whding123 commited on
Commit
5c8fc41
·
verified ·
1 Parent(s): 7fbb3a2

Upload sdfgnnRzJL_aneurysm2

Browse files
.gitattributes CHANGED
@@ -429,3 +429,4 @@ cfd_data_fix/r2EVkwBdXy_aneurysm1/geomagic_processed.obj filter=lfs diff=lfs mer
429
  cfd_data_fix/r2EVkwBdXy_aneurysm1/mesh.msh filter=lfs diff=lfs merge=lfs -text
430
  cfd_data_fix/rASk5uvMt2_aneurysm1/geomagic_processed.obj filter=lfs diff=lfs merge=lfs -text
431
  cfd_data_fix/rASk5uvMt2_aneurysm1/mesh.msh filter=lfs diff=lfs merge=lfs -text
 
 
429
  cfd_data_fix/r2EVkwBdXy_aneurysm1/mesh.msh filter=lfs diff=lfs merge=lfs -text
430
  cfd_data_fix/rASk5uvMt2_aneurysm1/geomagic_processed.obj filter=lfs diff=lfs merge=lfs -text
431
  cfd_data_fix/rASk5uvMt2_aneurysm1/mesh.msh filter=lfs diff=lfs merge=lfs -text
432
+ cfd_data_fix/sdfgnnRzJL_aneurysm2/mesh.msh filter=lfs diff=lfs merge=lfs -text
cfd_data_fix/sdfgnnRzJL_aneurysm2/blood_data.pt ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:f20144f8134210078f78e9b8f872494cfbdef5051d36940207cb0c7166dab462
3
+ size 3067596898
cfd_data_fix/sdfgnnRzJL_aneurysm2/branch_ranking.npy ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:edf57b3e7cc4d837db7a3b400e84ffa2cc07b6adc347edef9feabbc11c5183cb
3
+ size 144
cfd_data_fix/sdfgnnRzJL_aneurysm2/forward_fusion_info.npz ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:5b09b60665fc8bbdd76cdc8beaaf73bc13b15a8fb354f11a85f591d2f82faa81
3
+ size 5026
cfd_data_fix/sdfgnnRzJL_aneurysm2/fusion_info_extruded.npz ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:9857fd27a01eecba7dafdc57256c29e658168ed76c9d1fba97566beb51eb0076
3
+ size 6754
cfd_data_fix/sdfgnnRzJL_aneurysm2/geomagic_processed.obj ADDED
The diff for this file is too large to render. See raw diff
 
cfd_data_fix/sdfgnnRzJL_aneurysm2/ghd_forward_fusion_info.npz ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:cf67942acd5f0a9d77881a69694cbf34ce63f06033d6a4b09a743785affcab67
3
+ size 6034
cfd_data_fix/sdfgnnRzJL_aneurysm2/ghd_fusion_params.json ADDED
@@ -0,0 +1,11 @@
 
 
 
 
 
 
 
 
 
 
 
 
1
+ {
2
+ "flaw_opening_min_size": 5,
3
+ "init_step": 1,
4
+ "max_cl_length": null,
5
+ "ring_downsample_ratio": 1,
6
+ "smooth_n_rings": 5,
7
+ "smooth_n_iter": 10,
8
+ "extrude_outlets": true,
9
+ "extrude_inlet": true,
10
+ "min_torsion": true
11
+ }
cfd_data_fix/sdfgnnRzJL_aneurysm2/ghd_merged_reconstruction.obj ADDED
The diff for this file is too large to render. See raw diff
 
cfd_data_fix/sdfgnnRzJL_aneurysm2/ghd_reconstructed.obj ADDED
The diff for this file is too large to render. See raw diff
 
cfd_data_fix/sdfgnnRzJL_aneurysm2/ghd_smoothed_reconstruction.obj ADDED
The diff for this file is too large to render. See raw diff
 
cfd_data_fix/sdfgnnRzJL_aneurysm2/ghd_surface.vtp ADDED
The diff for this file is too large to render. See raw diff
 
cfd_data_fix/sdfgnnRzJL_aneurysm2/inlet_centroids.csv ADDED
The diff for this file is too large to render. See raw diff
 
cfd_data_fix/sdfgnnRzJL_aneurysm2/mesh.msh ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:bb4d7701a73d40a22cbe7487cea7811561e1a5973eeacd878658cb1e70e33af8
3
+ size 229199319
cfd_data_fix/sdfgnnRzJL_aneurysm2/reg_mesh.obj ADDED
The diff for this file is too large to render. See raw diff
 
