text stringlengths 0 828 |
|---|
.. versionchanged:: 0.11.3 |
Clear temporary routes by setting ``df_routes`` property of |
:attr:`canvas_slave`. |
''' |
if self.plugin is None: |
return |
# XXX Negative `route_i` corresponds to temporary route being |
# drawn. Since electrode selection terminates route drawing, clear any |
# rows corresponding to negative `route_i` values from the routes |
# table. |
slave.df_routes = slave.df_routes.loc[slave.df_routes.route_i >= |
0].copy() |
state = self.canvas_slave.electrode_states.get(data['electrode_id'], 0) |
self.plugin.execute_async('microdrop.electrode_controller_plugin', |
'set_electrode_states', |
electrode_states=pd |
.Series([not state], |
index=[data['electrode_id']]))" |
3988,"def on_canvas_slave__electrode_pair_selected(self, slave, data): |
''' |
Process pair of selected electrodes. |
For now, this consists of finding the shortest path between the two |
electrodes and appending it to the list of droplet routes for the |
current step. |
Note that the droplet routes for a step are stored in a frame/table in |
the `DmfDeviceController` step options. |
.. versionchanged:: 0.11 |
Clear any temporary routes (drawn while mouse is down) from routes |
list. |
.. versionchanged:: 0.11.3 |
Clear temporary routes by setting ``df_routes`` property of |
:attr:`canvas_slave`. |
''' |
import networkx as nx |
source_id = data['source_id'] |
target_id = data['target_id'] |
if self.canvas_slave.device is None or self.plugin is None: |
return |
# XXX Negative `route_i` corresponds to temporary route being |
# drawn. Since electrode pair selection terminates route drawing, |
# clear any rows corresponding to negative `route_i` values from the |
# routes table. |
slave.df_routes = slave.df_routes.loc[slave.df_routes.route_i >= |
0].copy() |
try: |
shortest_path = self.canvas_slave.device.find_path(source_id, |
target_id) |
self.plugin.execute_async('droplet_planning_plugin', |
'add_route', drop_route=shortest_path) |
except nx.NetworkXNoPath: |
logger.error('No path found between %s and %s.', source_id, |
target_id)" |
3989,"def on_canvas_slave__route_electrode_added(self, slave, electrode_id): |
''' |
.. versionchanged:: 0.11 |
Draw temporary route currently being formed. |
.. versionchanged:: 0.11.3 |
Update routes table by setting ``df_routes`` property of |
:attr:`canvas_slave`. |
''' |
logger.debug('Route electrode added: %s', electrode_id) |
if slave._route.electrode_ids is None: |
return |
df_route = pd.DataFrame([[-1, e, i] for i, e in |
enumerate(slave._route.electrode_ids)], |
columns=['route_i', 'electrode_i', |
'transition_i']) |
# XXX Negative `route_i` corresponds to temporary route being |
# drawn. Append row entries for temporary route to existing routes |
# table. |
df_routes = slave.df_routes.loc[slave.df_routes.route_i >= 0].copy() |
self.canvas_slave.df_routes = pd.concat([df_routes, df_route])" |
3990,"def ping_hub(self): |
''' |
Attempt to ping the ZeroMQ plugin hub to verify connection is alive. |
If ping is successful, record timestamp. |
If ping is unsuccessful, call `on_heartbeat_error` method. |
''' |
if self.plugin is not None: |
try: |
self.plugin.execute(self.plugin.hub_name, 'ping', timeout_s=1, |
silent=True) |
except IOError: |
self.on_heartbeat_error() |
else: |
self.heartbeat_alive_timestamp = datetime.now() |
logger.debug('Hub connection alive as of %s', |
self.heartbeat_alive_timestamp) |
return True" |
3991,"def on_electrode_states_updated(self, states): |
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