data: 5546 structures, 9 DFT jobs (part 2)
Browse files- dft/4665/novelty.json +28 -0
- dft/511/novelty.json +30 -0
- dft/511/runs/agm005666315/failed.json +1 -0
- dft/511/runs/agm005666315/relax.in +55 -0
- dft/511/runs/agm005666315/relax.out.gz +3 -0
- dft/511/runs/agm010191002/energy.json +8 -0
- dft/511/runs/agm010191002/relax.in +58 -0
- dft/511/runs/agm010191002/relax.out.gz +3 -0
- dft/511/runs/agm010191002/relaxed.cif +33 -0
- dft/511/runs/agm010191002/scf.in +55 -0
- dft/511/runs/agm010191002/scf.out.gz +3 -0
- dft/511/runs/candidate/relax.in +71 -0
- dft/511/runs/candidate/relax.out.gz +3 -0
- dft/974/novelty.json +43 -0
- dft/974/runs/agm002166439/relax.in +55 -0
- dft/974/runs/agm002166439/relax.out.gz +3 -0
- dft_results.csv +10 -10
- stats.json +46 -31
- structures.csv +0 -0
- structures.jsonl.gz +2 -2
dft/4665/novelty.json
ADDED
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@@ -0,0 +1,28 @@
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| 1 |
+
{
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| 2 |
+
"formula": "KTlAgCl3",
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| 3 |
+
"checked_at": "2026-11-03 14:26:37",
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| 4 |
+
"databases": {
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| 5 |
+
"Alexandria PBE": [
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| 6 |
+
"agm005026840"
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| 7 |
+
],
|
| 8 |
+
"nmd/nmd": [
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| 9 |
+
"RwiHcKfUTBNE_JdvaKRBR75M_QH4",
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| 10 |
+
"VGtU-RtoJB-3yf3PPSXgme9MdsAO",
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| 11 |
+
"ZINukU2EdbjyliSyHzLxV5RWLrUL",
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| 12 |
+
"jXVPbCVeYg0ZYR9dfXPHRjo041CU"
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| 13 |
+
]
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| 14 |
+
},
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| 15 |
+
"literature": [],
|
| 16 |
+
"errors": [],
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| 17 |
+
"unavailable": [
|
| 18 |
+
"aflow/aflow: HTTPSConnectionPool(host='aflow.org', port=443): Max retries exceeded with url: /API/optimade/v1/str",
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| 19 |
+
"cmr/cmr: 404 Client Error: Not Found for url: https://www.optimade.org/v1/structures?filter=elements+HAS+ALL+",
|
| 20 |
+
"atomgpt/jarvis-dft: HTTP 503",
|
| 21 |
+
"mpdd/mpdd: HTTPConnectionPool(host='mpddoptimade.phaseslab.org', port=80): Read timed out. (read timeout=25)",
|
| 22 |
+
"matterverse/matterverse: HTTPSConnectionPool(host='optimade.matterverse.ai', port=443): Read timed out. (read timeout=25)",
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| 23 |
+
"mpod/mpod: HTTPConnectionPool(host='mpod_optimade.cimav.edu.mx', port=80): Max retries exceeded with url: /v1/s"
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| 24 |
+
],
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| 25 |
+
"spellings_searched": 24,
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| 26 |
+
"sources_checked": 31,
|
| 27 |
+
"verdict": "found"
|
| 28 |
+
}
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dft/511/novelty.json
ADDED
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@@ -0,0 +1,30 @@
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| 1 |
+
{
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| 2 |
+
"formula": "TbPr4Te5",
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| 3 |
+
"checked_at": "2026-11-03 14:21:07",
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| 4 |
+
"databases": {
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| 5 |
+
"Alexandria PBE": [
|
| 6 |
+
"agm003653003"
|
| 7 |
+
],
|
| 8 |
+
"nmd/nmd": [
|
| 9 |
+
"Urw0sfCTuOAlCT1XYDA71eGoXVex",
|
| 10 |
+
"cE83Tcq8nFHhpkC3JdTaQt5kAjFx",
|
| 11 |
+
"e6VNa3HJ5qiGwqFRC80Nb8oxRBUn",
|
| 12 |
+
"jAVfwjYU9g0k0RAp1JlBaZ9K4h09"
|
| 13 |
+
]
|
| 14 |
+
},
|
| 15 |
+
"literature": [],
|
| 16 |
+
"errors": [
|
| 17 |
+
"MPDS: Expecting value: line 1 column 1 (char 0)"
|
| 18 |
+
],
|
| 19 |
+
"unavailable": [
|
| 20 |
+
"aflow/aflow: HTTPSConnectionPool(host='aflow.org', port=443): Max retries exceeded with url: /API/optimade/v1/str",
|
| 21 |
+
"cmr/cmr: HTTPSConnectionPool(host='cmr-optimade.fysik.dtu.dk', port=443): Max retries exceeded with url: /v1/",
|
| 22 |
+
"tcod/tcod: ('Connection aborted.', RemoteDisconnected('Remote end closed connection without response'))",
|
| 23 |
+
"mpdd/mpdd: HTTPConnectionPool(host='mpddoptimade.phaseslab.org', port=80): Read timed out. (read timeout=25)",
|
| 24 |
+
"mpod/mpod: HTTPConnectionPool(host='mpod_optimade.cimav.edu.mx', port=80): Max retries exceeded with url: /v1/s",
|
| 25 |
+
"matterverse/matterverse: HTTPSConnectionPool(host='optimade.matterverse.ai', port=443): Read timed out. (read timeout=25)"
|
| 26 |
+
],
|
| 27 |
+
"spellings_searched": 6,
|
| 28 |
+
"sources_checked": 30,
|
| 29 |
+
"verdict": "found"
|
| 30 |
+
}
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dft/511/runs/agm005666315/failed.json
ADDED
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@@ -0,0 +1 @@
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| 1 |
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{"at": 1793698991.6554074, "stage": "relax"}
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dft/511/runs/agm005666315/relax.in
ADDED
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@@ -0,0 +1,55 @@
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| 1 |
+
&CONTROL
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| 2 |
+
calculation = 'vc-relax'
|
| 3 |
+
nstep = 150
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| 4 |
+
tstress = .true.
