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"_meta": {
"purpose": "Label space of each dataset view and how well the corpus covers each label. coverage is one of: covered (histology or grading content), partial (taxonomy, grade or genetics only, no morphology text), uncovered (no free source read).",
"recorded": "2026-10-01",
"label_sources": "TCGA: catalog slides table. BRACS: bracs-slide-labels.csv on the thesis drive. EBR-coarse30: MahmoodLab Patho-Bench ebrains/diagnosis config (30 classes, labels only, CC BY-NC-ND 4.0, not redistributed here beyond the class names)."
},
"datasets": {
"tcga-nsclc": {
"labels": {
"LUAD": {
"entity": "lung:LUAD",
"coverage": "covered"
},
"LUSC": {
"entity": "lung:LUSC",
"coverage": "covered"
}
}
},
"bracs-fine": {
"labels": {
"N": {
"entity": "breast:N",
"coverage": "covered"
},
"PB": {
"entity": "breast:PB",
"coverage": "covered"
},
"UDH": {
"entity": "breast:UDH",
"coverage": "covered"
},
"FEA": {
"entity": "breast:FEA",
"coverage": "covered"
},
"ADH": {
"entity": "breast:ADH",
"coverage": "covered"
},
"DCIS": {
"entity": "breast:DCIS",
"coverage": "covered"
},
"IC": {
"entity": "breast:IC",
"coverage": "covered"
}
}
},
"bracs-coarse": {
"labels": {
"benign": {
"entity": "breast:group-benign",
"members": [
"N",
"PB",
"UDH"
],
"coverage": "covered"
},
"atypical": {
"entity": "breast:group-atypical",
"members": [
"FEA",
"ADH"
],
"coverage": "covered"
},
"malignant": {
"entity": "breast:group-malignant",
"members": [
"DCIS",
"IC"
],
"coverage": "covered"
}
}
},
"ebr-coarse30": {
"labels": {
"Glioblastoma IDH-wildtype": {
"entity": "cns:gbm-idh-wt",
"coverage": "covered"
},
"Gliosarcoma": {
"entity": "cns:gliosarcoma",
"coverage": "partial"
},
"Transitional meningioma": {
"entity": "cns:meningioma-transitional",
"coverage": "partial"
},
"Anaplastic meningioma": {
"entity": "cns:meningioma-anaplastic",
"coverage": "partial"
},
"Pituitary adenoma": {
"entity": "cns:pituitary-adenoma",
"coverage": "partial"
},
"Oligodendroglioma IDH-mutant and 1p/19q codeleted": {
"entity": "cns:oligodendroglioma",
"coverage": "covered"
},
"Haemangioma": {
"entity": "cns:haemangioma",
"coverage": "partial"
},
"Ganglioglioma": {
"entity": "cns:ganglioglioma",
"coverage": "partial"
},
"Pilocytic astrocytoma": {
"entity": "cns:pilocytic-astrocytoma",
"coverage": "partial"
},
"Schwannoma": {
"entity": "cns:schwannoma",
"coverage": "partial"
},
"Anaplastic oligodendroglioma IDH-mutant and 1p/19q codeleted": {
"entity": "cns:oligodendroglioma",
"coverage": "covered",
"note": "legacy name; grade 3 of the same type in CNS5"
},
"Fibrous meningioma": {
"entity": "cns:meningioma-fibrous",
"coverage": "partial"
},
"Anaplastic astrocytoma IDH-wildtype": {
"entity": "cns:anaplastic-astrocytoma-idh-wt-legacy",
"coverage": "partial",
"note": "legacy name; under CNS5 an IDH-wildtype astrocytic tumour with a GBM molecular criterion is glioblastoma, see the naming passage"
},
"Angiomatous meningioma": {
"entity": "cns:meningioma-angiomatous",
"coverage": "partial"
},
"Haemangioblastoma": {
"entity": "cns:haemangioblastoma",
"coverage": "partial"
},
"Adamantinomatous craniopharyngioma": {
"entity": "cns:craniopharyngioma-adamantinomatous",
"coverage": "partial"
},
"Anaplastic astrocytoma IDH-mutant": {
"entity": "cns:astrocytoma-idh-mutant",
"coverage": "covered",
"note": "legacy name; grade 3 of astrocytoma IDH-mutant in CNS5"
},
"Glioblastoma IDH-mutant": {
"entity": "cns:astrocytoma-idh-mutant",
"coverage": "covered",
"note": "legacy name; grade 4 of astrocytoma IDH-mutant in CNS5"
},
"Diffuse astrocytoma IDH-mutant": {
"entity": "cns:astrocytoma-idh-mutant",
"coverage": "covered",
"note": "grade 2"
},
"Ependymoma": {
"entity": "cns:ependymoma",
"coverage": "partial"
},
"Anaplastic ependymoma": {
"entity": "cns:ependymoma",
"coverage": "partial",
"note": "legacy name"
},
"Atypical meningioma": {
"entity": "cns:meningioma-atypical",
"coverage": "partial"
},
"Metastatic tumours": {
"entity": "cns:metastasis",
"coverage": "partial"
},
"Meningothelial meningioma": {
"entity": "cns:meningioma-meningothelial",
"coverage": "partial"
},
"Langerhans cell histiocytosis": {
"entity": "cns:lch",
"coverage": "partial"
},
"Diffuse large B-cell lymphoma of the CNS": {
"entity": "cns:cns-dlbcl",
"coverage": "partial"
},
"Secretory meningioma": {
"entity": "cns:meningioma-secretory",
"coverage": "partial"
},
"Haemangiopericytoma": {
"entity": "cns:haemangiopericytoma",
"coverage": "partial"
},
"Lipoma": {
"entity": "cns:lipoma",
"coverage": "partial"
},
"Medulloblastoma non-WNT/non-SHH": {
"entity": "cns:medulloblastoma",
"coverage": "partial"
}
}
}
}
}
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