Upload ziSACL5Z7M_aneurysm1

.gitattributes

@@ -444,3 +444,4 @@ cfd_data_fix/W1GD4X6con_aneurysm1/geomagic_processed.obj filter=lfs diff=lfs mer
 cfd_data_fix/W1GD4X6con_aneurysm1/mesh.msh filter=lfs diff=lfs merge=lfs -text
 cfd_data_fix/yHqeJVY84k_aneurysm1/geomagic_processed.obj filter=lfs diff=lfs merge=lfs -text
 cfd_data_fix/yHqeJVY84k_aneurysm1/mesh.msh filter=lfs diff=lfs merge=lfs -text
+cfd_data_fix/ziSACL5Z7M_aneurysm1/mesh.msh filter=lfs diff=lfs merge=lfs -text

cfd_data_fix/ziSACL5Z7M_aneurysm1/blood_data.pt

@@ -0,0 +1,3 @@
+version https://git-lfs.github.com/spec/v1
+oid sha256:3f0d6cd3a49a298f8bbfc70831f376ee16114b26c758fff3707cfd3552134f1c
+size 3024463138

cfd_data_fix/ziSACL5Z7M_aneurysm1/branch_ranking.npy

@@ -0,0 +1,3 @@
+version https://git-lfs.github.com/spec/v1
+oid sha256:06a5e75b5c298e897a18975fc7df079bd9563f5345be6d6a3425b0042496bcf0
+size 144

cfd_data_fix/ziSACL5Z7M_aneurysm1/forward_fusion_info.npz

@@ -0,0 +1,3 @@
+version https://git-lfs.github.com/spec/v1
+oid sha256:147f6cd98456c76ff88db8973c31ba092033add79f5bb88656b352192ff79052
+size 5426

cfd_data_fix/ziSACL5Z7M_aneurysm1/fusion_info_extruded.npz

@@ -0,0 +1,3 @@
+version https://git-lfs.github.com/spec/v1
+oid sha256:bd9ca0355ffc7611883fa9f84bfde86e6584dcc894300cde694a557a294d4e2e
+size 6530

cfd_data_fix/ziSACL5Z7M_aneurysm1/ghd_forward_fusion_info.npz

@@ -0,0 +1,3 @@
+version https://git-lfs.github.com/spec/v1
+oid sha256:b984753b70cbe99f087d4ff5d7b055f1754104455935bae99e44f019df702d88
+size 6242

cfd_data_fix/ziSACL5Z7M_aneurysm1/ghd_fusion_params.json

@@ -0,0 +1,11 @@
+{
+  "flaw_opening_min_size": 5,
+  "init_step": 1,
+  "max_cl_length": null,
+  "ring_downsample_ratio": 1,
+  "smooth_n_rings": 5,
+  "smooth_n_iter": 10,
+  "extrude_outlets": true,
+  "extrude_inlet": true,
+  "min_torsion": true
+}

cfd_data_fix/ziSACL5Z7M_aneurysm1/mesh.msh

@@ -0,0 +1,3 @@
+version https://git-lfs.github.com/spec/v1
+oid sha256:36c8d34deef1b7a3eb3911d97ee79f4d25ea9d56d45dc7f41037d6762f358ca6
+size 225750037