|
| 5 |
+
tprnfor = .true.
|
| 6 |
+
outdir = '/opt/dft/jobs/511/runs/agm005666315/tmp'
|
| 7 |
+
prefix = 'relax'
|
| 8 |
+
etot_conv_thr = 1e-05
|
| 9 |
+
forc_conv_thr = 0.001
|
| 10 |
+
disk_io = 'low'
|
| 11 |
+
pseudo_dir = '/opt/dft/sssp'
|
| 12 |
+
/
|
| 13 |
+
&SYSTEM
|
| 14 |
+
ecutwfc = 40.0
|
| 15 |
+
ecutrho = 320.0
|
| 16 |
+
occupations = 'smearing'
|
| 17 |
+
degauss = 0.01
|
| 18 |
+
smearing = 'mv'
|
| 19 |
+
ntyp = 3
|
| 20 |
+
nat = 4
|
| 21 |
+
ibrav = 0
|
| 22 |
+
/
|
| 23 |
+
&ELECTRONS
|
| 24 |
+
electron_maxstep = 200
|
| 25 |
+
conv_thr = 1e-07
|
| 26 |
+
mixing_beta = 0.3
|
| 27 |
+
/
|
| 28 |
+
&IONS
|
| 29 |
+
/
|
| 30 |
+
&CELL
|
| 31 |
+
press_conv_thr = 0.5
|
| 32 |
+
/
|
| 33 |
+
&FCP
|
| 34 |
+
/
|
| 35 |
+
&RISM
|
| 36 |
+
/
|
| 37 |
+
ATOMIC_SPECIES
|
| 38 |
+
Tb 158.92535 Tb.GGA-PBE-paw-v1.0.UPF
|
| 39 |
+
Pr 140.90766 Pr.GGA-PBE-paw-v1.0.UPF
|
| 40 |
+
Te 127.6 Te_pbe_v1.uspp.F.UPF
|
| 41 |
+
|
| 42 |
+
K_POINTS automatic
|
| 43 |
+
5 5 3 0 0 0
|
| 44 |
+
|
| 45 |
+
CELL_PARAMETERS angstrom
|
| 46 |
+
4.32803724000000 0.00000000000000 0.00000000000000
|
| 47 |
+
2.16401839879876 3.74819071867384 0.00000000000000
|
| 48 |
+
2.16401981903880 1.24939494702567 7.72860495240506
|
| 49 |
+
|
| 50 |
+
ATOMIC_POSITIONS angstrom
|
| 51 |
+
Tb 6.4920547103 3.7481875216 7.6339595287
|
| 52 |
+
Pr 4.3280377438 2.4987928100 3.9545286836
|
| 53 |
+
Te 2.1640194965 1.2493953977 5.9015248715
|
| 54 |
+
Te 2.1640188262 1.2493964294 1.8314915686
|
| 55 |
+
|
dft/511/runs/agm005666315/relax.out.gz
ADDED
|
@@ -0,0 +1,3 @@
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| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:9bd7f6a7d85405c08499025a4f574c35b7c2568586c33bcac6aaf451c1540b6d
|
| 3 |
+
size 8617
|
dft/511/runs/agm010191002/energy.json
ADDED
|
@@ -0,0 +1,8 @@
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| 1 |
+
{
|
| 2 |
+
"energy_eV": -29115.982611837037,
|
| 3 |
+
"natoms": 8,
|
| 4 |
+
"e_per_atom": -3639.4978264796296,
|
| 5 |
+
"vol_per_atom": 31.50166377036196,
|
| 6 |
+
"vol_change_pct": -4.998055631503906,
|
| 7 |
+
"hours": 2.97
|
| 8 |
+
}
|
dft/511/runs/agm010191002/relax.in
ADDED
|
@@ -0,0 +1,58 @@
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|
| 1 |
+
&CONTROL
|
| 2 |
+
calculation = 'vc-relax'
|
| 3 |
+
nstep = 150
|
| 4 |
+
tstress = .true.
|
| 5 |
+
tprnfor = .true.
