Create OmniGenome
Browse files- jcole1/OmniGenome +39 -0
jcole1/OmniGenome
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{
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"config":{
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"model":"omnigenome-52M",
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"model_args":"pretrained=yangheng/OmniGenome-52M,revision=main,dtype=bfloat16",
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"num_fewshot":0,
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"batch_size":1,
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"batch_sizes":[
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],
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"device":"cpu",
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"no_cache":true,
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"limit":20,
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"bootstrap_iters":100000,
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"description_dict":{"Tokenization":"SNT", "# of Params":"52M", "Pretraining Data":"54.2B Tokens", "Species":"1124 Plant Species", "Nucleic Acid":"mRNA, CDS, UTR"},
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"model_dtype":"bfloat16",
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"model_name":"OmniGenome-52M",
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"model_sha":"main"
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},
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"results":{
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"mRNA":{
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"RMSE":0.7191
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},
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"SNMD":{
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"AUC":62.44
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},
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"SNMR":{
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"F1":48.91
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},
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"ArchiveII":{
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"F1":94.98
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},
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"bpRNA":{
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"F1":82.34
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},
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"RNAStralign":{
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"F1":99.01
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}
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}
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}
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