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+14,mesh,0,Pigmentation,1626,193,98,24,0.0002479774124932651,0.010713399149123094,2.0632335835888758
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+14,mesh,0,"Carcinoma, Renal Cell",1626,193,7,5,0.0003856817861750513,0.015234430553914526,6.017764618800888
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+14,mesh,1,"RNA, Bacterial",1626,91,16,7,1.0360022507547725e-05,0.0009710326180803207,7.8173076923076925
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+14,mesh,4,Tumor Suppressor Protein p53,1626,260,69,35,6.313196703202204e-12,1.163732592290273e-08,3.172240802675585
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+14,mesh,4,NF-kappa B,1626,260,6,5,0.0005275476494604613,0.019712731871451596,5.211538461538462
+14,mesh,5,Diabetes Mellitus,1626,67,6,6,3.924027043648929e-09,2.411096616819842e-06,24.268656716417908
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+15,mesh,0,Human Embryonic Stem Cells,1626,87,10,4,0.0012545844878648986,0.03875895093794911,7.475862068965517
+15,mesh,1,"Tumor Cells, Cultured",1626,228,13,9,7.768397101987214e-06,0.0007154137215183379,4.937246963562753
+15,mesh,1,"Drug Resistance, Neoplasm",1626,228,28,13,3.105378838908109e-05,0.001887114832874928,3.31109022556391
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+15,mesh,1,Oligodendroglia,1626,228,14,8,0.00018666867262747213,0.008976328344608007,4.075187969924812
+15,mesh,1,"Cell Line, Tumor",1626,228,205,45,0.0006208007557439134,0.023676056408716145,1.5654685494223362
+15,mesh,2,Bacteria,1626,91,16,9,3.019111000008886e-08,9.275379905582857e-06,10.050824175824175
+15,mesh,2,Esophageal Neoplasms,1626,91,16,9,3.019111000008886e-08,9.275379905582857e-06,10.050824175824175
+15,mesh,2,"RNA, Bacterial",1626,91,16,9,3.019111000008886e-08,9.275379905582857e-06,10.050824175824175
+15,mesh,2,Single-Cell Gene Expression Analysis,1626,91,16,9,3.019111000008886e-08,9.275379905582857e-06,10.050824175824175
+15,mesh,2,Microbiota,1626,91,20,9,3.6767629514960876e-07,7.011206593714952e-05,8.04065934065934
+15,mesh,2,Computational Biology,1626,91,21,9,6.140496642950136e-07,0.00010629249891300342,7.657770800627943
+15,mesh,2,Single-Cell Analysis,1626,91,65,15,1.1011797987025786e-06,0.0001486724116888394,4.12341504649197
+15,mesh,2,Myeloid Cells,1626,91,27,9,7.396553832582015e-06,0.0007154137215183379,5.956043956043955
+15,mesh,2,RNA-Seq,1626,91,51,12,1.1944085858588088e-05,0.0008925783080809747,4.204266321913381
+15,mesh,2,"Polymorphism, Single Nucleotide",1626,91,111,18,1.9266933928368978e-05,0.0013486853749858285,2.8975348975348973
+15,mesh,3,Diabetes Mellitus,1626,67,6,6,3.924027043648929e-09,2.7124836939223222e-06,24.268656716417908
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+15,mesh,3,CX3C Chemokine Receptor 1,1626,67,7,6,2.658164986234775e-08,9.275379905582857e-06,20.801705756929636
+15,mesh,3,Liquid Biopsy,1626,67,11,7,4.273600287292961e-08,1.2438426099331619e-05,15.443690637720486
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+15,mesh,3,HIV Infections,1626,67,10,6,7.227247044796297e-07,0.00010629249891300342,14.561194029850746
+15,mesh,4,Liposomes,1626,257,37,25,1.02590667972068e-12,5.673263938855361e-09,4.2748974655589445
+15,mesh,4,Nanoparticles,1626,257,38,25,2.5792519301267247e-12,7.131631586800394e-09,4.162400163833709
+15,mesh,4,Tumor Suppressor Protein p53,1626,257,69,34,2.660192316194675e-11,3.320185817259474e-08,3.117577398071392
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+15,mesh,4,Hematopoietic Stem Cells,1626,257,52,25,2.743623970825437e-08,9.275379905582857e-06,3.04175396587848
+15,mesh,4,CRISPR-Cas Systems,1626,257,65,28,7.728063838003631e-08,2.0940873735021935e-05,2.7254115534271177
+15,mesh,4,RNA,1626,257,65,25,5.213802094701023e-06,0.0006006734496603471,2.433403172702784
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+15,mesh,4,HEK293 Cells,1626,257,104,30,0.00035881884061253515,0.014807971556621786,1.8250523795270879
+15,mesh,5,Precision Medicine,1626,238,16,12,7.952230532286811e-08,2.0940873735021935e-05,5.123949579831932
+15,mesh,5,Fatty Acids,1626,238,8,8,1.9032802113246947e-07,4.0481306033175236e-05,6.831932773109243
+15,mesh,5,Proto-Oncogene Proteins p21(ras),1626,238,17,12,2.3547670578174473e-07,4.650664939189458e-05,4.822540781018289
+15,mesh,5,CD8-Positive T-Lymphocytes,1626,238,41,18,4.465565681786342e-06,0.0005292419933160385,2.999385119901619
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+15,mesh,5,Luminescent Proteins,1626,238,6,6,9.314609032426824e-06,0.0007154137215183379,6.831932773109244
+15,mesh,6,"Cell Line, Tumor",1626,297,205,71,1.2237976597888878e-09,9.668001512332214e-07,1.896132052229613
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