data: 5402 structures, 8 DFT jobs
Browse filesThis view is limited to 50 files because it contains too many changes. See raw diff
- ATTRIBUTION.md +19 -0
- LICENSE +396 -0
- METHODS.md +52 -0
- build.log +8 -0
- dft/1501/candidate.cif +35 -0
- dft/1501/comp/agm003220761.cif +42 -0
- dft/1501/comp/agm003263418.cif +34 -0
- dft/1501/comp/agm003272104.cif +66 -0
- dft/1501/comp/agm016490948.cif +43 -0
- dft/1501/competitors.json +31 -0
- dft/1501/result.json +15 -0
- dft/1501/runs/agm003220761/energy.json +8 -0
- dft/1501/runs/agm003220761/relax.in +71 -0
- dft/1501/runs/agm003220761/relax.out.gz +3 -0
- dft/1501/runs/agm003220761/relaxed.cif +41 -0
- dft/1501/runs/agm003220761/scf.in +68 -0
- dft/1501/runs/agm003220761/scf.out.gz +3 -0
- dft/1501/runs/agm003263418/energy.json +8 -0
- dft/1501/runs/agm003263418/relax.in +61 -0
- dft/1501/runs/agm003263418/relax.out.gz +3 -0
- dft/1501/runs/agm003263418/relaxed.cif +33 -0
- dft/1501/runs/agm003263418/scf.in +58 -0
- dft/1501/runs/agm003263418/scf.out.gz +3 -0
- dft/1501/runs/agm003272104/energy.json +8 -0
- dft/1501/runs/agm003272104/relax.in +90 -0
- dft/1501/runs/agm003272104/relax.out.gz +3 -0
- dft/1501/runs/agm003272104/relaxed.cif +65 -0
- dft/1501/runs/agm003272104/scf.in +87 -0
- dft/1501/runs/agm003272104/scf.out.gz +3 -0
- dft/1501/runs/agm016490948/energy.json +8 -0
- dft/1501/runs/agm016490948/relax.in +72 -0
- dft/1501/runs/agm016490948/relax.out.gz +3 -0
- dft/1501/runs/agm016490948/relaxed.cif +42 -0
- dft/1501/runs/agm016490948/scf.in +69 -0
- dft/1501/runs/agm016490948/scf.out.gz +3 -0
- dft/1501/runs/candidate/energy.json +8 -0
- dft/1501/runs/candidate/relax.in +66 -0
- dft/1501/runs/candidate/relax.out.gz +3 -0
- dft/1501/runs/candidate/relaxed.cif +34 -0
- dft/1501/runs/candidate/scf.in +63 -0
- dft/1501/runs/candidate/scf.out.gz +3 -0
- dft/1856/beta_check.json +14 -0
- dft/1856/candidate.cif +46 -0
- dft/1856/comp/agm002177972.cif +36 -0
- dft/1856/comp/agm003206316.cif +36 -0
- dft/1856/competitors.json +19 -0
- dft/1856/input_tmp.in +0 -0
- dft/1856/job.json +1 -0
- dft/1856/phonon/d000/forces.npy +3 -0
- dft/1856/phonon/d000/scf.in +88 -0
ATTRIBUTION.md
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# Attribution
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- **Alexandria** materials database: J. Schmidt et al., "Machine-learning-assisted determination of the global
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zero-temperature phase diagram of materials", Adv. Mater. 35, 2210788 (2023), and related releases.
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https://alexandria.icams.rub.de (CC BY 4.0). Competitor structures in `dft/*/comp/` and their relaxed versions in
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`dft/*/runs/agm*/` are derived from Alexandria entries with the IDs used as file names.
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- **Materials Project**: A. Jain et al., APL Materials 1, 011002 (2013). https://materialsproject.org (CC BY 4.0).
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Used for novelty matching; IDs only.
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- **CrystaLLM**: L. M. Antunes, K. T. Butler, R. Grau-Crespo, "Crystal structure generation with autoregressive
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large language modeling", Nat. Commun. 15, 10570 (2024).
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- **MACE**: I. Batatia et al., "MACE: Higher order equivariant message passing neural networks for fast and
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accurate force fields", NeurIPS 2022; foundation model: Batatia et al., arXiv:2401.00096.
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- **Quantum ESPRESSO**: P. Giannozzi et al., J. Phys.: Condens. Matter 29, 465901 (2017).
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- **SSSP**: G. Prandini et al., npj Comput. Mater. 4, 72 (2018). Not redistributed.
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- **phonopy**: A. Togo, J. Phys. Soc. Jpn. 92, 012001 (2023).
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- **pymatgen**: S. P. Ong et al., Comput. Mater. Sci. 68, 314 (2013).
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- **OPTIMADE**: C. W. Andersen et al., Sci. Data 8, 217 (2021).
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- Checked but not redistributed: beta-Ca2CdP2, CCDC deposition 2054635 (used as an extra competitor for lab id
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1856; only the resulting energy difference is published).
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LICENSE
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Attribution 4.0 International
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=======================================================================
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|
METHODS.md
ADDED
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|
|
| 1 |
+
# Methods
|
| 2 |
+
|
| 3 |
+
## 1. Generation
|
| 4 |
+
Structures come from **CrystaLLM** (a language model trained on CIF files), prompted with a composition. Most
|
| 5 |
+
prompts are picked automatically ("autopilot"); a few were typed by a person. `origin` and `prompt` record which.
|
| 6 |
+
|
| 7 |
+
## 2. ML screen
|
| 8 |
+
Each structure is relaxed with **MACE** (float64). The verdict comes from the formation energy relative to the
|
| 9 |
+
elements and from how much the cell changed in relaxation:
|
| 10 |
+
`rock solid` / `plausible` / `borderline` / `unstable` / `falls apart`.
|
| 11 |
+
|
| 12 |
+
## 3. Novelty
|
| 13 |
+
Composition and structure are matched (pymatgen StructureMatcher) against a local index of known structures and,
|
| 14 |
+
since 2026-10-28, live against **Materials Project** and **Alexandria** via OPTIMADE. `known` and `rediscovered`
|
| 15 |
+
records include the matching ID. Before 2026-10-28 only the local index was used, which missed some known
|
| 16 |
+
compounds; affected records were re-audited.
|
| 17 |
+
|
| 18 |
+
## 4. ML convex hull
|
| 19 |
+
Nightly, catalogued structures get an energy above the hull: MACE energies of the candidate vs MACE-relaxed
|
| 20 |
+
Alexandria phases near the hull in the same chemical system. `decomposes_to` lists the hull products and
|
| 21 |
+
fractions. Values below about -0.15 eV/atom are flagged `suspect` (almost always an ML artefact).
|
| 22 |
+
|
| 23 |
+
## 5. DFT re-check
|
| 24 |
+
Candidates with ML e_hull ≤ 0.025 eV/atom and ≤ 30 atoms go to DFT, together with their decomposition products
|
| 25 |
+
on **Alexandria's PBE hull** (≤ 64 atoms each).
|
| 26 |
+
|
| 27 |
+
- Code: Quantum ESPRESSO 6.7, PBE, SSSP 1.1.2 efficiency pseudopotentials; cutoffs = max over the elements of the
|
| 28 |
+
SSSP-recommended wavefunction/charge cutoffs.
|
| 29 |
+
- Smearing: Marzari-Vanderbilt, 0.01 Ry. Spin: non-magnetic, except systems containing Fe/Co/Ni/Mn/Cr, which
|
| 30 |
+
are run spin-polarised from a 2 μB start on those atoms.
|
| 31 |
+
- Each structure: `vc-relax` on a coarse k-grid (spacing 0.4 Å⁻¹; forces 1e-3 Ry/bohr, pressure 0.5 kbar),
|
| 32 |
+
then an `scf` on a finer grid (0.25 Å⁻¹, conv_thr 1e-7). Energies come from the final scf only.
|
| 33 |
+
- Candidate and competitors are computed with identical settings, so the hull is internally consistent.
|
| 34 |
+
- **Pass**: e_hull ≤ 0.025 eV/atom. That margin is about the size of PBE's typical error and of entropy at room
|
| 35 |
+
temperature; a pass means "worth a closer look", nothing more.
|
| 36 |
+
- Some jobs carry a `note` (e.g. a relaxation stopped by hand when it was clearly not going to pass, or an
|
| 37 |
+
extra competitor checked afterwards). Read it before using the number.
|
| 38 |
+
|
| 39 |
+
## 6. Properties (passes only)
|
| 40 |
+
PBE band gap and density of states at the Fermi level; elastic tensor from ±1% strains in the six Voigt directions (ions relaxed at
|
| 41 |
+
fixed cell), with Born stability check. PBE underestimates band gaps, often by a factor of ~2.
|
| 42 |
+
|
| 43 |
+
## 7. Phonons (passes only)
|
| 44 |
+
phonopy finite displacements on a supercell with every side ≥ 7 Å, after a tight fixed-cell relaxation;
|
| 45 |
+
frequencies on a 10×10×10 mesh. Any mode softer than -0.1 THz away from the Γ acoustic modes = unstable. The
|
| 46 |
+
supercell is small, so long-wavelength instabilities can be missed.
|
| 47 |
+
|
| 48 |
+
## Known limits
|
| 49 |
+
- Hulls only include competitors that exist in Alexandria (and, for the ML hull, phases near its hull). A missing
|
| 50 |
+
competitor can make a candidate look more stable than it is.
|
| 51 |
+
- PBE alone; no van der Waals, no Hubbard U, no finite-temperature free energies.
|
| 52 |
+
- Pass ≠ synthesisable. No candidate here has been made in a lab.