|
| 6 |
+
outdir = '/opt/dft/jobs/511/runs/agm010191002/tmp'
|
| 7 |
+
prefix = 'relax'
|
| 8 |
+
etot_conv_thr = 1e-05
|
| 9 |
+
forc_conv_thr = 0.001
|
| 10 |
+
disk_io = 'low'
|
| 11 |
+
pseudo_dir = '/opt/dft/sssp'
|
| 12 |
+
/
|
| 13 |
+
&SYSTEM
|
| 14 |
+
ecutwfc = 40.0
|
| 15 |
+
ecutrho = 320.0
|
| 16 |
+
occupations = 'smearing'
|
| 17 |
+
degauss = 0.01
|
| 18 |
+
smearing = 'mv'
|
| 19 |
+
ntyp = 2
|
| 20 |
+
nat = 8
|
| 21 |
+
ibrav = 0
|
| 22 |
+
/
|
| 23 |
+
&ELECTRONS
|
| 24 |
+
electron_maxstep = 200
|
| 25 |
+
conv_thr = 1e-07
|
| 26 |
+
mixing_beta = 0.3
|
| 27 |
+
/
|
| 28 |
+
&IONS
|
| 29 |
+
/
|
| 30 |
+
&CELL
|
| 31 |
+
press_conv_thr = 0.5
|
| 32 |
+
/
|
| 33 |
+
&FCP
|
| 34 |
+
/
|
| 35 |
+
&RISM
|
| 36 |
+
/
|
| 37 |
+
ATOMIC_SPECIES
|
| 38 |
+
Pr 140.90766 Pr.GGA-PBE-paw-v1.0.UPF
|
| 39 |
+
Te 127.6 Te_pbe_v1.uspp.F.UPF
|
| 40 |
+
|
| 41 |
+
K_POINTS automatic
|
| 42 |
+
5 5 2 0 0 0
|
| 43 |
+
|
| 44 |
+
CELL_PARAMETERS angstrom
|
| 45 |
+
4.45514614000000 0.00000000000000 0.00000000000000
|
| 46 |
+
-2.22757306595963 3.85826973714489 0.00000000000000
|
| 47 |
+
0.00000000000000 0.00000000000000 15.43250562000000
|
| 48 |
+
|
| 49 |
+
ATOMIC_POSITIONS angstrom
|
| 50 |
+
Pr -0.0000000196 2.5721798376 13.6204470454
|
| 51 |
+
Pr 2.2275730936 1.2860898995 1.8120585746
|
| 52 |
+
Pr 2.2275730936 1.2860898995 5.9041942354
|
| 53 |
+
Pr -0.0000000196 2.5721798376 9.5283113846
|
| 54 |
+
Te -0.0000000196 2.5721798376 3.8581264050
|
| 55 |
+
Te 2.2275730936 1.2860898995 11.5743792150
|
| 56 |
+
Te 0.0000000000 0.0000000000 7.7162528100
|
| 57 |
+
Te 0.0000000000 0.0000000000 0.0000000000
|
| 58 |
+
|
dft/511/runs/agm010191002/relax.out.gz
ADDED
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@@ -0,0 +1,3 @@
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|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:25c9d37d567d059a4bd47e9a60017a3c45f1fbc24dbc513b9629b8c7beca1256
|
| 3 |
+
size 43568
|
dft/511/runs/agm010191002/relaxed.cif
ADDED
|
@@ -0,0 +1,33 @@
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|
| 1 |
+
data_image0
|
| 2 |
+
_chemical_formula_structural Pr4Te4
|
| 3 |
+
_chemical_formula_sum "Pr4 Te4"
|
| 4 |
+
_cell_length_a 4.366221236
|
| 5 |
+
_cell_length_b 4.36622123580212
|
| 6 |
+
_cell_length_c 15.264465269
|
| 7 |
+
_cell_angle_alpha 90.0
|
| 8 |
+
_cell_angle_beta 90.0
|
| 9 |
+
_cell_angle_gamma 119.99999994088893
|
| 10 |
+
|
| 11 |
+
_space_group_name_H-M_alt "P 1"
|
| 12 |
+
_space_group_IT_number 1
|
| 13 |
+
|
| 14 |
+
loop_
|
| 15 |
+
_space_group_symop_operation_xyz
|
| 16 |
+
'x, y, z'
|
| 17 |
+
|
| 18 |
+
loop_
|
| 19 |
+
_atom_site_type_symbol
|
| 20 |
+
_atom_site_label
|
| 21 |
+
_atom_site_symmetry_multiplicity
|
| 22 |
+
_atom_site_fract_x
|
| 23 |
+
_atom_site_fract_y
|
| 24 |
+
_atom_site_fract_z
|
| 25 |
+
_atom_site_occupancy
|
| 26 |
+
Pr Pr1 1.0 0.33333333000011617 0.6666666700165214 0.8806095194634098 1.0000
|
| 27 |
+
Pr Pr2 1.0 0.6666666699902036 0.3333333300099248 0.11939048054314125 1.0000
|
| 28 |
+
Pr Pr3 1.0 0.6666666699902036 0.3333333300099248 0.3806095194568587 1.0000
|
| 29 |
+
Pr Pr4 1.0 0.33333333000011617 0.6666666700165214 0.6193904805496924 1.0000
|
| 30 |
+
Te Te1 1.0 0.33333333000011617 0.6666666700165214 0.25000000000327555 1.0000
|
| 31 |
+
Te Te2 1.0 0.6666666699902036 0.3333333300099248 0.7500000000098267 1.0000
|
| 32 |
+
Te Te3 1.0 0.0 0.0 0.5000000000065511 1.0000
|
| 33 |
+
Te Te4 1.0 0.0 0.0 0.0 1.0000
|
dft/511/runs/agm010191002/scf.in
ADDED
|
@@ -0,0 +1,55 @@
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
&CONTROL
|
| 2 |
+
calculation = 'scf'
|
| 3 |
+
tstress = .true.
|
| 4 |
+
tprnfor = .true.
