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paradoxdan commited on
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Delete replogle_k562_essential

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replogle_k562_essential/meta.yaml DELETED
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- build:
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- built_at: '2026-09-04T15:11:08.906646'
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- pkg_version: 0.1.0
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- dataset:
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- assay: Perturb-seq
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- cell_type: null
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- disease: chronic_myeloid_leukemia
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- modality: RNA
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- name: replogle_k562_essential
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- organism: homo_sapiens
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- paper_name: Mapping information-rich genotype-phenotype landscapes with genome-scale
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- Perturb-seq
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- paper_url: https://pmc.ncbi.nlm.nih.gov/articles/PMC9380471/
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- perturbation_method: CRISPRi
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- perturbation_type: genetic
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- sample_name: K562
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- sample_type: cell_line
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- version: 0.1.0
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- year_published: 2022
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- expression:
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- format: h5ad
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- h5ad_path: K562_essential_raw_singlecell_01.h5ad
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- prefix: null
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- preprocessed: false
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- root_path: replogle_k562_essential
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- perturbation:
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- barcode_column: null
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- control_names:
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- - non-targeting
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- file_name: null
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- guide_aliases: null
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- header_row: null
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- joined: true
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- perturbation_identity_column: gene
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- root_path: replogle_k562_essential
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- preprocessing:
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- min_cells: 3
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- min_genes: 200
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- n_hvg: 2000
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- normalized_sum: 10000
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- source:
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- download_url:
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- - https://plus.figshare.com/ndownloader/files/35773219
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- identifier: https://doi.org/10.25452/figshare.plus.20029387
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- provider: figshare
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
replogle_k562_essential/qc/coverage.png DELETED

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replogle_k562_essential/qc/perturbation_stats.csv DELETED
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