|
build.log
ADDED
|
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|
| 1 |
+
excluded (restricted source) dft/1856/comp/beta_Ca2CdP2_CCDC2054635.cif
|
| 2 |
+
excluded (restricted source) dft/1856/comp/beta_Ca2CdP2_prim.cif
|
| 3 |
+
excluded (restricted source) dft/1856/runs/beta_Ca2CdP2/energy.json
|
| 4 |
+
excluded (restricted source) dft/1856/runs/beta_Ca2CdP2/relax.in
|
| 5 |
+
excluded (restricted source) dft/1856/runs/beta_Ca2CdP2/relax.out
|
| 6 |
+
excluded (restricted source) dft/1856/runs/beta_Ca2CdP2/relaxed.cif
|
| 7 |
+
excluded (restricted source) dft/1856/runs/beta_Ca2CdP2/scf.in
|
| 8 |
+
excluded (restricted source) dft/1856/runs/beta_Ca2CdP2/scf.out
|
dft/1501/candidate.cif
ADDED
|
@@ -0,0 +1,35 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
# generated using pymatgen
|
| 2 |
+
data_Mg3Ni3GeP2
|
| 3 |
+
_symmetry_space_group_name_H-M 'P 1'
|
| 4 |
+
_cell_length_a 6.13814141
|
| 5 |
+
_cell_length_b 6.13814141
|
| 6 |
+
_cell_length_c 3.85104355
|
| 7 |
+
_cell_angle_alpha 90.00000000
|
| 8 |
+
_cell_angle_beta 90.00000000
|
| 9 |
+
_cell_angle_gamma 120.00000000
|
| 10 |
+
_symmetry_Int_Tables_number 1
|
| 11 |
+
_chemical_formula_structural Mg3Ni3GeP2
|
| 12 |
+
_chemical_formula_sum 'Mg3 Ni3 Ge1 P2'
|
| 13 |
+
_cell_volume 125.65588706
|
| 14 |
+
_cell_formula_units_Z 1
|
| 15 |
+
loop_
|
| 16 |
+
_symmetry_equiv_pos_site_id
|
| 17 |
+
_symmetry_equiv_pos_as_xyz
|
| 18 |
+
1 'x, y, z'
|
| 19 |
+
loop_
|
| 20 |
+
_atom_site_type_symbol
|
| 21 |
+
_atom_site_label
|
| 22 |
+
_atom_site_symmetry_multiplicity
|
| 23 |
+
_atom_site_fract_x
|
| 24 |
+
_atom_site_fract_y
|
| 25 |
+
_atom_site_fract_z
|
| 26 |
+
_atom_site_occupancy
|
| 27 |
+
Mg Mg0 1 0.56332615 0.56332615 0.00000000 1
|
| 28 |
+
Mg Mg1 1 0.00000000 0.43667385 0.00000000 1
|
| 29 |
+
Mg Mg2 1 0.43667385 0.00000000 0.00000000 1
|
| 30 |
+
Ni Ni3 1 0.25017266 0.25017266 0.50000000 1
|
| 31 |
+
Ni Ni4 1 0.00000000 0.74982734 0.50000000 1
|
| 32 |
+
Ni Ni5 1 0.74982734 0.00000000 0.50000000 1
|
| 33 |
+
Ge Ge6 1 0.00000000 0.00000000 0.00000000 1
|
| 34 |
+
P P7 1 0.66666667 0.33333333 0.50000000 1
|
| 35 |
+
P P8 1 0.33333333 0.66666667 0.50000000 1
|
dft/1501/comp/agm003220761.cif
ADDED
|
@@ -0,0 +1,42 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
# generated using pymatgen
|
| 2 |
+
data_MgNi2P
|
| 3 |
+
_symmetry_space_group_name_H-M 'P 1'
|
| 4 |
+
_cell_length_a 5.02512877
|
| 5 |
+
_cell_length_b 6.35631350
|
| 6 |
+
_cell_length_c 6.45362395
|
| 7 |
+
_cell_angle_alpha 90.00000000
|
| 8 |
+
_cell_angle_beta 90.00000000
|
| 9 |
+
_cell_angle_gamma 90.00000000
|
| 10 |
+
_symmetry_Int_Tables_number 1
|
| 11 |
+
_chemical_formula_structural MgNi2P
|
| 12 |
+
_chemical_formula_sum 'Mg4 Ni8 P4'
|
| 13 |
+
_cell_volume 206.13709892
|
| 14 |
+
_cell_formula_units_Z 4
|
| 15 |
+
loop_
|
| 16 |
+
_symmetry_equiv_pos_site_id
|
| 17 |
+
_symmetry_equiv_pos_as_xyz
|
| 18 |
+
1 'x, y, z'
|
| 19 |
+
loop_
|
| 20 |
+
_atom_site_type_symbol
|
| 21 |
+
_atom_site_label
|
| 22 |
+
_atom_site_symmetry_multiplicity
|
| 23 |
+
_atom_site_fract_x
|
| 24 |
+
_atom_site_fract_y
|
| 25 |
+
_atom_site_fract_z
|
| 26 |
+
_atom_site_occupancy
|
| 27 |
+
Mg Mg0 1 0.87393780 0.75000000 0.51847958 1
|
| 28 |
+
Mg Mg1 1 0.37393780 0.25000000 0.98152042 1
|
| 29 |
+
Mg Mg2 1 0.12606220 0.25000000 0.48152042 1
|
| 30 |
+
Mg Mg3 1 0.62606220 0.75000000 0.01847958 1
|
| 31 |
+
Ni Ni4 1 0.09988630 0.55302637 0.17508438 1
|
| 32 |
+
Ni Ni5 1 0.59988630 0.44697363 0.32491562 1
|
| 33 |
+
Ni Ni6 1 0.90011370 0.05302637 0.82491562 1
|
| 34 |
+
Ni Ni7 1 0.40011370 0.94697363 0.67508438 1
|
| 35 |
+
Ni Ni8 1 0.90011370 0.44697363 0.82491562 1
|
| 36 |
+
Ni Ni9 1 0.40011370 0.55302637 0.67508438 1
|
| 37 |
+
Ni Ni10 1 0.09988630 0.94697363 0.17508438 1
|
| 38 |
+
Ni Ni11 1 0.59988630 0.05302637 0.32491562 1
|
| 39 |
+
P P12 1 0.12297403 0.75000000 0.87412679 1
|
| 40 |
+
P P13 1 0.62297403 0.25000000 0.62587321 1
|
| 41 |
+
P P14 1 0.87702597 0.25000000 0.12587321 1
|
| 42 |
+
P P15 1 0.37702597 0.75000000 0.37412679 1
|
dft/1501/comp/agm003263418.cif
ADDED
|
@@ -0,0 +1,34 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
# generated using pymatgen
|
| 2 |
+
data_NiGe
|
| 3 |
+
_symmetry_space_group_name_H-M 'P 1'
|
| 4 |
+
_cell_length_a 3.41606205
|
| 5 |
+
_cell_length_b 5.46176131
|
| 6 |
+
_cell_length_c 5.87313529
|
| 7 |
+
_cell_angle_alpha 90.00000000
|
| 8 |
+
_cell_angle_beta 90.00000000
|
| 9 |
+
_cell_angle_gamma 90.00000000
|
| 10 |
+
_symmetry_Int_Tables_number 1
|
| 11 |
+
_chemical_formula_structural NiGe
|
| 12 |
+
_chemical_formula_sum 'Ni4 Ge4'
|
| 13 |
+
_cell_volume 109.57928755
|
| 14 |
+
_cell_formula_units_Z 4
|
| 15 |
+
loop_
|
| 16 |
+
_symmetry_equiv_pos_site_id
|
| 17 |
+
_symmetry_equiv_pos_as_xyz
|
| 18 |
+
1 'x, y, z'
|
| 19 |
+
loop_
|
| 20 |
+
_atom_site_type_symbol
|
| 21 |
+
_atom_site_label
|
| 22 |
+
_atom_site_symmetry_multiplicity
|
| 23 |
+
_atom_site_fract_x
|
| 24 |
+
_atom_site_fract_y
|
| 25 |
+
_atom_site_fract_z
|
| 26 |
+
_atom_site_occupancy
|
| 27 |
+
Ni Ni0 1 0.25000000 0.50496329 0.68922914 1
|
| 28 |
+
Ni Ni1 1 0.75000000 0.49503671 0.31077086 1
|
| 29 |
+
Ni Ni2 1 0.25000000 0.00496329 0.81077086 1
|
| 30 |
+
Ni Ni3 1 0.75000000 0.99503671 0.18922914 1
|
| 31 |
+
Ge Ge4 1 0.25000000 0.68964914 0.08411024 1
|
| 32 |
+
Ge Ge5 1 0.75000000 0.31035086 0.91588976 1
|
| 33 |
+
Ge Ge6 1 0.25000000 0.18964914 0.41588976 1
|
| 34 |
+
Ge Ge7 1 0.75000000 0.81035086 0.58411024 1
|
dft/1501/comp/agm003272104.cif
ADDED
|
@@ -0,0 +1,66 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
# generated using pymatgen
|
| 2 |
+
data_Mg3P2
|
| 3 |
+
_symmetry_space_group_name_H-M 'P 1'
|
| 4 |
+
_cell_length_a 10.45088516
|
| 5 |
+
_cell_length_b 10.45088516
|
| 6 |
+
_cell_length_c 10.45088516
|
| 7 |
+
_cell_angle_alpha 109.47122061
|
| 8 |
+
_cell_angle_beta 109.47122065
|
| 9 |
+
_cell_angle_gamma 109.47122065
|
| 10 |
+
_symmetry_Int_Tables_number 1
|
| 11 |
+
_chemical_formula_structural Mg3P2
|
| 12 |
+
_chemical_formula_sum 'Mg24 P16'
|
| 13 |
+
_cell_volume 878.69334191
|
| 14 |
+
_cell_formula_units_Z 8
|
| 15 |
+
loop_
|
| 16 |
+
_symmetry_equiv_pos_site_id
|
| 17 |
+
_symmetry_equiv_pos_as_xyz
|
| 18 |
+
1 'x, y, z'
|
| 19 |
+
loop_
|
| 20 |
+
_atom_site_type_symbol
|
| 21 |
+
_atom_site_label
|
| 22 |
+
_atom_site_symmetry_multiplicity
|
| 23 |
+
_atom_site_fract_x
|
| 24 |
+
_atom_site_fract_y
|
| 25 |
+
_atom_site_fract_z
|
| 26 |
+
_atom_site_occupancy
|
| 27 |
+
P P0 1 0.50000000 0.50000000 0.00000000 1
|
| 28 |
+
P P1 1 0.00000000 0.00000000 0.00000000 1
|
| 29 |
+
P P2 1 0.50000000 0.00000000 0.50000000 1
|
| 30 |
+
P P3 1 0.00000000 0.50000000 0.50000000 1
|
| 31 |
+
P P4 1 0.02383053 0.77383053 0.25000000 1
|
| 32 |
+
P P5 1 0.47616947 0.72616947 0.75000000 1
|
| 33 |
+
P P6 1 0.77383053 0.75000000 0.52383053 1
|
| 34 |
+