|
| 5 |
+
outdir = '/opt/dft/jobs/511/runs/agm010191002/tmp'
|
| 6 |
+
prefix = 'scf'
|
| 7 |
+
disk_io = 'low'
|
| 8 |
+
pseudo_dir = '/opt/dft/sssp'
|
| 9 |
+
/
|
| 10 |
+
&SYSTEM
|
| 11 |
+
ecutwfc = 40.0
|
| 12 |
+
ecutrho = 320.0
|
| 13 |
+
occupations = 'smearing'
|
| 14 |
+
degauss = 0.01
|
| 15 |
+
smearing = 'mv'
|
| 16 |
+
ntyp = 2
|
| 17 |
+
nat = 8
|
| 18 |
+
ibrav = 0
|
| 19 |
+
/
|
| 20 |
+
&ELECTRONS
|
| 21 |
+
electron_maxstep = 200
|
| 22 |
+
conv_thr = 1e-08
|
| 23 |
+
mixing_beta = 0.3
|
| 24 |
+
/
|
| 25 |
+
&IONS
|
| 26 |
+
/
|
| 27 |
+
&CELL
|
| 28 |
+
press_conv_thr = 0.5
|
| 29 |
+
/
|
| 30 |
+
&FCP
|
| 31 |
+
/
|
| 32 |
+
&RISM
|
| 33 |
+
/
|
| 34 |
+
ATOMIC_SPECIES
|
| 35 |
+
Pr 140.90766 Pr.GGA-PBE-paw-v1.0.UPF
|
| 36 |
+
Te 127.6 Te_pbe_v1.uspp.F.UPF
|
| 37 |
+
|
| 38 |
+
K_POINTS automatic
|
| 39 |
+
7 7 2 0 0 0
|
| 40 |
+
|
| 41 |
+
CELL_PARAMETERS angstrom
|
| 42 |
+
4.36622123600000 0.00000000000000 0.00000000000000
|
| 43 |
+
-2.18311061400000 3.78125851100000 0.00000000000000
|
| 44 |
+
-0.00000000000000 -0.00000000000000 15.26446526900000
|
| 45 |
+
|
| 46 |
+
ATOMIC_POSITIONS angstrom
|
| 47 |
+
Pr -0.0000000192 2.5208390200 13.4420334254
|
| 48 |
+
Pr 2.1831106411 1.2604194911 1.8224318437
|
| 49 |
+
Pr 2.1831106411 1.2604194911 5.8098007908
|
| 50 |
+
Pr -0.0000000192 2.5208390200 9.4546644783
|
| 51 |
+
Te -0.0000000192 2.5208390200 3.8161163173
|
| 52 |
+
Te 2.1831106411 1.2604194911 11.4483489519
|
| 53 |
+
Te 0.0000000000 0.0000000000 7.6322326346
|
| 54 |
+
Te 0.0000000000 0.0000000000 0.0000000000
|
| 55 |
+
|
dft/511/runs/agm010191002/scf.out.gz
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:b9cc422987a4fe5466fadb7711070481ca1a8fe15b1c27a296a76ad22a8edc5b
|
| 3 |
+
size 7668
|
dft/511/runs/candidate/relax.in
ADDED
|
@@ -0,0 +1,71 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
&CONTROL
|
| 2 |
+
calculation = 'vc-relax'
|
| 3 |
+
nstep = 150
|
| 4 |
+
tstress = .true.
|
| 5 |
+
tprnfor = .true.
|
| 6 |
+
outdir = '/opt/dft/jobs/511/runs/candidate/tmp'
|
| 7 |
+
prefix = 'relax'
|
| 8 |
+
etot_conv_thr = 1e-05
|
| 9 |
+
forc_conv_thr = 0.001
|
| 10 |
+
disk_io = 'low'
|
| 11 |
+
pseudo_dir = '/opt/dft/sssp'
|
| 12 |
+
/
|
| 13 |
+
&SYSTEM
|
| 14 |
+
ecutwfc = 40.0
|
| 15 |
+
ecutrho = 320.0
|
| 16 |
+
occupations = 'smearing'
|
| 17 |
+
degauss = 0.01
|
| 18 |
+
smearing = 'mv'
|
| 19 |
+
ntyp = 3
|
| 20 |
+
nat = 20
|
| 21 |
+
ibrav = 0
|
| 22 |
+
/
|
| 23 |
+
&ELECTRONS
|
| 24 |
+
electron_maxstep = 200
|
| 25 |
+
conv_thr = 1e-07
|
| 26 |
+
mixing_beta = 0.3
|
| 27 |
+
/
|
| 28 |
+
&IONS
|
| 29 |
+
/
|
| 30 |
+
&CELL
|
| 31 |
+
press_conv_thr = 0.5
|
| 32 |
+
/
|
| 33 |
+
&FCP
|
| 34 |
+
/
|
| 35 |
+
&RISM
|
| 36 |
+
/
|
| 37 |
+
ATOMIC_SPECIES
|
| 38 |
+
Tb 158.92535 Tb.GGA-PBE-paw-v1.0.UPF
|
| 39 |
+
Pr 140.90766 Pr.GGA-PBE-paw-v1.0.UPF
|
| 40 |
+
Te 127.6 Te_pbe_v1.uspp.F.UPF
|
| 41 |
+
|
| 42 |
+
K_POINTS automatic
|
| 43 |
+
2 2 3 0 0 0
|
| 44 |
+
|
| 45 |
+
CELL_PARAMETERS angstrom
|
| 46 |
+
10.06099718000000 0.00000000000000 0.00000000000000
|
| 47 |
+
0.00000000000000 10.06099718000000 0.00000000000000
|
| 48 |
+
0.00000000000000 0.00000000000000 6.36480146000000
|
| 49 |
+
|
| 50 |
+
ATOMIC_POSITIONS angstrom
|
| 51 |
+
Tb 5.0304985900 5.0304985900 3.1824007300
|
| 52 |