cfd_data_fix/sdfgnnRzJL_aneurysm2/reg_mesh.vtp ADDED
The diff for this file is too large to render. See raw diff
 
cfd_data_fix/sdfgnnRzJL_aneurysm2/reg_mesh_regularization.json ADDED
@@ -0,0 +1,203 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ {
2
+ "input": "/media/yaplab2/wd8tb/wenhao/angioflow/cfd/angioflow_fix/sdfgnnRzJL_aneurysm2/ghd_smoothed_reconstruction.obj",
3
+ "tolerance": 0.25,
4
+ "mode": "dome_normalized",
5
+ "dome_sac_mm": 6.352468080647824,
6
+ "stopping": "relaxed",
7
+ "snap_levels": [
8
+ -1.0,
9
+ -0.5,
10
+ -0.25,
11
+ 0.0,
12
+ 0.25
13
+ ],
14
+ "assessment": {
15
+ "needs_regularization": true,
16
+ "worst_target_excess_sd": 2.751540916937686,
17
+ "tolerance_sd": -1.0,
18
+ "signed_excess_sd": {
19
+ "0.3": 2.751540916937686,
20
+ "0.38": 1.8870553293771213,
21
+ "0.47": 1.1614901827670185,
22
+ "0.58": 0.5610682667265771,
23
+ "0.72": 0.13004673236764963,
24
+ "0.9": -0.17329430227141268,
25
+ "1.1": -0.3705256176883633,
26
+ "1.35": -0.5097154460924705
27
+ },
28
+ "verdict": "rougher_than_reference",
29
+ "guard_scale": null,
30
+ "guard_below_band": null,
31
+ "target_scales": [
32
+ 0.3,
33
+ 0.38,
34
+ 0.47,
35
+ 0.58,
36
+ 0.72,
37
+ 0.9,
38
+ 1.1,
39
+ 1.35
40
+ ],
41
+ "measured_at_edge": 0.13602009439404106,
42
+ "edge_after_measurement_remesh": 0.11213140523950642,
43
+ "remesher": "auto",
44
+ "n_seeds": 4000,
45
+ "elapsed_s": 44.53,
46
+ "sac_span_mm": 6.352468080647824,
47
+ "alpha": 0.9681276508472946,
48
+ "stopping": "relaxed",
49
+ "reference_sac_mm": 6.15,
50
+ "target_scales_used": [
51
+ 0.3,
52
+ 0.38,
53
+ 0.47,
54
+ 0.58,
55
+ 0.72,
56
+ 0.9,
57
+ 1.1,
58
+ 1.35
59
+ ],
60
+ "target_scales_dropped": {
61
+ "1.65": "1.704 mm real: above the 1.60 mm calibre ceiling"
62
+ },
63
+ "scales_in_real_mm": {
64
+ "0.3": 0.30987649173891824,
65
+ "0.38": 0.39251022286929643,
66
+ "0.47": 0.4854731703909719,
67
+ "0.58": 0.5990945506952419,
68
+ "0.72": 0.7437035801734038,
69
+ "0.9": 0.9296294752167548,
70
+ "1.1": 1.1362138030427003,
71
+ "1.35": 1.3944442128251322
72
+ }
73
+ },
74
+ "forward": {
75
+ "status": "converged",
76
+ "converged": true,
77
+ "guard_scale_below_reference_at_input": false,
78
+ "smoother": "mcf",
79
+ "remesher": "auto",
80
+ "sigma_step_mm": 0.08,
81
+ "tolerance_sd": 0.25,
82
+ "time_budget_s": null,
83
+ "overshoot_limit_sd": -3.0,
84
+ "guard_tolerance_sd": 1000000.0,
85
+ "target_scales": [
86
+ 0.3,
87
+ 0.38,
88
+ 0.47,
89
+ 0.58,
90
+ 0.72,
91
+ 0.9,
92
+ 1.1,
93
+ 1.35
94
+ ],
95
+ "guard_scale": null,
96
+ "rounds": 2,
97
+ "total_sigma_mm": 0.1131370849898476,
98
+ "target_edge": 0.13602009439404106,
99
+ "export_edge": 0.1277928499118429,
100
+ "metrics_measured_at_edge": 0.13602009439404106,
101
+ "n_vertices_in": 2235,
102
+ "n_vertices_out": 38560,
103
+ "n_seeds_used": 4000,
104
+ "elapsed_s": 156.16,
105
+ "edge_out": 0.10422534423938609,
106
+ "quality_out": 0.9813694842065817,
107
+ "smoothing_displacement_mm": 0.06053516755720131,
108
+ "surface_deviation_vs_original_max_mm": 0.058564873076839434,