P P7 1 0.72616947 0.25000000 0.97616947 1
|
| 35 |
+
P P8 1 0.75000000 0.02383053 0.27383053 1
|
| 36 |
+
P P9 1 0.25000000 0.47616947 0.22616947 1
|
| 37 |
+
P P10 1 0.97616947 0.22616947 0.75000000 1
|
| 38 |
+
P P11 1 0.52383053 0.27383053 0.25000000 1
|
| 39 |
+
P P12 1 0.22616947 0.25000000 0.47616947 1
|
| 40 |
+
P P13 1 0.27383053 0.75000000 0.02383053 1
|
| 41 |
+
P P14 1 0.25000000 0.97616947 0.72616947 1
|
| 42 |
+
P P15 1 0.75000000 0.52383053 0.77383053 1
|
| 43 |
+
Mg Mg16 1 0.46718783 0.23372553 0.97396779 1
|
| 44 |
+
Mg Mg17 1 0.03281217 0.00677997 0.76653770 1
|
| 45 |
+
Mg Mg18 1 0.74024226 0.26627447 0.73346230 1
|
| 46 |
+
Mg Mg19 1 0.75975774 0.49322003 0.52603221 1
|
| 47 |
+
Mg Mg20 1 0.23372553 0.47396779 0.96718783 1
|
| 48 |
+
Mg Mg21 1 0.00677997 0.26653770 0.53281217 1
|
| 49 |
+
Mg Mg22 1 0.26627447 0.23346230 0.24024226 1
|
| 50 |
+
Mg Mg23 1 0.49322003 0.02603221 0.25975774 1
|
| 51 |
+
Mg Mg24 1 0.47396779 0.46718783 0.73372553 1
|
| 52 |
+
Mg Mg25 1 0.26653770 0.03281217 0.50677997 1
|
| 53 |
+
Mg Mg26 1 0.23346230 0.74024226 0.76627447 1
|
| 54 |
+
Mg Mg27 1 0.02603221 0.75975774 0.99322003 1
|
| 55 |
+
Mg Mg28 1 0.53281217 0.76627447 0.02603221 1
|
| 56 |
+
Mg Mg29 1 0.96718783 0.99322003 0.23346230 1
|
| 57 |
+
Mg Mg30 1 0.25975774 0.73372553 0.26653770 1
|
| 58 |
+
Mg Mg31 1 0.24024226 0.50677997 0.47396779 1
|
| 59 |
+
Mg Mg32 1 0.76627447 0.52603221 0.03281217 1
|
| 60 |
+
Mg Mg33 1 0.99322003 0.73346230 0.46718783 1
|
| 61 |
+
Mg Mg34 1 0.73372553 0.76653770 0.75975774 1
|
| 62 |
+
Mg Mg35 1 0.50677997 0.97396779 0.74024226 1
|
| 63 |
+
Mg Mg36 1 0.52603221 0.53281217 0.26627447 1
|
| 64 |
+
Mg Mg37 1 0.73346230 0.96718783 0.49322003 1
|
| 65 |
+
Mg Mg38 1 0.76653770 0.25975774 0.23372553 1
|
| 66 |
+
Mg Mg39 1 0.97396779 0.24024226 0.00677997 1
|
dft/1501/comp/agm016490948.cif
ADDED
|
@@ -0,0 +1,43 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
# generated using pymatgen
|
| 2 |
+
data_Mg4Ni7Ge6
|
| 3 |
+
_symmetry_space_group_name_H-M 'P 1'
|
| 4 |
+
_cell_length_a 6.81015366
|
| 5 |
+
_cell_length_b 6.81015366
|
| 6 |
+
_cell_length_c 6.81015366
|
| 7 |
+
_cell_angle_alpha 109.47122061
|
| 8 |
+
_cell_angle_beta 109.47122064
|
| 9 |
+
_cell_angle_gamma 109.47122065
|
| 10 |
+
_symmetry_Int_Tables_number 1
|
| 11 |
+
_chemical_formula_structural Mg4Ni7Ge6
|
| 12 |
+
_chemical_formula_sum 'Mg4 Ni7 Ge6'
|
| 13 |
+
_cell_volume 243.13576204
|
| 14 |
+
_cell_formula_units_Z 1
|
| 15 |
+
loop_
|
| 16 |
+
_symmetry_equiv_pos_site_id
|
| 17 |
+
_symmetry_equiv_pos_as_xyz
|
| 18 |
+
1 'x, y, z'
|
| 19 |
+
loop_
|
| 20 |
+
_atom_site_type_symbol
|
| 21 |
+
_atom_site_label
|
| 22 |
+
_atom_site_symmetry_multiplicity
|
| 23 |
+
_atom_site_fract_x
|
| 24 |
+
_atom_site_fract_y
|
| 25 |
+
_atom_site_fract_z
|
| 26 |
+
_atom_site_occupancy
|
| 27 |
+
Mg Mg0 1 0.00000000 0.00000000 0.50000000 1
|
| 28 |
+
Mg Mg1 1 0.50000000 0.50000000 0.50000000 1
|
| 29 |
+
Mg Mg2 1 0.50000000 0.00000000 0.00000000 1
|
| 30 |
+
Mg Mg3 1 -0.00000000 0.50000000 0.00000000 1
|
| 31 |
+
Ni Ni4 1 0.50000000 0.25000000 0.75000000 1
|
| 32 |
+
Ni Ni5 1 0.75000000 0.50000000 0.25000000 1
|
| 33 |
+
Ni Ni6 1 0.75000000 0.25000000 0.50000000 1
|
| 34 |
+
Ni Ni7 1 0.25000000 0.50000000 0.75000000 1
|
| 35 |
+
Ni Ni8 1 0.50000000 0.75000000 0.25000000 1
|
| 36 |
+
Ni Ni9 1 0.25000000 0.75000000 0.50000000 1
|
| 37 |
+
Ni Ni10 1 0.00000000 0.00000000 0.00000000 1
|
| 38 |
+
Ge Ge11 1 -0.00000000 0.68405139 0.68405139 1
|
| 39 |
+
Ge Ge12 1 0.68405139 -0.00000000 0.68405139 1
|
| 40 |
+
Ge Ge13 1 0.31594861 0.31594861 0.00000000 1
|
| 41 |
+
Ge Ge14 1 0.00000000 0.31594861 0.31594861 1
|
| 42 |
+
Ge Ge15 1 0.31594861 0.00000000 0.31594861 1
|
| 43 |
+
Ge Ge16 1 0.68405139 0.68405139 0.00000000 1
|
dft/1501/competitors.json
ADDED
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@@ -0,0 +1,31 @@
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| 1 |
+
{
|
| 2 |
+
"formula": "Mg3Ni3GeP2",
|
| 3 |
+
"nsites": 9,
|
| 4 |
+
"n_entries": 1177,
|
| 5 |
+
"decomposition": [
|
| 6 |
+
{
|
| 7 |
+
"id": "agm003272104",
|
| 8 |
+
"formula": "Mg3P2",
|
| 9 |
+
"frac": 0.2941,
|
| 10 |
+
"nsites": 40
|
| 11 |
+
},
|
| 12 |
+
{
|
| 13 |
+
"id": "agm016490948",
|
| 14 |
+
"formula": "Mg4Ni7Ge6",
|
| 15 |
+
"frac": 0.2222,
|
| 16 |
+
"nsites": 17
|
| 17 |
+
},
|
| 18 |
+
{
|
| 19 |
+
"id": "agm003263418",
|
| 20 |
+
"formula": "NiGe",
|
| 21 |
+
"frac": 0.0654,
|
| 22 |
+
"nsites": 8
|
| 23 |
+
},
|
| 24 |
+
{
|
| 25 |
+
"id": "agm003220761",
|
| 26 |
+
"formula": "MgNi2P",
|
| 27 |
+
"frac": 0.4183,
|
| 28 |
+
"nsites": 16
|
| 29 |
+
}
|
| 30 |
+
]
|
| 31 |
+
}
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dft/1501/result.json
ADDED
|
@@ -0,0 +1,15 @@
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| 1 |
+
{
|
| 2 |
+
"lab_id": 1501,
|
| 3 |
+
"formula": "Mg3Ni3GeP2",
|
| 4 |
+
"name": null,
|
| 5 |
+
"mace_e_hull": null,
|
| 6 |
+
"finished": 1793258949.3239908,
|
| 7 |
+
"vs": {
|
| 8 |
+
"Mg3P2": 0.2941,
|
| 9 |
+
"Mg4Ni7Ge6": 0.2222,
|
| 10 |
+
"NiGe": 0.0654,
|
| 11 |
+
"MgNi2P": 0.4183
|
| 12 |
+
},
|
| 13 |
+
"e_hull_dft": 0.1004,
|
| 14 |
+
"status": "fail"
|
| 15 |
+
}
|
dft/1501/runs/agm003220761/energy.json
ADDED
|
@@ -0,0 +1,8 @@
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|
| 1 |
+
{
|
| 2 |
+
"energy_eV": -39967.31407515313,
|
| 3 |
+
"natoms": 16,
|
| 4 |
+
"e_per_atom": -2497.9571296970707,
|
| 5 |
+
"vol_per_atom": 12.90236158933621,
|
| 6 |
+
"vol_change_pct": 0.14586724622207559,
|
| 7 |
+
"hours": 2.99
|
| 8 |
+
}
|
dft/1501/runs/agm003220761/relax.in
ADDED
|
@@ -0,0 +1,71 @@
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|
| 1 |
+
&CONTROL
|
| 2 |
+
calculation = 'vc-relax'
|
| 3 |
+
nstep = 150
|
| 4 |
+
tstress = .true.
|
| 5 |
+
tprnfor = .true.
|
| 6 |
+
outdir = '/opt/dft/jobs/1501/runs/agm003220761/tmp'
|
| 7 |
+
prefix = 'relax'
|
| 8 |
+
etot_conv_thr = 1e-05
|
| 9 |
+
forc_conv_thr = 0.001
|
| 10 |
+
disk_io = 'low'
|
| 11 |
+
pseudo_dir = '/opt/dft/sssp'
|
| 12 |
+
/
|
| 13 |
+
&SYSTEM
|
| 14 |
+
ecutwfc = 45.0
|
| 15 |
+
ecutrho = 360.0
|
| 16 |
+
occupations = 'smearing'
|
| 17 |
+
degauss = 0.01
|
| 18 |
+
smearing = 'mv'
|
| 19 |
+
nspin = 2
|
| 20 |
+
starting_magnetization(1) = 0.0
|
| 21 |
+
starting_magnetization(2) = 2.0
|
| 22 |
+
starting_magnetization(3) = 0.0
|
| 23 |
+
ntyp = 3
|
| 24 |
+
nat = 16
|
| 25 |
+
ibrav = 0
|
| 26 |
+
/
|
| 27 |
+
&ELECTRONS
|
| 28 |
+
electron_maxstep = 200
|
| 29 |
+
conv_thr = 1e-07
|
| 30 |
+
mixing_beta = 0.3
|
| 31 |
+
/
|
| 32 |
+
&IONS
|
| 33 |
+
/
|
| 34 |
+
&CELL
|
| 35 |
+
press_conv_thr = 0.5
|
| 36 |
+
/
|
| 37 |
+
&FCP
|
| 38 |
+
/
|
| 39 |
+
&RISM
|
| 40 |
+
/
|
| 41 |
+
ATOMIC_SPECIES
|
| 42 |
+
Mg 24.305 Mg.pbe-n-kjpaw_psl.0.3.0.UPF
|
| 43 |
+
Ni 58.6934 ni_pbe_v1.4.uspp.F.UPF
|
| 44 |
+
P 30.973761998 P.pbe-n-rrkjus_psl.1.0.0.UPF
|
| 45 |
+
|
| 46 |
+
K_POINTS automatic