+
Tb 0.0000000000 0.0000000000 0.0000000000
|
| 53 |
+
Pr 4.1053942255 8.1476630383 0.0000000000
|
| 54 |
+
Pr 1.9133341417 4.1053942255 0.0000000000
|
| 55 |
+
Pr 6.9438327317 9.1358928155 3.1824007300
|
| 56 |
+
Pr 9.1358928155 3.1171644483 3.1824007300
|
| 57 |
+
Pr 3.1171644483 0.9251043645 3.1824007300
|
| 58 |
+
Pr 0.9251043645 6.9438327317 3.1824007300
|
| 59 |
+
Pr 5.9556029545 1.9133341417 0.0000000000
|
| 60 |
+
Pr 8.1476630383 5.9556029545 0.0000000000
|
| 61 |
+
Te 3.9911147793 7.9228314434 3.1824007300
|
| 62 |
+
Te 2.1381657366 3.9911147793 3.1824007300
|
| 63 |
+
Te 7.1686643266 9.0216133693 0.0000000000
|
| 64 |
+
Te 9.0216133693 2.8923328534 0.0000000000
|
| 65 |
+
Te 2.8923328534 1.0393838107 0.0000000000
|
| 66 |
+
Te 1.0393838107 7.1686643266 0.0000000000
|
| 67 |
+
Te 6.0698824007 2.1381657366 3.1824007300
|
| 68 |
+
Te 7.9228314434 6.0698824007 3.1824007300
|
| 69 |
+
Te 5.0304985900 5.0304985900 0.0000000000
|
| 70 |
+
Te 0.0000000000 0.0000000000 3.1824007300
|
| 71 |
+
|
dft/511/runs/candidate/relax.out.gz
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:4a0fa558e1c5a18564dc86447e84322087b97a19bdd8a1ead099e6cf1eff37f5
|
| 3 |
+
size 5938
|
dft/974/novelty.json
ADDED
|
@@ -0,0 +1,43 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"formula": "NaLaTe2",
|
| 3 |
+
"checked_at": "2026-11-03 14:21:58",
|
| 4 |
+
"databases": {
|
| 5 |
+
"Alexandria PBEsol": [
|
| 6 |
+
"agm002166439",
|
| 7 |
+
"agm002347294"
|
| 8 |
+
],
|
| 9 |
+
"Alexandria PBE": [
|
| 10 |
+
"agm001216710",
|
| 11 |
+
"agm001812197",
|
| 12 |
+
"agm002166439",
|
| 13 |
+
"agm002166440",
|
| 14 |
+
"agm002347294",
|
| 15 |
+
"agm002774289",
|
| 16 |
+
"agm002774290",
|
| 17 |
+
"agm002866446",
|
| 18 |
+
"agm005115025",
|
| 19 |
+
"agm013153765"
|
| 20 |
+
],
|
| 21 |
+
"mcloudarchive/ed-g2": [
|
| 22 |
+
"agm002166439"
|
| 23 |
+
]
|
| 24 |
+
},
|
| 25 |
+
"literature": [],
|
| 26 |
+
"errors": [
|
| 27 |
+
"MPDS: Expecting value: line 1 column 1 (char 0)",
|
| 28 |
+
"OQMD: HTTPSConnectionPool(host='oqmd.org', port=443): Read timed out. (read timeout=90)"
|
| 29 |
+
],
|
| 30 |
+
"unavailable": [
|
| 31 |
+
"aflow/aflow: HTTPSConnectionPool(host='aflow.org', port=443): Max retries exceeded with url: /API/optimade/v1/str",
|
| 32 |
+
"tcod/tcod: ('Connection aborted.', RemoteDisconnected('Remote end closed connection without response'))",
|
| 33 |
+
"atomgpt/jarvis-dft: HTTP 503",
|
| 34 |
+
"nmd/nmd: HTTP 500",
|
| 35 |
+
"cmr/cmr: HTTPSConnectionPool(host='cmr-optimade.fysik.dtu.dk', port=443): Max retries exceeded with url: /v1/",
|
| 36 |
+
"mpdd/mpdd: HTTPConnectionPool(host='mpddoptimade.phaseslab.org', port=80): Read timed out. (read timeout=25)",
|
| 37 |
+
"mpod/mpod: HTTPConnectionPool(host='mpod_optimade.cimav.edu.mx', port=80): Max retries exceeded with url: /v1/s",
|
| 38 |
+
"matterverse/matterverse: HTTPSConnectionPool(host='optimade.matterverse.ai', port=443): Read timed out. (read timeout=25)"
|
| 39 |
+
],
|
| 40 |
+
"spellings_searched": 6,
|
| 41 |
+
"sources_checked": 27,
|
| 42 |
+
"verdict": "found"
|
| 43 |
+
}
|
dft/974/runs/agm002166439/relax.in
ADDED
|
@@ -0,0 +1,55 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
&CONTROL
|
| 2 |
+
calculation = 'vc-relax'
|
| 3 |
+
nstep = 150
|
| 4 |
+
tstress = .true.