cfd_data_fix/ziSACL5Z7M_aneurysm1/reg_mesh_regularization.json

@@ -0,0 +1,194 @@
+{
+  "input": "/media/yaplab2/wd8tb/wenhao/angioflow/cfd/angioflow_fix/ziSACL5Z7M_aneurysm1/ghd_smoothed_reconstruction.obj",
+  "tolerance": 0.25,
+  "mode": "dome_normalized",
+  "dome_sac_mm": 3.968177313340702,
+  "stopping": "relaxed",
+  "snap_levels": [
+    -1.0,
+    -0.5,
+    -0.25,
+    0.0,
+    0.25
+  ],
+  "assessment": {
+    "needs_regularization": true,
+    "worst_target_excess_sd": 1.255941164064761,
+    "tolerance_sd": -1.0,
+    "signed_excess_sd": {
+      "0.47": 1.255941164064761,
+      "0.58": 0.4669804928721725,
+      "0.72": -0.162134931290557,
+      "0.9": -0.6301197190118597,
+      "1.1": -0.9252197966496389,
+      "1.35": -1.1571643825140787,
+      "1.65": -1.3401072459882524
+    },
+    "verdict": "rougher_than_reference",
+    "guard_scale": null,
+    "guard_below_band": null,
+    "target_scales": [
+      0.47,
+      0.58,
+      0.72,
+      0.9,
+      1.1,
+      1.35,
+      1.65
+    ],
+    "measured_at_edge": 0.13602009439404106,
+    "edge_after_measurement_remesh": 0.1122211803344729,
+    "remesher": "auto",
+    "n_seeds": 4000,
+    "elapsed_s": 154.06,
+    "sac_span_mm": 3.968177313340702,
+    "alpha": 1.5498299381240301,
+    "stopping": "relaxed",
+    "reference_sac_mm": 6.15,
+    "target_scales_used": [
+      0.47,
+      0.58,
+      0.72,
+      0.9,
+      1.1,
+      1.35,
+      1.65
+    ],
+    "target_scales_dropped": {
+      "0.3": "0.194 mm real: below the 0.30 mm resolution floor",
+      "0.38": "0.245 mm real: below the 0.30 mm resolution floor"
+    },
+    "scales_in_real_mm": {
+      "0.47": 0.3032590792309154,
+      "0.58": 0.374234608412619,
+      "0.72": 0.4645671000984236,
+      "0.9": 0.5807088751230295,
+      "1.1": 0.7097552918170361,
+      "1.35": 0.8710633126845444,
+      "1.65": 1.0646329377255541
+    }
+  },
+  "forward": {
+    "status": "converged",
+    "converged": true,
+    "guard_scale_below_reference_at_input": false,
+    "smoother": "mcf",
+    "remesher": "auto",
+    "sigma_step_mm": 0.08,
+    "tolerance_sd": 0.25,
+    "time_budget_s": null,
+    "overshoot_limit_sd": -3.0,
+    "guard_tolerance_sd": 1000000.0,
+    "target_scales": [
+      0.47,
+      0.58,
+      0.72,
+      0.9,
+      1.1,
+      1.35,
+      1.65
+    ],
+    "guard_scale": null,
+    "rounds": 2,
+    "total_sigma_mm": 0.1131370849898476,
+    "target_edge": 0.13602009439404106,
+    "export_edge": 0.204577551832372,
+    "metrics_measured_at_edge": 0.13602009439404106,
+    "n_vertices_in": 2594,
+    "n_vertices_out": 38455,
+    "n_seeds_used": 4000,
+    "elapsed_s": 741.94,
+    "edge_out": 0.16199445095969056,
+    "quality_out": 0.98218904993288,
+    "smoothing_displacement_mm": 0.039051644904627265,
+    "surface_deviation_vs_original_max_mm": 0.05125095883057158,
+    "surface_deviation_vs_original_mean_mm": 0.0023627893126464882,
+    "patch_truncation_fraction": {
+      "0.47": 0.0,
+      "0.58": 0.0,
+      "0.72": 0.0,
+      "0.9": 0.0,
+      "1.1": 0.0,
+      "1.35": 0.0,
+      "1.65": 0.0
+    },
+    "signed_excess_before": {
+      "0.47": 1.255941164064761,
+      "0.58": 0.4669804928721725,
+      "0.72": -0.162134931290557,
+      "0.9": -0.6301197190118597,
+      "1.1": -0.9252197966496389,
+      "1.35": -1.1571643825140787,
+      "1.65": -1.3401072459882524
+    },
+    "signed_excess_after": {
+      "0.47": -0.26126446806492304,
+      "0.58": -0.6429657504779835,
+      "0.72": -0.9087185100931351,
+      "0.9": -1.0903113600083183,
+      "1.1": -1.2045871996700164,
+      "1.35": -1.3078437511355467,
+      "1.65": -1.4167491122998448
+    },
+    "below_band_after": {
+      "0.47": 0.11535078342958549,
+      "0.58": 0.3164734069740215,
+      "0.72": 0.48436955320478575,
+      "0.9": 0.6377357311338828,
+      "1.1": 0.7674754709059853,
+      "1.35": 0.9307633084089386,
+      "1.65": 1.121565928843064
+    },
+    "input_inspection": {
+      "n_vertices": 2594,
+      "n_faces": 5114,
+      "bbox_diagonal": 39.19088418663248,
+      "watertight": false,
+      "n_components": 1,
+      "n_degenerate_faces": 0,
+      "edge_mean": 0.6851866096152626,
+      "edge_cv": 0.5043127522312197,
+      "n_boundary_vertices": 74,
+      "warnings": []
+    },
+    "reference_cases": 323,
+    "sac_span_mm": 3.968177313340702,
+    "alpha": 1.5498299381240301,
+    "stopping": "relaxed",
+    "reference_sac_mm": 6.15,
+    "target_scales_used": [
+      0.47,
+      0.58,
+      0.72,
+      0.9,
+      1.1,
+      1.35,
+      1.65
+    ],
+    "target_scales_dropped": {
+      "0.3": "0.194 mm real: below the 0.30 mm resolution floor",
+      "0.38": "0.245 mm real: below the 0.30 mm resolution floor"
+    },
+    "scales_in_real_mm": {
+      "0.47": 0.3032590792309154,
+      "0.58": 0.374234608412619,
+      "0.72": 0.4645671000984236,
+      "0.9": 0.5807088751230295,
+      "1.1": 0.7097552918170361,
+      "1.35": 0.8710633126845444,
+      "1.65": 1.0646329377255541
+    },
+    "surface_deviation_vs_original_max_mm_real": 0.03306876294608658,
+    "surface_deviation_vs_original_mean_mm_real": 0.0015245474709996204,
+    "smoothing_displacement_mm_real": 0.025197374204744542,
+    "total_sigma_mm_real": 0.07299967706572555,
+    "edge_out_real": 0.1045240171033052
+  },
+  "cap_shift_mm": [
+    0.2588708205448349,
+    0.10544512330244686
+  ],
+  "action": "regularized",
+  "surface_used": "/media/yaplab2/wd8tb/wenhao/angioflow/cfd/angioflow_fix/ziSACL5Z7M_aneurysm1/reg_mesh.vtp",
+  "reason": "roughness above reference (worst target excess +1.26 SD); regularizer status converged"
+}

cfd_data_fix/ziSACL5Z7M_aneurysm1/wall_data.pt

@@ -0,0 +1,3 @@
+version https://git-lfs.github.com/spec/v1
+oid sha256:d32ce6300692a48ced55b1d8c6e2dc172af60ff6ac2194415aa4292809c7adc3
+size 39698321