|
| 47 |
+
4 3 3 0 0 0
|
| 48 |
+
|
| 49 |
+
CELL_PARAMETERS angstrom
|
| 50 |
+
5.02512877000000 0.00000000000000 0.00000000000000
|
| 51 |
+
0.00000000000000 6.35631350000000 0.00000000000000
|
| 52 |
+
0.00000000000000 0.00000000000000 6.45362395000000
|
| 53 |
+
|
| 54 |
+
ATOMIC_POSITIONS angstrom
|
| 55 |
+
Mg 4.3916499820 4.7672351250 3.3460722351
|
| 56 |
+
Mg 1.8790855970 1.5890783750 6.3343636899
|
| 57 |
+
Mg 0.6334787880 1.5890783750 3.1075517149
|
| 58 |
+
Mg 3.1460431730 4.7672351250 0.1192602601
|
| 59 |
+
Ni 0.5019415199 3.5152089815 1.1299287480
|
| 60 |
+
Ni 3.0145059049 2.8411045185 2.0968832270
|
| 61 |
+
Ni 4.5231872501 0.3370522315 5.3236952020
|
| 62 |
+
Ni 2.0106228651 6.0192612685 4.3567407230
|
| 63 |
+
Ni 4.5231872501 2.8411045185 5.3236952020
|
| 64 |
+
Ni 2.0106228651 3.5152089815 4.3567407230
|
| 65 |
+
Ni 0.5019415199 6.0192612685 1.1299287480
|
| 66 |
+
Ni 3.0145059049 0.3370522315 2.0968832270
|
| 67 |
+
P 0.6179603361 4.7672351250 5.6412855873
|
| 68 |
+
P 3.1305247211 1.5890783750 4.0391503377
|
| 69 |
+
P 4.4071684339 1.5890783750 0.8123383627
|
| 70 |
+
P 1.8946040489 4.7672351250 2.4144736123
|
| 71 |
+
|
dft/1501/runs/agm003220761/relax.out.gz
ADDED
|
@@ -0,0 +1,3 @@
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| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:bbe4574446f73a4e4f69deb1eb68f101d94fc51f2de11e80dfae5b81ac26193e
|
| 3 |
+
size 72326
|
dft/1501/runs/agm003220761/relaxed.cif
ADDED
|
@@ -0,0 +1,41 @@
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|
| 1 |
+
data_image0
|
| 2 |
+
_chemical_formula_structural Mg4Ni8P4
|
| 3 |
+
_chemical_formula_sum "Mg4 Ni8 P4"
|
| 4 |
+
_cell_length_a 5.038709805
|
| 5 |
+
_cell_length_b 6.368325252
|
| 6 |
+
_cell_length_c 6.433459301
|
| 7 |
+
_cell_angle_alpha 90.0
|
| 8 |
+
_cell_angle_beta 90.0
|
| 9 |
+
_cell_angle_gamma 90.0
|
| 10 |
+
|
| 11 |
+
_space_group_name_H-M_alt "P 1"
|
| 12 |
+
_space_group_IT_number 1
|
| 13 |
+
|
| 14 |
+
loop_
|
| 15 |
+
_space_group_symop_operation_xyz
|
| 16 |
+
'x, y, z'
|
| 17 |
+
|
| 18 |
+
loop_
|
| 19 |
+
_atom_site_type_symbol
|
| 20 |
+
_atom_site_label
|
| 21 |
+
_atom_site_symmetry_multiplicity
|
| 22 |
+
_atom_site_fract_x
|
| 23 |
+
_atom_site_fract_y
|
| 24 |
+
_atom_site_fract_z
|
| 25 |
+
_atom_site_occupancy
|
| 26 |
+
Mg Mg1 1.0 0.8735418196206282 0.7499999999842974 0.5179040108300826 1.0000
|
| 27 |
+
Mg Mg2 1.0 0.3735418196206281 0.25 0.9820959892787235 1.0000
|
| 28 |
+
Mg Mg3 1.0 0.1264581803992183 0.25 0.482095989247636 1.0000
|
| 29 |
+
Mg Mg4 1.0 0.6264581803992183 0.7499999999842974 0.017904010798995184 1.0000
|
| 30 |
+
Ni Ni1 1.0 0.10006317075448247 0.5532603513762868 0.17515888023490583 1.0000
|
| 31 |
+
Ni Ni2 1.0 0.6000631707544826 0.4467396485923078 0.32484111979618163 1.0000
|
| 32 |
+
Ni Ni3 1.0 0.8999368292653639 0.053260351391989494 0.8248411198428128 1.0000
|
| 33 |
+
Ni Ni4 1.0 0.39993682926536395 0.9467396485923079 0.6751588802659934 1.0000
|
| 34 |
+
Ni Ni5 1.0 0.8999368292653639 0.4467396485923078 0.8248411198428128 1.0000
|
| 35 |
+
Ni Ni6 1.0 0.39993682926536395 0.5532603513762868 0.6751588802659934 1.0000
|
| 36 |
+
Ni Ni7 1.0 0.10006317075448247 0.9467396485923079 0.17515888023490583 1.0000
|
| 37 |
+
Ni Ni8 1.0 0.6000631707544826 0.053260351391989494 0.32484111979618163 1.0000
|
| 38 |
+
P P1 1.0 0.12191944866330719 0.7499999999842974 0.8738507983607123 1.0000
|
| 39 |
+
P P2 1.0 0.6219194486831536 0.25 0.626149201748094 1.0000
|
| 40 |
+
P P3 1.0 0.8780805513565392 0.25 0.12614920170146268 1.0000
|
| 41 |
+
P P4 1.0 0.3780805513366928 0.7499999999842974 0.3738507983296248 1.0000
|
dft/1501/runs/agm003220761/scf.in
ADDED
|
@@ -0,0 +1,68 @@
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|
| 1 |
+
&CONTROL
|
| 2 |
+
calculation = 'scf'
|
| 3 |
+
tstress = .true.
|
| 4 |
+
tprnfor = .true.
|
| 5 |
+
outdir = '/opt/dft/jobs/1501/runs/agm003220761/tmp'
|
| 6 |
+
prefix = 'scf'
|
| 7 |
+
disk_io = 'low'
|
| 8 |
+
pseudo_dir = '/opt/dft/sssp'
|
| 9 |
+
/
|
| 10 |
+
&SYSTEM
|
| 11 |
+
ecutwfc = 45.0
|
| 12 |
+
ecutrho = 360.0
|
| 13 |
+
occupations = 'smearing'
|
| 14 |
+
degauss = 0.01
|
| 15 |
+
smearing = 'mv'
|
| 16 |
+
nspin = 2
|
| 17 |
+
starting_magnetization(1) = 0.0
|
| 18 |
+
starting_magnetization(2) = 2.0
|
| 19 |
+
starting_magnetization(3) = 0.0
|
| 20 |
+
ntyp = 3
|
| 21 |
+
nat = 16
|
| 22 |
+
ibrav = 0
|
| 23 |
+
/
|
| 24 |
+
&ELECTRONS
|
| 25 |
+
electron_maxstep = 200
|
| 26 |
+
conv_thr = 1e-08
|
| 27 |
+
mixing_beta = 0.3
|
| 28 |
+
/
|
| 29 |
+
&IONS
|
| 30 |
+
/
|
| 31 |
+
&CELL
|
| 32 |
+
press_conv_thr = 0.5
|
| 33 |
+
/
|
| 34 |
+
&FCP
|
| 35 |
+
/
|
| 36 |
+
&RISM
|
| 37 |
+
/
|
| 38 |
+
ATOMIC_SPECIES
|
| 39 |
+
Mg 24.305 Mg.pbe-n-kjpaw_psl.0.3.0.UPF
|
| 40 |
+
Ni 58.6934 ni_pbe_v1.4.uspp.F.UPF
|
| 41 |
+
P 30.973761998 P.pbe-n-rrkjus_psl.1.0.0.UPF
|
| 42 |
+
|
| 43 |
+
K_POINTS automatic
|
| 44 |
+
5 4 4 0 0 0
|
| 45 |
+
|
| 46 |
+
CELL_PARAMETERS angstrom
|
| 47 |
+
5.03870980500000 0.00000000000000 0.00000000000000
|
| 48 |
+
0.00000000000000 6.36832525200000 0.00000000000000
|
| 49 |
+
0.00000000000000 0.00000000000000 6.43345930100000
|
| 50 |
+
|
| 51 |
+
ATOMIC_POSITIONS angstrom
|
| 52 |
+
Mg 4.4015237316 4.7762439389 3.3319143755
|
| 53 |
+
Mg 1.8821688291 1.5920813130 6.3182745767
|
| 54 |
+
Mg 0.6371860735 1.5920813130 3.1015449260
|
| 55 |
+
Mg 3.1565409760 4.7762439389 0.1151847248
|
| 56 |
+
Ni 0.5041892796 3.5233418666 1.1268775272
|
| 57 |
+
Ni 3.0235441821 2.8449833852 2.0898521235
|
| 58 |
+
Ni 4.5345205255 0.3391792407 5.3065817743
|
| 59 |
+
Ni 2.0151656230 6.0291460112 4.3436071779
|
| 60 |
+
Ni 4.5345205255 2.8449833852 5.3065817743
|
| 61 |
+
Ni 2.0151656230 3.5233418666 4.3436071779
|
| 62 |
+
Ni 0.5041892796 6.0291460112 1.1268775272
|
| 63 |
+
Ni 3.0235441821 0.3391792407 2.0898521235
|
| 64 |
+
P 0.6143167214 4.7762439389 5.6218835464
|
| 65 |
+
P 3.1336716240 1.5920813130 4.0283054058
|
| 66 |
+
P 4.4243930837 1.5920813130 0.8115757550
|
| 67 |
+
P 1.9050381811 4.7762439389 2.4051538957
|
| 68 |
+
|
dft/1501/runs/agm003220761/scf.out.gz
ADDED
|
@@ -0,0 +1,3 @@
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|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:8981b6308c786dfade41c6ab8909f6bcfabbe8cad5d4137de5f96afbd464948b
|
| 3 |
+
size 15841
|
dft/1501/runs/agm003263418/energy.json
ADDED
|
@@ -0,0 +1,8 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"energy_eV": -30312.030503818904,
|
| 3 |
+
"natoms": 8,
|
| 4 |
+
"e_per_atom": -3789.003812977363,
|
| 5 |
+
"vol_per_atom": 13.697200223701438,
|
| 6 |
+
"vol_change_pct": -0.0015383956459391612,
|
| 7 |
+
"hours": 0.59
|
| 8 |
+
}
|
dft/1501/runs/agm003263418/relax.in
ADDED
|
@@ -0,0 +1,61 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
&CONTROL
|
| 2 |
+
calculation = 'vc-relax'
|
| 3 |
+
nstep = 150
|
| 4 |
+
tstress = .true.
|
| 5 |
+
tprnfor = .true.