|
| 5 |
+
tprnfor = .true.
|
| 6 |
+
outdir = '/opt/dft/jobs/974/runs/agm002166439/tmp'
|
| 7 |
+
prefix = 'relax'
|
| 8 |
+
etot_conv_thr = 1e-05
|
| 9 |
+
forc_conv_thr = 0.001
|
| 10 |
+
disk_io = 'low'
|
| 11 |
+
pseudo_dir = '/opt/dft/sssp'
|
| 12 |
+
/
|
| 13 |
+
&SYSTEM
|
| 14 |
+
ecutwfc = 40.0
|
| 15 |
+
ecutrho = 320.0
|
| 16 |
+
occupations = 'smearing'
|
| 17 |
+
degauss = 0.01
|
| 18 |
+
smearing = 'mv'
|
| 19 |
+
ntyp = 3
|
| 20 |
+
nat = 4
|
| 21 |
+
ibrav = 0
|
| 22 |
+
/
|
| 23 |
+
&ELECTRONS
|
| 24 |
+
electron_maxstep = 200
|
| 25 |
+
conv_thr = 1e-07
|
| 26 |
+
mixing_beta = 0.3
|
| 27 |
+
/
|
| 28 |
+
&IONS
|
| 29 |
+
/
|
| 30 |
+
&CELL
|
| 31 |
+
press_conv_thr = 0.5
|
| 32 |
+
/
|
| 33 |
+
&FCP
|
| 34 |
+
/
|
| 35 |
+
&RISM
|
| 36 |
+
/
|
| 37 |
+
ATOMIC_SPECIES
|
| 38 |
+
Na 22.98976928 na_pbe_v1.5.uspp.F.UPF
|
| 39 |
+
Te 127.6 Te_pbe_v1.uspp.F.UPF
|
| 40 |
+
La 138.90547 La.GGA-PBE-paw-v1.0.UPF
|
| 41 |
+
|
| 42 |
+
K_POINTS automatic
|
| 43 |
+
4 4 3 0 0 0
|
| 44 |
+
|
| 45 |
+
CELL_PARAMETERS angstrom
|
| 46 |
+
4.65190899000000 0.00000000000000 0.00000000000000
|
| 47 |
+
2.32595448798230 4.02856946284027 0.00000000000000
|
| 48 |
+
2.32595449075720 1.34084312995916 7.49553515306748
|
| 49 |
+
|
| 50 |
+
ATOMIC_POSITIONS angstrom
|
| 51 |
+
Na 0.0000000000 0.0000000000 0.0000000000
|
| 52 |
+
Te 2.3259544922 1.3425149341 1.9380805733
|
| 53 |
+
Te 6.9778634766 4.0268976587 5.5574545797
|
| 54 |
+
La 4.6519089844 2.6847062964 3.7477675765
|
| 55 |
+
|
dft/974/runs/agm002166439/relax.out.gz
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:4345dd2b05a7b4556673e38d280caf652715ed3c74abb322884eaa16fc3c7b33
|
| 3 |
+
size 5233
|
dft_results.csv
CHANGED
|
@@ -1,10 +1,10 @@
|
|
| 1 |
-
lab_id,formula,dft_status,e_hull_dft_eV_atom,decomposes_to,pbe_gap_eV,metal,phonon_stable,finished,note
|
| 2 |
-
511,TbPr4Te5,
|
| 3 |
-
974,NaLaTe2,
|
| 4 |
-
1501,Mg3Ni3GeP2,fail,0.1004,"{""Mg3P2"": 0.2941, ""Mg4Ni7Ge6"": 0.2222, ""NiGe"": 0.0654, ""MgNi2P"": 0.4183}",,,,2026-10-29T07:29:09Z,
|
| 5 |
-
1856,SrCaCdP2,pass,-0.024,"{""Ca2CdP2"": 0.5, ""Sr2CdP2"": 0.5}",1.122,False,,2026-10-29T14:26:16Z,re-checked vs beta-Ca2CdP2 (CCDC 2054635): beta is +7.6 meV/atom vs alpha; hull uses the lower form
|
| 6 |
-
2087,Ac4PrTe5,
|
| 7 |
-
2322,Rb2CdCuF6,
|
| 8 |
-
2571,BaCdGePd2,pass,0.003,"{""BaGePd"": 0.6, ""CdPd"": 0.4}",,,,2026-11-01T22:38:42Z,
|
| 9 |
-
3896,Rb2B4Pt3,fail,0.2063,"{""RbBPt"": 0.6667, ""BPt2"": 0.1667, ""B"": 0.1667}",,,,2026-10-28T18:51:29Z,"stopped by hand at vc-relax step 48 (forces 0.006 Ry/bohr, energy falling <0.0001 eV/atom/step); coarse-k energy, no final scf; 8x the 0.025 pass margin"
|
| 10 |
-
4665,KTlAgCl3,
|
|
|
|
| 1 |
+
lab_id,formula,dft_status,e_hull_dft_eV_atom,decomposes_to,pbe_gap_eV,metal,phonon_stable,prior_reports,finished,note
|
| 2 |
+
511,TbPr4Te5,withdrawn,,,,,,Alexandria PBE:agm003653003; nmd/nmd:Urw0sfCTuOAlCT1XYDA71eGoXVex|cE83Tcq8nFHhpkC3JdTaQt5kAjFx|e6VNa3HJ5qiGwqFRC80Nb8oxRBUn|jAVfwjYU9g0k0RAp1JlBaZ9K4h09,,"already reported: Alexandria PBE agm003653003 + NOMAD (4); held 2026-11-03 mid-run, cached runs in jobs/.held-511"
