Card: say where AAA labels and predictions come from
Browse files
README.md
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567 abdominal CT scans from the TotalSegmentator dataset, with ground-truth masks, aortic
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measurements, abdominal aortic aneurysm (AAA) labels, a baseline model's predictions and
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image embeddings. The
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10 coded imaging institutes and 15 scanner models (Siemens, Philips, GE); the `institute`
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column in `tables/cases.parquet` says which. It is the canonical dataset of
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[SlicePoint](https://github.com/AshMatics/asher-aneurisk-hack-2026/tree/main/slicepoint),
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and scanners before it is switched on.
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**Not for clinical use.** The AAA labels come from a diameter rule applied to segmentation
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masks, not from radiology reports.
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## What is in it
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## How the values were made
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- **Labels:** `max_aortic_diameter_mm` is the maximum infrarenal outer-wall diameter,
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measured perpendicular to the centerline of the ground-truth aorta mask. `aaa` is
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diameter >= 30 mm; `aaa_size_class` is `none`, `30-54mm` or `>=55mm`.
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- **Features:** scanner and acquisition fields come from the TotalSegmentator metadata
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(v3.0.0 adds slice thickness). Contrast phase is predicted. `study_description` and
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`protocol_name` are **synthetic**: the source has none, so they are drawn from a
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567 abdominal CT scans from the TotalSegmentator dataset, with ground-truth masks, aortic
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measurements, abdominal aortic aneurysm (AAA) labels, a baseline model's predictions and
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image embeddings. The AAA labels are not radiologist reads: they come from a 30 mm
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threshold on the aortic diameter measured on the ground-truth aorta masks that ship with
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the TotalSegmentator dataset. The baseline predictions apply the same rule to masks from
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the public TotalSegmentator model. The scans were collected through University Hospital Basel but come from
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10 coded imaging institutes and 15 scanner models (Siemens, Philips, GE); the `institute`
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column in `tables/cases.parquet` says which. It is the canonical dataset of
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[SlicePoint](https://github.com/AshMatics/asher-aneurisk-hack-2026/tree/main/slicepoint),
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and scanners before it is switched on.
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**Not for clinical use.** The AAA labels come from a diameter rule applied to segmentation
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masks, not from radiology reports or clinical diagnoses.
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## What is in it
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## How the values were made
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- **Ground-truth masks:** the segmentations distributed with TotalSegmentator v2.0.1,
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unchanged. The dataset authors made them with model help and expert review and
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correction; they are not output of the SlicePoint pipeline.
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- **Labels:** `max_aortic_diameter_mm` is the maximum infrarenal outer-wall diameter,
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measured perpendicular to the centerline of the ground-truth aorta mask. `aaa` is
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diameter >= 30 mm; `aaa_size_class` is `none`, `30-54mm` or `>=55mm`. These are
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measurement-derived labels, not radiologist reads.
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- **Predictions (baseline model):** we ran the public TotalSegmentator model (v2.18.0,
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`total` task) on each CT and applied the same measurement and 30 mm rule to its aorta
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mask. Null means the model gave no answer. `_ref` columns use the ground-truth masks,
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`_pred` columns the model's.
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- **Features:** scanner and acquisition fields come from the TotalSegmentator metadata
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(v3.0.0 adds slice thickness). Contrast phase is predicted. `study_description` and
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`protocol_name` are **synthetic**: the source has none, so they are drawn from a
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