|
| 6 |
+
outdir = '/opt/dft/jobs/1501/runs/agm003263418/tmp'
|
| 7 |
+
prefix = 'relax'
|
| 8 |
+
etot_conv_thr = 1e-05
|
| 9 |
+
forc_conv_thr = 0.001
|
| 10 |
+
disk_io = 'low'
|
| 11 |
+
pseudo_dir = '/opt/dft/sssp'
|
| 12 |
+
/
|
| 13 |
+
&SYSTEM
|
| 14 |
+
ecutwfc = 45.0
|
| 15 |
+
ecutrho = 360.0
|
| 16 |
+
occupations = 'smearing'
|
| 17 |
+
degauss = 0.01
|
| 18 |
+
smearing = 'mv'
|
| 19 |
+
nspin = 2
|
| 20 |
+
starting_magnetization(1) = 2.0
|
| 21 |
+
starting_magnetization(2) = 0.0
|
| 22 |
+
ntyp = 2
|
| 23 |
+
nat = 8
|
| 24 |
+
ibrav = 0
|
| 25 |
+
/
|
| 26 |
+
&ELECTRONS
|
| 27 |
+
electron_maxstep = 200
|
| 28 |
+
conv_thr = 1e-07
|
| 29 |
+
mixing_beta = 0.3
|
| 30 |
+
/
|
| 31 |
+
&IONS
|
| 32 |
+
/
|
| 33 |
+
&CELL
|
| 34 |
+
press_conv_thr = 0.5
|
| 35 |
+
/
|
| 36 |
+
&FCP
|
| 37 |
+
/
|
| 38 |
+
&RISM
|
| 39 |
+
/
|
| 40 |
+
ATOMIC_SPECIES
|
| 41 |
+
Ni 58.6934 ni_pbe_v1.4.uspp.F.UPF
|
| 42 |
+
Ge 72.63 ge_pbe_v1.4.uspp.F.UPF
|
| 43 |
+
|
| 44 |
+
K_POINTS automatic
|
| 45 |
+
5 3 3 0 0 0
|
| 46 |
+
|
| 47 |
+
CELL_PARAMETERS angstrom
|
| 48 |
+
3.41606205000000 0.00000000000000 0.00000000000000
|
| 49 |
+
0.00000000000000 5.46176131000000 0.00000000000000
|
| 50 |
+
0.00000000000000 0.00000000000000 5.87313529000000
|
| 51 |
+
|
| 52 |
+
ATOMIC_POSITIONS angstrom
|
| 53 |
+
Ni 0.8540155125 2.7579889603 4.0479359850
|
| 54 |
+
Ni 2.5620465375 2.7037723497 1.8251993050
|
| 55 |
+
Ni 0.8540155125 0.0271083053 4.7617669500
|
| 56 |
+
Ni 2.5620465375 5.4346530047 1.1113683400
|
| 57 |
+
Ge 0.8540155125 3.7666989903 0.4939908188
|
| 58 |
+
Ge 2.5620465375 1.6950623197 5.3791444712
|
| 59 |
+
Ge 0.8540155125 1.0358183353 2.4425768262
|
| 60 |
+
Ge 2.5620465375 4.4259429747 3.4305584638
|
| 61 |
+
|
dft/1501/runs/agm003263418/relax.out.gz
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:522436d354e235e95e34229ca662b8e6702bf7bf2388eafa62873b0b6931c368
|
| 3 |
+
size 54512
|
dft/1501/runs/agm003263418/relaxed.cif
ADDED
|
@@ -0,0 +1,33 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
data_image0
|
| 2 |
+
_chemical_formula_structural Ni4Ge4
|
| 3 |
+
_chemical_formula_sum "Ni4 Ge4"
|
| 4 |
+
_cell_length_a 3.383922468
|
| 5 |
+
_cell_length_b 5.543534336
|
| 6 |
+
_cell_length_c 5.841368015
|
| 7 |
+
_cell_angle_alpha 90.0
|
| 8 |
+
_cell_angle_beta 90.0
|
| 9 |
+
_cell_angle_gamma 90.0
|
| 10 |
+
|
| 11 |
+
_space_group_name_H-M_alt "P 1"
|
| 12 |
+
_space_group_IT_number 1
|
| 13 |
+
|
| 14 |
+
loop_
|
| 15 |
+
_space_group_symop_operation_xyz
|
| 16 |
+
'x, y, z'
|
| 17 |
+
|
| 18 |
+
loop_
|
| 19 |
+
_atom_site_type_symbol
|
| 20 |
+
_atom_site_label
|
| 21 |
+
_atom_site_symmetry_multiplicity
|
| 22 |
+
_atom_site_fract_x
|
| 23 |
+
_atom_site_fract_y
|
| 24 |
+
_atom_site_fract_z
|
| 25 |
+
_atom_site_occupancy
|
| 26 |
+
Ni Ni1 1.0 0.25 0.5052468337593066 0.688650677182167 1.0000
|
| 27 |
+
Ni Ni2 1.0 0.7500000000295514 0.4947531662767715 0.31134932290342954 1.0000
|
| 28 |
+
Ni Ni3 1.0 0.25 0.005246833741267549 0.8113493229376681 1.0000
|
| 29 |
+
Ni Ni4 1.0 0.7500000000295514 0.9947531662948106 0.18865067714792838 1.0000
|
| 30 |
+
Ge Ge1 1.0 0.25 0.6911826912692546 0.08304128311285658 1.0000
|
| 31 |
+
Ge Ge2 1.0 0.7500000000295514 0.3088173087487845 0.9169587169556206 1.0000
|
| 32 |
+
Ge Ge3 1.0 0.25 0.19118269126925458 0.41695871692138203 1.0000
|
| 33 |
+
Ge Ge4 1.0 0.7500000000295514 0.8088173087668237 0.5830412831470952 1.0000
|
dft/1501/runs/agm003263418/scf.in
ADDED
|
@@ -0,0 +1,58 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
&CONTROL
|
| 2 |
+
calculation = 'scf'
|
| 3 |
+
tstress = .true.
|
| 4 |
+
tprnfor = .true.
|
| 5 |
+
outdir = '/opt/dft/jobs/1501/runs/agm003263418/tmp'
|
| 6 |
+
prefix = 'scf'
|
| 7 |
+
disk_io = 'low'
|
| 8 |
+
pseudo_dir = '/opt/dft/sssp'
|
| 9 |
+
/
|
| 10 |
+
&SYSTEM
|
| 11 |
+
ecutwfc = 45.0
|
| 12 |
+
ecutrho = 360.0
|
| 13 |
+
occupations = 'smearing'
|
| 14 |
+
degauss = 0.01
|
| 15 |
+
smearing = 'mv'
|
| 16 |
+
nspin = 2
|
| 17 |
+
starting_magnetization(1) = 2.0
|
| 18 |
+
starting_magnetization(2) = 0.0
|
| 19 |
+
ntyp = 2
|
| 20 |
+
nat = 8
|
| 21 |
+
ibrav = 0
|
| 22 |
+
/
|
| 23 |
+
&ELECTRONS
|
| 24 |
+
electron_maxstep = 200
|
| 25 |
+
conv_thr = 1e-08
|
| 26 |
+
mixing_beta = 0.3
|
| 27 |
+
/
|
| 28 |
+
&IONS
|
| 29 |
+
/
|
| 30 |
+
&CELL
|
| 31 |
+
press_conv_thr = 0.5
|
| 32 |
+
/
|
| 33 |
+
&FCP
|
| 34 |
+
/
|
| 35 |
+
&RISM
|
| 36 |
+
/
|
| 37 |
+
ATOMIC_SPECIES
|
| 38 |
+
Ni 58.6934 ni_pbe_v1.4.uspp.F.UPF
|
| 39 |
+
Ge 72.63 ge_pbe_v1.4.uspp.F.UPF
|
| 40 |
+
|
| 41 |
+
K_POINTS automatic
|
| 42 |
+
8 5 5 0 0 0
|
| 43 |
+
|
| 44 |
+
CELL_PARAMETERS angstrom
|
| 45 |
+
3.38392246800000 0.00000000000000 0.00000000000000
|
| 46 |
+
0.00000000000000 5.54353433600000 0.00000000000000
|
| 47 |
+
0.00000000000000 0.00000000000000 5.84136801500000
|
| 48 |
+
|
| 49 |
+
ATOMIC_POSITIONS angstrom
|
| 50 |
+
Ni 0.8459806170 2.8008531711 4.0226620392
|
| 51 |
+
Ni 2.5379418511 2.7426811651 1.8187059763
|
| 52 |
+
Ni 0.8459806170 0.0290860030 4.7393899840
|
| 53 |
+
Ni 2.5379418511 5.5144483332 1.1019780315
|
| 54 |
+
Ge 0.8459806170 3.8315949815 0.4850746951
|
| 55 |
+
Ge 2.5379418511 1.7119393546 5.3562933203
|
| 56 |
+
Ge 0.8459806170 1.0598278135 2.4356093126
|
| 57 |
+
Ge 2.5379418511 4.4837065227 3.4057587028
|
| 58 |
+
|
dft/1501/runs/agm003263418/scf.out.gz
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:fac3c00da9f96e288034476310095885e2950eace918ac761cff2c8e6fe55ef5
|
| 3 |
+
size 25867
|
dft/1501/runs/agm003272104/energy.json
ADDED
|
@@ -0,0 +1,8 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"energy_eV": -14062.346267976274,
|
| 3 |
+
"natoms": 40,
|
| 4 |
+
"e_per_atom": -351.55865669940687,
|
| 5 |
+
"vol_per_atom": 21.904163706481185,
|
| 6 |
+
"vol_change_pct": -0.28756264206600823,
|
| 7 |
+
"hours": 1.5
|
| 8 |
+
}
|
dft/1501/runs/agm003272104/relax.in
ADDED
|
@@ -0,0 +1,90 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
&CONTROL
|
| 2 |
+
calculation = 'vc-relax'
|
| 3 |
+
nstep = 150
|
| 4 |
+
tstress = .true.
|
| 5 |
+
tprnfor = .true.
|
| 6 |
+
outdir = '/opt/dft/jobs/1501/runs/agm003272104/tmp'
|
| 7 |
+
prefix = 'relax'
|
| 8 |
+
etot_conv_thr = 1e-05
|
| 9 |
+
forc_conv_thr = 0.001
|
| 10 |
+
disk_io = 'low'
|
| 11 |
+
pseudo_dir = '/opt/dft/sssp'
|
| 12 |
+
/
|
| 13 |
+
&SYSTEM
|
| 14 |
+
ecutwfc = 30.0
|
| 15 |
+
ecutrho = 240.0
|
| 16 |
+
occupations = 'smearing'
|
| 17 |
+
degauss = 0.01
|
| 18 |
+
smearing = 'mv'
|
| 19 |
+
ntyp = 2
|
| 20 |
+
nat = 40
|
| 21 |
+
ibrav = 0
|
| 22 |
+
/
|
| 23 |
+
&ELECTRONS
|
| 24 |
+
electron_maxstep = 200
|
| 25 |
+
conv_thr = 1e-07
|
| 26 |
+
mixing_beta = 0.3
|
| 27 |
+
/
|
| 28 |
+
&IONS
|
| 29 |
+
/
|
| 30 |
+
&CELL
|
| 31 |
+
press_conv_thr = 0.5
|
| 32 |
+
/
|
| 33 |
+
&FCP
|
| 34 |
+
/
|
| 35 |
+
&RISM
|
| 36 |
+
/
|
| 37 |
+
ATOMIC_SPECIES
|
| 38 |
+
P 30.973761998 P.pbe-n-rrkjus_psl.1.0.0.UPF
|
| 39 |
+
Mg 24.305 Mg.pbe-n-kjpaw_psl.0.3.0.UPF
|
| 40 |
+
|
| 41 |
+
K_POINTS automatic
|
| 42 |
+
2 2 2 0 0 0
|
| 43 |
+
|
| 44 |
+
CELL_PARAMETERS angstrom
|
| 45 |
+