|
| 3 |
+
974,NaLaTe2,withdrawn,,,,,,Alexandria PBEsol:agm002166439|agm002347294; Alexandria PBE:agm001216710|agm001812197|agm002166439|agm002166440|agm002347294|agm002774289|agm002774290|agm002866446|agm005115025|agm013153765; mcloudarchive/ed-g2:agm002166439,,"already reported: Alexandria PBE (10), PBEsol (2), Materials Cloud archive (1); held 2026-11-03, see priorart/974.json"
|
| 4 |
+
1501,Mg3Ni3GeP2,fail,0.1004,"{""Mg3P2"": 0.2941, ""Mg4Ni7Ge6"": 0.2222, ""NiGe"": 0.0654, ""MgNi2P"": 0.4183}",,,,,2026-10-29T07:29:09Z,
|
| 5 |
+
1856,SrCaCdP2,pass,-0.024,"{""Ca2CdP2"": 0.5, ""Sr2CdP2"": 0.5}",1.122,False,,OQMD:5875226|5879242,2026-10-29T14:26:16Z,re-checked vs beta-Ca2CdP2 (CCDC 2054635): beta is +7.6 meV/atom vs alpha; hull uses the lower form
|
| 6 |
+
2087,Ac4PrTe5,withdrawn,,,,,,Alexandria PBE:agm003652990|agm006101667|agm058583557; OQMD:6194574,,no SSSP pseudopotential for Ac (crash-looped run_dft 2026-11-03); moved to jobs/.held-2087
|
| 7 |
+
2322,Rb2CdCuF6,withdrawn,,,,,,Alexandria PBE:agm004484548; nmd/nmd:R66wB7kxsaJ22uMKSLs_amVbMhtZ; OQMD:5928887,,"already reported: Alexandria PBE (1), OQMD (1), NOMAD (1); held 2026-11-03, see priorart/2322.json"
|
| 8 |
+
2571,BaCdGePd2,pass,0.003,"{""BaGePd"": 0.6, ""CdPd"": 0.4}",0.0,True,,,2026-11-01T22:38:42Z,
|
| 9 |
+
3896,Rb2B4Pt3,fail,0.2063,"{""RbBPt"": 0.6667, ""BPt2"": 0.1667, ""B"": 0.1667}",,,,,2026-10-28T18:51:29Z,"stopped by hand at vc-relax step 48 (forces 0.006 Ry/bohr, energy falling <0.0001 eV/atom/step); coarse-k energy, no final scf; 8x the 0.025 pass margin"
|
| 10 |
+
4665,KTlAgCl3,withdrawn,,,,,,Alexandria PBE:agm005026840; nmd/nmd:RwiHcKfUTBNE_JdvaKRBR75M_QH4|VGtU-RtoJB-3yf3PPSXgme9MdsAO|ZINukU2EdbjyliSyHzLxV5RWLrUL|jXVPbCVeYg0ZYR9dfXPHRjo041CU,,"already reported: Alexandria PBE (1), NOMAD (4); held 2026-11-03 before start, see priorart/4665.json"
|
stats.json
CHANGED
|
@@ -1,22 +1,22 @@
|
|
| 1 |
{
|
| 2 |
-
"built": "2026-11-
|
| 3 |
-
"structures":
|
| 4 |
-
"catalogued":
|
| 5 |
"ml_verdicts": {
|
| 6 |
-
"borderline":
|
| 7 |
-
"falls apart":
|
| 8 |
-
"plausible":
|
| 9 |
-
"rock solid":
|
| 10 |
-
"unstable":
|
| 11 |
},
|
| 12 |
"novelty": {
|
| 13 |
-
"skipped":
|
| 14 |
-
"known":
|
| 15 |
-
"new composition":
|
| 16 |
-
"
|
| 17 |
"rediscovered": 5
|
| 18 |
},
|
| 19 |
-
"ml_hull_done":
|
| 20 |
"ml_hull_at_or_below_0": 0,
|
| 21 |
"dft_jobs": 9,
|
| 22 |
"dft_pass": 2,
|
|
@@ -24,50 +24,65 @@
|
|
| 24 |
"by_prompt_mode": {
|
| 25 |
"surprise (before 11-01)": {
|
| 26 |
"structures": 1681,
|
| 27 |
-
"new":
|
| 28 |
"dft_pass": 2,
|
| 29 |
-
"
|
| 30 |
-
"
|
| 31 |
-
"
|
|
|
|
| 32 |
},
|
| 33 |
"human": {
|
| 34 |
"structures": 10,
|
| 35 |
"new": 0,
|
| 36 |
"dft_pass": 0,
|
|
|
|
| 37 |
"hull_checked": 0,
|
| 38 |
"median_e_hull": null,
|
| 39 |
"within_0_05": 0
|
| 40 |
},
|
| 41 |
"random formula (before 11-01)": {
|
| 42 |
"structures": 3713,
|
| 43 |
-
"new":
|
| 44 |
"dft_pass": 0,
|
| 45 |
-
"
|
| 46 |
-
"
|
| 47 |
-
"
|
|
|
|
| 48 |
},
|
| 49 |
"surprise": {
|
| 50 |
-
"structures":
|
| 51 |
-
"new":
|
| 52 |
"dft_pass": 0,
|
|
|
|
| 53 |
"hull_checked": 0,
|
