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Datasets:
yashvir
/
seq2state-data

Tasks:
Tabular Regression
Tabular Classification
Modalities:
Text
Tags:
genomics
crispr
enhancer-gene
perturb-seq
License:
Dataset card Data Studio Files
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yashvir commited on
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·
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  1. .gitattributes +3 -0
  2. data/interim/external_e2g/encode_re2g/ENCFF269DKY.hg19.bed +3 -0
  3. data/interim/external_e2g/encode_re2g/ENCFF976OKL.hg19.bed +3 -0
  4. data/interim/screen_v4_liftover/hg19/GRCh38-cCREs.ELS.hg19.bed +3 -0
  5. data/interim/screen_v4_liftover/hg19/GRCh38-cCREs.ELS.hg19.unmapped.bed +0 -0
  6. data/interim/screen_v4_liftover/hg19/GRCh38-cCREs.PLS.hg19.unmapped.bed +272 -0
  7. data/interim/screen_v4_liftover/hg19/liftover_qc.yaml +21 -0
  8. results/s2t/gasperini_gse120861/learned_ensemble_logistic_deepset_nonnearest_raw_predictions_labeled.parquet +3 -0
  9. results/s2t/gasperini_gse120861/learned_lightgbm_counterfactual_proxy_v2_rich_region_conservative_predictions_labeled.parquet +3 -0
  10. results/s2t/gasperini_gse120861/learned_listwise_observed_hic_l2_01_b01_predictions_labeled.parquet +3 -0
  11. results/s2t/gasperini_gse120861/learned_logistic_k562_expr_cage_molecular_c001_predictions_labeled.parquet +3 -0
  12. results/s2t/gasperini_gse120861/learned_logistic_lifted_ccre_predictions_labeled.parquet +3 -0
  13. results/s2t/gasperini_gse120861/learned_logistic_observed_hic_reabc_c0003_predictions_labeled.parquet +3 -0
  14. results/s2t/gasperini_gse120861/learned_logistic_re2g_extended_highconf_c0003_predictions_labeled.parquet +3 -0
  15. results/s2t/gasperini_gse120861/learned_logistic_re2g_extended_vhighconf_c0003_predictions_labeled.parquet +3 -0
  16. results/s2t/gasperini_gse120861/learned_proxy_v2_rich_without_contact_high_confidence_c0p0003_predictions_labeled.parquet +3 -0
  17. results/s2t/gasperini_gse120861/learned_proxy_v2_rich_without_contact_high_confidence_c0p03_predictions_labeled.parquet +3 -0
  18. results/s2t/gasperini_gse120861/learned_regime_ensemble_s2t_conservative_g0025_predictions_labeled.parquet +3 -0
  19. results/s2t/gasperini_gse120861/learned_regime_ensemble_s2t_gapclose_g010_predictions_labeled.parquet +3 -0
  20. results/s2t/gasperini_gse120861/learned_s2t_proxy_v2_only_denominator_competition_logistic_predictions_labeled.parquet +3 -0
  21. results/s2t/gasperini_gse120861/learned_s2t_proxy_v2_without_promoter_activity_logistic_predictions_labeled.parquet +3 -0
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