10.45088516000000 0.00000000000000 0.00000000000000
|
| 46 |
+
-3.48362838933381 9.85318902044083 0.00000000000000
|
| 47 |
+
-3.48362838933381 -4.92659450858219 8.53311200093750
|
| 48 |
+
|
| 49 |
+
ATOMIC_POSITIONS angstrom
|
| 50 |
+
P 3.4836283853 4.9265945102 0.0000000000
|
| 51 |
+
P 0.0000000000 0.0000000000 0.0000000000
|
| 52 |
+
P 3.4836283853 -2.4632972543 4.2665560005
|
| 53 |
+
P -3.4836283893 2.4632972559 4.2665560005
|
| 54 |
+
P -3.3175949678 6.3930498547 2.1332780002
|
| 55 |
+
P -0.1660334255 3.4601391673 6.3998340007
|
| 56 |
+
P 3.6496618048 4.8091911528 4.4699045820
|
| 57 |
+
P 3.3175949618 -2.3458938952 8.3297634194
|
| 58 |
+
P 6.8012233510 -1.1142452688 2.3366265818
|
| 59 |
+
P 0.1660334197 3.5775425248 1.9299294187
|
| 60 |
+
P 6.8012233492 -1.4664553429 6.3998340007
|
| 61 |
+
P 3.6496618068 1.4664553445 2.1332780002
|
| 62 |
+
P -0.1660334235 0.1174033591 4.0632074189
|
| 63 |
+
P 0.1660334195 7.2724884071 0.2033485815
|
| 64 |
+
P -3.3175949697 6.0408397807 6.1964854192
|
| 65 |
+
P 3.3175949617 1.3490519871 6.6031825822
|
| 66 |
+
Mg 0.6753716243 -2.4954025398 8.3109762374
|
| 67 |
+
Mg -2.3510351687 -3.7096160975 6.5409520470
|
| 68 |
+
Mg 4.2534754560 -0.9898186552 6.2587159544
|
| 69 |
+
Mg 4.3894448510 2.2682427871 4.4886917640
|
| 70 |
+
Mg -2.5778119583 -0.0948480276 8.2531220793
|
| 71 |
+
Mg -2.7137812123 0.0012968283 4.5465459221
|
| 72 |
+
Mg 1.1325932536 1.1167719722 2.0500141119
|
| 73 |
+
Mg 4.1589999089 -1.0232207697 2.2165418885
|
| 74 |
+
Mg 0.7698470688 0.9885218301 6.2609621254
|
| 75 |
+
Mg 0.9058163959 -2.1733949041 4.3244102438
|
| 76 |
+
Mg -2.8082567631 3.5186233127 6.5387058760
|
| 77 |
+
Mg -5.8346634883 2.5928442764 8.4752577576
|
| 78 |
+
Mg 2.8082567570 7.4219970516 0.2221357636
|
| 79 |
+
Mg 5.8346635500 8.6362106093 1.9921599539
|
| 80 |
+
Mg -0.7698470747 5.9164131671 2.2743960466
|
| 81 |
+
Mg -0.9058164697 2.6583517247 4.0444202369
|
| 82 |
+
Mg 6.0614403396 5.0214425394 0.2799899216
|
| 83 |
+
Mg 6.1974095936 4.9252976835 3.9865660789
|
| 84 |
+
Mg 2.3510351277 3.8098225397 6.4830978890
|
| 85 |
+
Mg -0.6753715276 5.9498152816 6.3165701124
|
| 86 |
+
Mg 2.7137813125 3.9380726817 2.2721498755
|
| 87 |
+
Mg 2.5778119854 7.0999894159 4.2087017571
|
| 88 |
+
Mg 6.2918851445 1.4079711991 1.9944061250
|
| 89 |
+
Mg 9.3182918696 2.3337502355 0.0578542434
|
| 90 |
+
|
dft/1501/runs/agm003272104/relax.out.gz
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:067b48194b210de1315e6de14f58e83f44dd2dfe2b03665c5814f53650d5fe18
|
| 3 |
+
size 17754
|
dft/1501/runs/agm003272104/relaxed.cif
ADDED
|
@@ -0,0 +1,65 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
data_image0
|
| 2 |
+
_chemical_formula_structural P16Mg24
|
| 3 |
+
_chemical_formula_sum "P16 Mg24"
|
| 4 |
+
_cell_length_a 10.440856219
|
| 5 |
+
_cell_length_b 10.440856781813093
|
| 6 |
+
_cell_length_c 10.440856686403812
|
| 7 |
+
_cell_angle_alpha 109.47122277539957
|
| 8 |
+
_cell_angle_beta 109.47122060517566
|
| 9 |
+
_cell_angle_gamma 109.4712200213574
|
| 10 |
+
|
| 11 |
+
_space_group_name_H-M_alt "P 1"
|
| 12 |
+
_space_group_IT_number 1
|
| 13 |
+
|
| 14 |
+
loop_
|
| 15 |
+
_space_group_symop_operation_xyz
|
| 16 |
+
'x, y, z'
|
| 17 |
+
|
| 18 |
+
loop_
|
| 19 |
+
_atom_site_type_symbol
|
| 20 |
+
_atom_site_label
|
| 21 |
+
_atom_site_symmetry_multiplicity
|
| 22 |
+
_atom_site_fract_x
|
| 23 |
+
_atom_site_fract_y
|
| 24 |
+
_atom_site_fract_z
|
| 25 |
+
_atom_site_occupancy
|
| 26 |
+
P P1 1.0 0.49999999997191935 0.49999999996795214 0.9999999999765394 1.0000
|
| 27 |
+
P P2 1.0 0.0 0.0 0.0 1.0000
|
| 28 |
+
P P3 1.0 0.49999999996110794 0.9999999999695237 0.5 1.0000
|
| 29 |
+
P P4 1.0 1.8248069610572178e-11 0.49999999998554745 0.5000000000117303 1.0000
|
| 30 |
+
P P5 1.0 0.023835442663350175 0.7738354137505864 0.250000004774665 1.0000
|
| 31 |
+
P P6 1.0 0.47616454261828123 0.7261645217472549 0.7499999604332337 1.0000
|
| 32 |
+
P P7 1.0 0.7738354705823266 0.7499999852848043 0.5238355175403171 1.0000
|
| 33 |
+
P P8 1.0 0.7261645082824756 0.2499999286820755 0.9761645039378795 1.0000
|
| 34 |
+
P P9 1.0 0.7500000769172663 0.02383543602455288 0.27383543663889093 1.0000
|
| 35 |
+
P P10 1.0 0.250000040610892 0.47616466448291417 0.2261646646171501 1.0000
|
| 36 |
+
P P11 1.0 0.9761645572891589 0.2261645861708654 0.749999995190144 1.0000
|
| 37 |
+
P P12 1.0 0.523835457327129 0.27383547816990333 0.2500000395433057 1.0000
|
| 38 |
+
P P13 1.0 0.22616452936060488 0.25000001463664767 0.4761644824244919 1.0000
|
| 39 |
+
P P14 1.0 0.27383549166632093 0.7500000712452415 0.02383549603865997 1.0000
|
| 40 |
+
P P15 1.0 0.24999992303739518 0.9761645639086292 0.7261645633493787 1.0000
|
| 41 |
+
P P16 1.0 0.7499999593508684 0.5238353354545614 0.7738353353593891 1.0000
|
| 42 |
+
Mg Mg1 1.0 0.46723881057564975 0.23375927705990984 0.9739864661374311 1.0000
|
| 43 |
+
Mg Mg2 1.0 0.032761152645514324 0.006747668692911965 0.76652046440005 1.0000
|
| 44 |
+
Mg Mg3 1.0 0.7402272246600283 0.2662407356173613 0.7334795457825978 1.0000
|
| 45 |
+
Mg Mg4 1.0 0.7597727975399771 0.4932523476336266 0.5260135379439786 1.0000
|
| 46 |
+
Mg Mg5 1.0 0.2337592638859631 0.4739864707528879 0.9672388183531323 1.0000
|
| 47 |
+
Mg Mg6 1.0 0.006747674893284186 0.2665204482967969 0.5327611844666128 1.0000
|
| 48 |
+
Mg Mg7 1.0 0.266240709087553 0.23347955652082183 0.240227206191337 1.0000
|
| 49 |
+
Mg Mg8 1.0 0.49325235145277957 0.026013548376526106 0.2597728082442043 1.0000
|
| 50 |
+
Mg Mg9 1.0 0.4739864690635679 0.46723879932229345 0.7337592606493066 1.0000
|
| 51 |
+
Mg Mg10 1.0 0.2665204321295518 0.0327611816924794 0.506747656900196 1.0000
|
| 52 |
+
Mg Mg11 1.0 0.23347954303496254 0.7402272176628385 0.7662407413260284 1.0000
|
| 53 |
+
Mg Mg12 1.0 0.026013492800269735 0.7597727824236209 0.9932523316698377 1.0000
|
| 54 |
+
Mg Mg13 1.0 0.5327611893731468 0.7662407228674072 0.026013533839108278 1.0000
|
| 55 |
+
Mg Mg14 1.0 0.9672388472940309 0.9932523312183811 0.23347953556475917 1.0000
|
| 56 |
+
Mg Mg15 1.0 0.25977277529463333 0.7337592643158208 0.2665204542056718 1.0000
|
| 57 |
+
Mg Mg16 1.0 0.24022720239956796 0.5067476522776665 0.47398646202083033 1.0000
|
| 58 |
+
Mg Mg17 1.0 0.7662407360594471 0.5260135291642702 0.03276118162340687 1.0000
|
| 59 |
+
Mg Mg18 1.0 0.9932523250579911 0.7334795516262264 0.46723881552165675 1.0000
|
| 60 |
+
Mg Mg19 1.0 0.7337592908646297 0.7665204434166538 0.7597727937852023 1.0000
|
| 61 |
+
Mg Mg20 1.0 0.5067476484960167 0.9739864515507908 0.740227191732335 1.0000
|
| 62 |
+
Mg Mg21 1.0 0.5260135308852286 0.5327612006050235 0.26624073932723274 1.0000
|
| 63 |
+
Mg Mg22 1.0 0.7334795678158584 0.9672388182246787 0.4932523430763433 1.0000
|
| 64 |
+
Mg Mg23 1.0 0.7665204569258905 0.2597727822601849 0.2337592586622412 1.0000
|
| 65 |
+
Mg Mg24 1.0 0.9739865071543922 0.24022721750956127 0.006747668318432022 1.0000
|
dft/1501/runs/agm003272104/scf.in
ADDED
|
@@ -0,0 +1,87 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
&CONTROL
|
| 2 |
+
calculation = 'scf'
|
| 3 |
+
tstress = .true.
|
| 4 |
+
tprnfor = .true.