| 54 |
"median_e_hull": null,
|
| 55 |
"within_0_05": 0
|
| 56 |
},
|
| 57 |
"random": {
|
| 58 |
-
"structures":
|
| 59 |
-
"new":
|
| 60 |
"dft_pass": 0,
|
| 61 |
-
"
|
| 62 |
-
"
|
|
|
|
| 63 |
"within_0_05": 0
|
| 64 |
},
|
| 65 |
"substitution": {
|
| 66 |
-
"structures":
|
| 67 |
-
"new":
|
| 68 |
"dft_pass": 0,
|
| 69 |
-
"
|
| 70 |
-
"
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 71 |
"within_0_05": 0
|
| 72 |
}
|
| 73 |
}
|
|
|
|
| 1 |
{
|
| 2 |
+
"built": "2026-11-03",
|
| 3 |
+
"structures": 5546,
|
| 4 |
+
"catalogued": 958,
|
| 5 |
"ml_verdicts": {
|
| 6 |
+
"borderline": 743,
|
| 7 |
+
"falls apart": 168,
|
| 8 |
+
"plausible": 1251,
|
| 9 |
+
"rock solid": 1366,
|
| 10 |
+
"unstable": 2018
|
| 11 |
},
|
| 12 |
"novelty": {
|
| 13 |
+
"skipped": 2929,
|
| 14 |
+
"known": 969,
|
| 15 |
+
"new composition": 958,
|
| 16 |
+
"known composition": 685,
|
| 17 |
"rediscovered": 5
|
| 18 |
},
|
| 19 |
+
"ml_hull_done": 596,
|
| 20 |
"ml_hull_at_or_below_0": 0,
|
| 21 |
"dft_jobs": 9,
|
| 22 |
"dft_pass": 2,
|
|
|
|
| 24 |
"by_prompt_mode": {
|
| 25 |
"surprise (before 11-01)": {
|
| 26 |
"structures": 1681,
|
| 27 |
+
"new": 107,
|
| 28 |
"dft_pass": 2,
|
| 29 |
+
"known_skipped": 0,
|
| 30 |
+
"hull_checked": 53,
|
| 31 |
+
"median_e_hull": 0.141,
|
| 32 |
+
"within_0_05": 6
|
| 33 |
},
|
| 34 |
"human": {
|
| 35 |
"structures": 10,
|
| 36 |
"new": 0,
|
| 37 |
"dft_pass": 0,
|
| 38 |
+
"known_skipped": 0,
|
| 39 |
"hull_checked": 0,
|
| 40 |
"median_e_hull": null,
|
| 41 |
"within_0_05": 0
|
| 42 |
},
|
| 43 |
"random formula (before 11-01)": {
|
| 44 |
"structures": 3713,
|
| 45 |
+
"new": 825,
|
| 46 |
"dft_pass": 0,
|
| 47 |
+
"known_skipped": 0,
|
| 48 |
+
"hull_checked": 541,
|
| 49 |
+
"median_e_hull": 0.386,
|
| 50 |
+
"within_0_05": 0
|
| 51 |
},
|
| 52 |
"surprise": {
|
| 53 |
+
"structures": 55,
|
| 54 |
+
"new": 3,
|
| 55 |
"dft_pass": 0,
|
| 56 |
+
"known_skipped": 1,
|
| 57 |
"hull_checked": 0,
|
| 58 |
"median_e_hull": null,
|
| 59 |
"within_0_05": 0
|
| 60 |
},
|
| 61 |
"random": {
|
| 62 |
+
"structures": 19,
|
| 63 |
+
"new": 1,
|
| 64 |
"dft_pass": 0,
|
| 65 |
+
"known_skipped": 0,
|
| 66 |
+
"hull_checked": 0,
|
| 67 |
+
"median_e_hull": null,
|
| 68 |
"within_0_05": 0
|
| 69 |
},
|
| 70 |
"substitution": {
|
| 71 |
+
"structures": 67,
|
| 72 |
+
"new": 22,
|
| 73 |
"dft_pass": 0,
|
| 74 |
+
"known_skipped": 0,
|
| 75 |
+
"hull_checked": 2,
|
| 76 |
+
"median_e_hull": 0.272,
|
| 77 |
+
"within_0_05": 0
|
| 78 |
+
},
|
| 79 |
+
"control": {
|
| 80 |
+
"structures": 1,
|
| 81 |
+
"new": 0,
|
| 82 |
+
"dft_pass": 0,
|
| 83 |
+
"known_skipped": 0,
|
| 84 |
+
"hull_checked": 0,
|
| 85 |
+
"median_e_hull": null,
|
| 86 |
"within_0_05": 0
|
| 87 |
}
|
| 88 |
}
|
structures.csv
CHANGED
|
The diff for this file is too large to render.
See raw diff
|
|
|
structures.jsonl.gz
CHANGED
|
@@ -1,3 +1,3 @@
|
|
| 1 |
version https://git-lfs.github.com/spec/v1
|
| 2 |
-
oid sha256:
|
| 3 |
-
size
|
|
|
|
| 1 |
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:4eaeb41e74871beab105b5041902fc1918e41718581a2057a73ac48f3c2a48c8
|
| 3 |
+
size 1256830
|