109
+ "surface_deviation_vs_original_mean_mm": 0.002539903006798748,
110
+ "patch_truncation_fraction": {
111
+ "0.3": 0.0,
112
+ "0.38": 0.0,
113
+ "0.47": 0.0,
114
+ "0.58": 0.0,
115
+ "0.72": 0.0,
116
+ "0.9": 0.0,
117
+ "1.1": 0.0,
118
+ "1.35": 0.0
119
+ },
120
+ "signed_excess_before": {
121
+ "0.3": 2.751540916937686,
122
+ "0.38": 1.8870553293771213,
123
+ "0.47": 1.1614901827670185,
124
+ "0.58": 0.5610682667265771,
125
+ "0.72": 0.13004673236764963,
126
+ "0.9": -0.17329430227141268,
127
+ "1.1": -0.3705256176883633,
128
+ "1.35": -0.5097154460924705
129
+ },
130
+ "signed_excess_after": {
131
+ "0.3": -0.041532248229141824,
132
+ "0.38": -0.30677233554275657,
133
+ "0.47": -0.4002890925071812,
134
+ "0.58": -0.44760265730435794,
135
+ "0.72": -0.4494904051802108,
136
+ "0.9": -0.46383501177203845,
137
+ "1.1": -0.5101760097796675,
138
+ "1.35": -0.5728995848907857
139
+ },
140
+ "below_band_after": {
141
+ "0.3": 0.0,
142
+ "0.38": 0.0,
143
+ "0.47": 0.0,
144
+ "0.58": 0.0,
145
+ "0.72": 0.012478082250319301,
146
+ "0.9": 0.10277498025516729,
147
+ "1.1": 0.32911932484988116,
148
+ "1.35": 0.561936426164759
149
+ },
150
+ "input_inspection": {
151
+ "n_vertices": 2235,
152
+ "n_faces": 4398,
153
+ "bbox_diagonal": 25.414021945751916,
154
+ "watertight": false,
155
+ "n_components": 1,
156
+ "n_degenerate_faces": 0,
157
+ "edge_mean": 0.47639461624669116,
158
+ "edge_cv": 0.5316698358092763,
159
+ "n_boundary_vertices": 72,
160
+ "warnings": []
161
+ },
162
+ "reference_cases": 323,
163
+ "sac_span_mm": 6.352468080647824,
164
+ "alpha": 0.9681276508472946,
165
+ "stopping": "relaxed",
166
+ "reference_sac_mm": 6.15,
167
+ "target_scales_used": [
168
+ 0.3,
169
+ 0.38,
170
+ 0.47,
171
+ 0.58,
172
+ 0.72,
173
+ 0.9,
174
+ 1.1,
175
+ 1.35
176
+ ],
177
+ "target_scales_dropped": {
178
+ "1.65": "1.704 mm real: above the 1.60 mm calibre ceiling"
179
+ },
180
+ "scales_in_real_mm": {
181
+ "0.3": 0.30987649173891824,
182
+ "0.38": 0.39251022286929643,
183
+ "0.47": 0.4854731703909719,
184
+ "0.58": 0.5990945506952419,
185
+ "0.72": 0.7437035801734038,
186
+ "0.9": 0.9296294752167548,
187
+ "1.1": 1.1362138030427003,
188
+ "1.35": 1.3944442128251322
189
+ },
190
+ "surface_deviation_vs_original_max_mm_real": 0.06049292469395343,
191
+ "surface_deviation_vs_original_mean_mm_real": 0.002623520777013086,
192
+ "smoothing_displacement_mm_real": 0.06252808449817708,
193
+ "total_sigma_mm_real": 0.11686174327407267,
194
+ "edge_out_real": 0.10765661341060678
195
+ },
196
+ "cap_shift_mm": [
197
+ 0.15656477820028525,
198
+ 0.1664827893437735
199
+ ],
200
+ "action": "regularized",
201
+ "surface_used": "/media/yaplab2/wd8tb/wenhao/angioflow/cfd/angioflow_fix/sdfgnnRzJL_aneurysm2/reg_mesh.vtp",
202
+ "reason": "roughness above reference (worst target excess +2.75 SD); regularizer status converged"
203
+ }
cfd_data_fix/sdfgnnRzJL_aneurysm2/wall_data.pt ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:190bd3ff06517df389529961cfff1fef89603fb969d90fbd7e22f344dd430ead
3
+ size 39865937