|
| 5 |
+
outdir = '/opt/dft/jobs/1501/runs/agm003272104/tmp'
|
| 6 |
+
prefix = 'scf'
|
| 7 |
+
disk_io = 'low'
|
| 8 |
+
pseudo_dir = '/opt/dft/sssp'
|
| 9 |
+
/
|
| 10 |
+
&SYSTEM
|
| 11 |
+
ecutwfc = 30.0
|
| 12 |
+
ecutrho = 240.0
|
| 13 |
+
occupations = 'smearing'
|
| 14 |
+
degauss = 0.01
|
| 15 |
+
smearing = 'mv'
|
| 16 |
+
ntyp = 2
|
| 17 |
+
nat = 40
|
| 18 |
+
ibrav = 0
|
| 19 |
+
/
|
| 20 |
+
&ELECTRONS
|
| 21 |
+
electron_maxstep = 200
|
| 22 |
+
conv_thr = 1e-08
|
| 23 |
+
mixing_beta = 0.3
|
| 24 |
+
/
|
| 25 |
+
&IONS
|
| 26 |
+
/
|
| 27 |
+
&CELL
|
| 28 |
+
press_conv_thr = 0.5
|
| 29 |
+
/
|
| 30 |
+
&FCP
|
| 31 |
+
/
|
| 32 |
+
&RISM
|
| 33 |
+
/
|
| 34 |
+
ATOMIC_SPECIES
|
| 35 |
+
P 30.973761998 P.pbe-n-rrkjus_psl.1.0.0.UPF
|
| 36 |
+
Mg 24.305 Mg.pbe-n-kjpaw_psl.0.3.0.UPF
|
| 37 |
+
|
| 38 |
+
K_POINTS automatic
|
| 39 |
+
3 3 3 0 0 0
|
| 40 |
+
|
| 41 |
+
CELL_PARAMETERS angstrom
|
| 42 |
+
10.44085621900000 -0.00000004200000 -0.00000011500000
|
| 43 |
+
-3.48028544900000 9.84373422700000 -0.00000011800000
|
| 44 |
+
-3.48028548300000 -4.92186722600000 8.52492371300000
|
| 45 |
+
|
| 46 |
+
ATOMIC_POSITIONS angstrom
|
| 47 |
+
P 3.4802853849 4.9218670923 -0.0000001167
|
| 48 |
+
P 0.0000000000 0.0000000000 0.0000000000
|
| 49 |
+
P 3.4802853677 -2.4609336343 4.2624617990
|
| 50 |
+
P -3.4802854658 2.4609335003 4.2624617976
|
| 51 |
+
P -3.3143770880 6.3869633174 2.1312308749
|
| 52 |
+
P -0.1659082671 3.4567703124 6.3936923070
|
| 53 |
+
P 3.6461937028 4.8045516273 4.4656576477
|
| 54 |
+
P 3.3143769562 -2.3436192549 8.3217278144
|
| 55 |
+
P 6.7946633513 -1.1131519950 2.3344261182
|
| 56 |
+
P 0.1659079266 3.5740859445 1.9280364275
|
| 57 |
+
P 6.7946623749 -1.4650963590 6.3936926048
|
| 58 |
+
P 3.6461935539 1.4650966459 2.1312311728
|
| 59 |
+
P -0.1659084160 0.1173153311 4.0592658320
|
| 60 |
+
P 0.1659083306 7.2654862133 0.2031956654
|
| 61 |
+
P -3.3143780645 6.0350189534 6.1904973617
|
| 62 |
+
P 3.3143773603 1.3477810140 6.5968870523
|
| 63 |
+
Mg 0.6750732719 -2.4927678894 8.3031602400
|
| 64 |
+
Mg -2.3491393735 -3.7062896959 6.5345284789
|
| 65 |
+
Mg 4.2492940487 -0.9892859266 6.2528570563
|
| 66 |
+
Mg 4.3853422901 2.2664761922 4.4842251374
|
| 67 |
+
Mg -2.5752285712 -0.0948242043 8.2456370559
|
| 68 |
+
Mg -2.7112767509 0.0013766457 4.5417484226
|
| 69 |
+
Mg 1.1311462017 1.1159442777 2.0479185484
|
| 70 |
+
Mg 4.1553587739 -1.0224968353 2.2145433132
|
| 71 |
+
Mg 0.7690084759 0.9879088844 6.2552416111
|
| 72 |
+
Mg 0.9050567335 -2.1716523300 4.3199850823
|
| 73 |
+
Mg -2.8052122042 3.5152647965 6.5321437514
|
| 74 |
+
Mg -5.8294246920 2.5903452436 8.4674002626
|
| 75 |
+
Mg 2.8052120149 7.4146348478 0.2217632398
|
| 76 |
+
Mg 5.8294246603 8.6281566542 1.9903950008
|
| 77 |
+
Mg -0.7690087619 5.9111528850 2.2720664236
|
| 78 |
+
Mg -0.9050570033 2.6553907661 4.0406983423
|
| 79 |
+
Mg 6.0555138580 5.0166911626 0.2792864239
|
| 80 |
+
Mg 6.1915620377 4.9204903126 3.9831750573
|
| 81 |
+
Mg 2.3491390851 3.8059226808 6.4770049314
|
| 82 |
+
Mg -0.6750734871 5.9443637937 6.3103801666
|
| 83 |
+
Mg 2.7112768109 3.9339580740 2.2696818687
|
| 84 |
+
Mg 2.5752285533 7.0935192883 4.2049383975
|
| 85 |
+
Mg 6.2854974911 1.4066021618 1.9927797285
|
| 86 |
+
Mg 9.3097099788 2.3315217148 0.0575232173
|
| 87 |
+
|
dft/1501/runs/agm003272104/scf.out.gz
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:6f1756875c3aa19220f29d2ab617898059112db117100e6c2395a27b121ef4c1
|
| 3 |
+
size 6727
|
dft/1501/runs/agm016490948/energy.json
ADDED
|
@@ -0,0 +1,8 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"energy_eV": -51970.88460490409,
|
| 3 |
+
"natoms": 17,
|
| 4 |
+
"e_per_atom": -3057.110859112005,
|
| 5 |
+
"vol_per_atom": 14.270234827354768,
|
| 6 |
+
"vol_change_pct": -0.22282618156805878,
|
| 7 |
+
"hours": 7.17
|
| 8 |
+
}
|
dft/1501/runs/agm016490948/relax.in
ADDED
|
@@ -0,0 +1,72 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
&CONTROL
|
| 2 |
+
calculation = 'vc-relax'
|
| 3 |
+
nstep = 150
|
| 4 |
+
tstress = .true.
|
| 5 |
+
tprnfor = .true.
|
| 6 |
+
outdir = '/opt/dft/jobs/1501/runs/agm016490948/tmp'
|
| 7 |
+
prefix = 'relax'
|
| 8 |
+
etot_conv_thr = 1e-05
|
| 9 |
+
forc_conv_thr = 0.001
|
| 10 |
+
disk_io = 'low'
|
| 11 |
+
pseudo_dir = '/opt/dft/sssp'
|
| 12 |
+
/
|
| 13 |
+
&SYSTEM
|
| 14 |
+
ecutwfc = 45.0
|
| 15 |
+
ecutrho = 360.0
|
| 16 |
+
occupations = 'smearing'
|
| 17 |
+
degauss = 0.01
|
| 18 |
+
smearing = 'mv'
|
| 19 |
+
nspin = 2
|
| 20 |
+
starting_magnetization(1) = 0.0
|
| 21 |
+
starting_magnetization(2) = 2.0
|
| 22 |
+
starting_magnetization(3) = 0.0
|
| 23 |
+
ntyp = 3
|
| 24 |
+
nat = 17
|
| 25 |
+
ibrav = 0
|
| 26 |
+
/
|
| 27 |
+
&ELECTRONS
|
| 28 |
+
electron_maxstep = 200
|
| 29 |
+
conv_thr = 1e-07
|
| 30 |
+
mixing_beta = 0.3
|
| 31 |
+
/
|
| 32 |
+
&IONS
|
| 33 |
+
/
|
| 34 |
+
&CELL
|
| 35 |
+
press_conv_thr = 0.5
|
| 36 |
+
/
|
| 37 |
+
&FCP
|
| 38 |
+
/
|
| 39 |
+
&RISM
|
| 40 |
+
/
|
| 41 |
+
ATOMIC_SPECIES
|
| 42 |
+
Mg 24.305 Mg.pbe-n-kjpaw_psl.0.3.0.UPF
|
| 43 |
+
Ni 58.6934 ni_pbe_v1.4.uspp.F.UPF
|
| 44 |
+
Ge 72.63 ge_pbe_v1.4.uspp.F.UPF
|
| 45 |
+
|
| 46 |
+
K_POINTS automatic
|
| 47 |
+
3 3 3 0 0 0
|
| 48 |
+
|
| 49 |
+
CELL_PARAMETERS angstrom
|
| 50 |
+
6.81015366000000 0.00000000000000 0.00000000000000
|
| 51 |
+
-2.27005122173800 6.42067444459670 0.00000000000000
|
| 52 |
+
-2.27005122061738 -3.21033722083463 5.56046717975286
|
| 53 |
+
|
| 54 |
+
ATOMIC_POSITIONS angstrom
|
| 55 |
+
Mg -1.1350256103 -1.6051686104 2.7802335899
|
| 56 |
+
Mg 1.1350256088 1.6051686119 2.7802335899
|
| 57 |
+
Mg 3.4050768300 0.0000000000 0.0000000000
|
| 58 |
+
Mg -1.1350256109 3.2103372223 0.0000000000
|
| 59 |
+
Ni 1.1350256091 -0.8025843045 4.1703503848
|
| 60 |
+
Ni 3.4050768290 2.4077529171 1.3901167949
|
| 61 |
+
Ni 3.4050768293 0.0000000007 2.7802335899
|
| 62 |
+
Ni -1.1350256113 0.8025843067 4.1703503848
|
| 63 |
+
Ni 1.1350256085 4.0129215282 1.3901167949
|
| 64 |
+
Ni -1.1350256116 3.2103372230 2.7802335899
|
| 65 |
+
Ni 0.0000000000 0.0000000000 0.0000000000
|
| 66 |
+
Ge -3.1056633864 2.1960356403 3.8036453034
|
| 67 |
+
Ge 3.1056633844 -2.1960356383 3.8036453034
|
| 68 |
+
Ge 1.4344390546 2.0286031660 0.0000000000
|
| 69 |
+
Ge -1.4344390559 1.0143015835 1.7568218764
|
| 70 |
+
Ge 1.4344390550 -1.0143015826 1.7568218764
|
| 71 |
+
Ge 3.1056633836 4.3920712786 0.0000000000
|
| 72 |
+
|
dft/1501/runs/agm016490948/relax.out.gz
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:0696e1b672995ae7e5032645da59dbe953bb3c87ba400dbd6264e5d2baf4788e
|
| 3 |
+
size 34058
|
dft/1501/runs/agm016490948/relaxed.cif
ADDED
|
@@ -0,0 +1,42 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
data_image0
|
| 2 |
+
_chemical_formula_structural Mg4Ni7Ge6
|
| 3 |
+
_chemical_formula_sum "Mg4 Ni7 Ge6"
|
| 4 |
+
_cell_length_a 6.805091340004528
|
| 5 |
+
_cell_length_b 6.805091570249672
|
| 6 |
+
_cell_length_c 6.805091703702483
|
| 7 |
+
_cell_angle_alpha 109.47115480342981
|
| 8 |
+
_cell_angle_beta 109.47115346314948
|
| 9 |
+
_cell_angle_gamma 109.47135215338128
|
| 10 |
+
|
| 11 |
+
_space_group_name_H-M_alt "P 1"
|
| 12 |
+
_space_group_IT_number 1
|
| 13 |
+
|
| 14 |
+
loop_
|
| 15 |
+
_space_group_symop_operation_xyz
|
| 16 |
+
'x, y, z'
|
| 17 |
+
|
| 18 |
+
loop_
|
| 19 |
+
_atom_site_type_symbol
|
| 20 |
+
_atom_site_label
|
| 21 |
+
_atom_site_symmetry_multiplicity
|
| 22 |
+
_atom_site_fract_x
|
| 23 |
+
_atom_site_fract_y
|
| 24 |
+
_atom_site_fract_z
|
| 25 |
+
_atom_site_occupancy
|
| 26 |
+
Mg Mg1 1.0 1.7997436532554426e-11 1.7997427339594684e-11 0.5000000000359949 1.0000
|
| 27 |
+
Mg Mg2 1.0 0.5000000000179974 0.5000000000179974 0.5000000000359949 1.0000
|
| 28 |
+
Mg Mg3 1.0 0.49999999999050054 1.5586267989133964e-11 0.0 1.0000
|
| 29 |
+
Mg Mg4 1.0 2.938974374268699e-11 0.49999999999999994 0.0 1.0000
|
| 30 |
+
Ni Ni1 1.0 0.49999997641661326 0.24999929672662588 0.7499991626320434 1.0000
|
| 31 |
+
Ni Ni2 1.0 0.7500008138414018 0.5000001341449577 0.25000083742194895 1.0000
|
| 32 |
+
Ni Ni3 1.0 0.7499999970976587 0.24999999711020165 0.49999999420481694 1.0000
|
| 33 |
+
Ni Ni4 1.0 0.24999918622017958 0.4999998658976248 0.7499991626320434 1.0000
|
| 34 |
+
Ni Ni5 1.0 0.5000000236198825 0.7500007032847841 0.25000083742194895 1.0000
|
| 35 |
+
Ni Ni6 1.0 0.25000000296772595 0.7500000029257933 0.5000000058671729 1.0000
|
| 36 |
+
Ni Ni7 1.0 0.0 0.0 0.0 1.0000
|
| 37 |
+
Ge Ge1 1.0 1.6426094180560185e-07 0.6844747545289959 0.6844747577051962 1.0000
|
| 38 |
+
Ge Ge2 1.0 0.6844745934493296 3.1678735699906335e-09 0.6844747577051962 1.0000
|
| 39 |
+
Ge Ge3 1.0 0.3155269906664673 0.3155269629523578 0.0 1.0000
|
| 40 |
+
Ge Ge4 1.0 0.9999998358286373 0.3155252454914128 0.31552524236679363 1.0000
|
| 41 |
+
Ge Ge5 1.0 0.3155254065425808 0.9999999968681214 0.31552524236679363 1.0000
|
| 42 |
+
Ge Ge6 1.0 0.6844730093681181 0.6844730370632285 0.0 1.0000
|
dft/1501/runs/agm016490948/scf.in
ADDED
|
@@ -0,0 +1,69 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
&CONTROL
|
| 2 |
+
calculation = 'scf'
|
| 3 |
+
tstress = .true.
