Publish replogle_k562_essential

.gitattributes

@@ -60,3 +60,4 @@ saved_model/**/* filter=lfs diff=lfs merge=lfs -text
 *.webm filter=lfs diff=lfs merge=lfs -text
 adamson2016/processed.h5ad filter=lfs diff=lfs merge=lfs -text
 norman2019/processed.h5ad filter=lfs diff=lfs merge=lfs -text
+replogle_k562_essential/processed.h5ad filter=lfs diff=lfs merge=lfs -text

replogle_k562_essential/meta.yaml

@@ -0,0 +1,45 @@
+build:
+  built_at: '2026-09-04T15:11:08.906646'
+  pkg_version: 0.1.0
+dataset:
+  assay: Perturb-seq
+  cell_type: null
+  disease: chronic_myeloid_leukemia
+  modality: RNA
+  name: replogle_k562_essential
+  organism: homo_sapiens
+  paper_name: Mapping information-rich genotype-phenotype landscapes with genome-scale
+    Perturb-seq
+  paper_url: https://pmc.ncbi.nlm.nih.gov/articles/PMC9380471/
+  perturbation_method: CRISPRi
+  perturbation_type: genetic
+  sample_name: K562
+  sample_type: cell_line
+  version: 0.1.0
+  year_published: 2022
+expression:
+  format: h5ad
+  h5ad_path: K562_essential_raw_singlecell_01.h5ad
+  prefix: null
+  preprocessed: false
+  root_path: replogle_k562_essential
+perturbation:
+  barcode_column: null
+  control_names:
+  - non-targeting
+  file_name: null
+  guide_aliases: null
+  header_row: null
+  joined: true
+  perturbation_identity_column: gene
+  root_path: replogle_k562_essential
+preprocessing:
+  min_cells: 3
+  min_genes: 200
+  n_hvg: 2000
+  normalized_sum: 10000
+source:
+  download_url:
+  - https://plus.figshare.com/ndownloader/files/35773219
+  identifier: https://doi.org/10.25452/figshare.plus.20029387
+  provider: figshare