|
| 4 |
+
tprnfor = .true.
|
| 5 |
+
outdir = '/opt/dft/jobs/1501/runs/agm016490948/tmp'
|
| 6 |
+
prefix = 'scf'
|
| 7 |
+
disk_io = 'low'
|
| 8 |
+
pseudo_dir = '/opt/dft/sssp'
|
| 9 |
+
/
|
| 10 |
+
&SYSTEM
|
| 11 |
+
ecutwfc = 45.0
|
| 12 |
+
ecutrho = 360.0
|
| 13 |
+
occupations = 'smearing'
|
| 14 |
+
degauss = 0.01
|
| 15 |
+
smearing = 'mv'
|
| 16 |
+
nspin = 2
|
| 17 |
+
starting_magnetization(1) = 0.0
|
| 18 |
+
starting_magnetization(2) = 2.0
|
| 19 |
+
starting_magnetization(3) = 0.0
|
| 20 |
+
ntyp = 3
|
| 21 |
+
nat = 17
|
| 22 |
+
ibrav = 0
|
| 23 |
+
/
|
| 24 |
+
&ELECTRONS
|
| 25 |
+
electron_maxstep = 200
|
| 26 |
+
conv_thr = 1e-08
|
| 27 |
+
mixing_beta = 0.3
|
| 28 |
+
/
|
| 29 |
+
&IONS
|
| 30 |
+
/
|
| 31 |
+
&CELL
|
| 32 |
+
press_conv_thr = 0.5
|
| 33 |
+
/
|
| 34 |
+
&FCP
|
| 35 |
+
/
|
| 36 |
+
&RISM
|
| 37 |
+
/
|
| 38 |
+
ATOMIC_SPECIES
|
| 39 |
+
Mg 24.305 Mg.pbe-n-kjpaw_psl.0.3.0.UPF
|
| 40 |
+
Ni 58.6934 ni_pbe_v1.4.uspp.F.UPF
|
| 41 |
+
Ge 72.63 ge_pbe_v1.4.uspp.F.UPF
|
| 42 |
+
|
| 43 |
+
K_POINTS automatic
|
| 44 |
+
5 5 5 0 0 0
|
| 45 |
+
|
| 46 |
+
CELL_PARAMETERS angstrom
|
| 47 |
+
6.80509134000000 -0.00000785000000 -0.00000000000000
|
| 48 |
+
-2.26837118300000 6.41589927100000 0.00000000000000
|
| 49 |
+
-2.26836008000000 -3.20794570900000 5.55633872000000
|
| 50 |
+
|
| 51 |
+
ATOMIC_POSITIONS angstrom
|
| 52 |
+
Mg -1.1341800400 -1.6039728545 2.7781693602
|
| 53 |
+
Mg 1.1341800385 1.6039728560 2.7781693602
|
| 54 |
+
Mg 3.4025456699 -0.0000039249 0.0000000000
|
| 55 |
+
Mg -1.1341855913 3.2079496355 0.0000000000
|
| 56 |
+
Ni 1.1341861485 -0.8019902149 4.1672493873
|
| 57 |
+
Ni 3.4025462279 2.4059554950 1.3890893330
|
| 58 |
+
Ni 3.4025456692 -0.0000039242 2.7781693278
|
| 59 |
+
Ni -1.1341861507 0.8019902171 4.1672493873
|
| 60 |
+
Ni 1.1341739286 4.0099359268 1.3890893330
|
| 61 |
+
Ni -1.1341855920 3.2079496362 2.7781693926
|
| 62 |
+
Ni 0.0000000000 0.0000000000 0.0000000000
|
| 63 |
+
Ge -3.1052769070 2.1957632167 3.8031735991
|
| 64 |
+
Ge 3.1052769050 -2.1957632147 3.8031735991
|
| 65 |
+
Ge 1.4314577215 2.0243867347 0.0000000000
|
| 66 |
+
Ge -1.4314543556 1.0121903452 1.7531651213
|
| 67 |
+
Ge 1.4314543547 -1.0121903443 1.7531651213
|
| 68 |
+
Ge 3.1052624357 4.3915046864 0.0000000000
|
| 69 |
+
|
dft/1501/runs/agm016490948/scf.out.gz
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:976f215027c839ccd4b6a12095fd8d8529c04319048cc3b9f736ecdfe009e3c7
|
| 3 |
+
size 13608
|
dft/1501/runs/candidate/energy.json
ADDED
|
@@ -0,0 +1,8 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"energy_eV": -18677.51443318804,
|
| 3 |
+
"natoms": 9,
|
| 4 |
+
"e_per_atom": -2075.279381465338,
|
| 5 |
+
"vol_per_atom": 14.114141420383215,
|
| 6 |
+
"vol_change_pct": 1.0913819599011276,
|
| 7 |
+
"hours": 0.38
|
| 8 |
+
}
|
dft/1501/runs/candidate/relax.in
ADDED
|
@@ -0,0 +1,66 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
&CONTROL
|
| 2 |
+
calculation = 'vc-relax'
|
| 3 |
+
nstep = 150
|
| 4 |
+
tstress = .true.
|
| 5 |
+
tprnfor = .true.
|
| 6 |
+
outdir = '/opt/dft/jobs/1501/runs/candidate/tmp'
|
| 7 |
+
prefix = 'relax'
|
| 8 |
+
etot_conv_thr = 1e-05
|
| 9 |
+
forc_conv_thr = 0.001
|
| 10 |
+
disk_io = 'low'
|
| 11 |
+
pseudo_dir = '/opt/dft/sssp'
|
| 12 |
+
/
|
| 13 |
+
&SYSTEM
|
| 14 |
+
ecutwfc = 45.0
|
| 15 |
+
ecutrho = 360.0
|
| 16 |
+
occupations = 'smearing'
|
| 17 |
+
degauss = 0.01
|
| 18 |
+
smearing = 'mv'
|
| 19 |
+
nspin = 2
|
| 20 |
+
starting_magnetization(1) = 0.0
|
| 21 |
+
starting_magnetization(2) = 2.0
|
| 22 |
+
starting_magnetization(3) = 0.0
|
| 23 |
+
starting_magnetization(4) = 0.0
|
| 24 |
+
ntyp = 4
|
| 25 |
+
nat = 9
|
| 26 |
+
ibrav = 0
|
| 27 |
+
/
|
| 28 |
+
&ELECTRONS
|
| 29 |
+
electron_maxstep = 200
|
| 30 |
+
conv_thr = 1e-07
|
| 31 |
+
mixing_beta = 0.3
|
| 32 |
+
/
|
| 33 |
+
&IONS
|
| 34 |
+
/
|
| 35 |
+
&CELL
|
| 36 |
+
press_conv_thr = 0.5
|
| 37 |
+
/
|
| 38 |
+
&FCP
|
| 39 |
+
/
|
| 40 |
+
&RISM
|
| 41 |
+
/
|
| 42 |
+
ATOMIC_SPECIES
|
| 43 |
+
Mg 24.305 Mg.pbe-n-kjpaw_psl.0.3.0.UPF
|
| 44 |
+
Ni 58.6934 ni_pbe_v1.4.uspp.F.UPF
|
| 45 |
+
Ge 72.63 ge_pbe_v1.4.uspp.F.UPF
|
| 46 |
+
P 30.973761998 P.pbe-n-rrkjus_psl.1.0.0.UPF
|
| 47 |
+
|
| 48 |
+
K_POINTS automatic
|
| 49 |
+
3 3 5 0 0 0
|
| 50 |
+
|
| 51 |
+
CELL_PARAMETERS angstrom
|
| 52 |
+
6.13814141000000 0.00000000000000 0.00000000000000
|
| 53 |
+
-3.06907070500000 5.31578639308123 0.00000000000000
|
| 54 |
+
0.00000000000000 0.00000000000000 3.85104355000000
|
| 55 |
+
|
| 56 |
+
ATOMIC_POSITIONS angstrom
|
| 57 |
+
Mg 1.7288877843 2.9945214830 0.0000000000
|
| 58 |
+
Mg 4.7979584893 2.3212649100 0.0000000000
|
| 59 |
+
Mg 2.6803658413 0.0000000000 0.0000000000
|
| 60 |
+
Ni 0.7677975820 1.3298644219 1.9255217750
|
| 61 |
+
Ni -2.3012731230 3.9859219711 1.9255217750
|
| 62 |
+
Ni 4.6025462460 0.0000000000 1.9255217750
|
| 63 |
+
Ge 0.0000000000 0.0000000000 0.0000000000
|
| 64 |
+
P 3.0690707357 1.7719287800 1.9255217750
|
| 65 |
+
P -0.0000000307 3.5438576131 1.9255217750
|
| 66 |
+
|
dft/1501/runs/candidate/relax.out.gz
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:fdb4df389c3adfda478f1b79755ded04cd7ddd0c044964f762141f45570ec3fd
|
| 3 |
+
size 27046
|
dft/1501/runs/candidate/relaxed.cif
ADDED
|
@@ -0,0 +1,34 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
data_image0
|
| 2 |
+
_chemical_formula_structural Mg3Ni3GeP2
|
| 3 |
+
_chemical_formula_sum "Mg3 Ni3 Ge1 P2"
|
| 4 |
+
_cell_length_a 6.150102097
|
| 5 |
+
_cell_length_b 6.150102097362629
|
| 6 |
+
_cell_length_c 3.877944964
|
| 7 |
+
_cell_angle_alpha 90.0
|
| 8 |
+
_cell_angle_beta 90.0
|
| 9 |
+
_cell_angle_gamma 120.00000000342824
|
| 10 |
+
|
| 11 |
+
_space_group_name_H-M_alt "P 1"
|
| 12 |
+
_space_group_IT_number 1
|
| 13 |
+
|
| 14 |
+
loop_
|
| 15 |
+
_space_group_symop_operation_xyz
|
| 16 |
+
'x, y, z'
|
| 17 |
+
|
| 18 |
+
loop_
|
| 19 |
+
_atom_site_type_symbol
|
| 20 |
+
_atom_site_label
|
| 21 |
+
_atom_site_symmetry_multiplicity
|
| 22 |
+
_atom_site_fract_x
|
| 23 |
+
_atom_site_fract_y
|
| 24 |
+
_atom_site_fract_z
|
| 25 |
+
_atom_site_occupancy
|
| 26 |
+
Mg Mg1 1.0 0.563651892208131 0.5636518921566834 0.0 1.0000
|
| 27 |
+
Mg Mg2 1.0 3.1709967984738796e-11 0.43634810782454125 0.0 1.0000
|
| 28 |
+
Mg Mg3 1.0 0.4363481078320706 0.0 0.0 1.0000
|
| 29 |
+
Ni Ni1 1.0 0.24797587305947974 0.24797587303680316 0.49999999994842625 1.0000
|
| 30 |
+
Ni Ni2 1.0 5.426781349680228e-11 0.7520241269444216 0.49999999994842625 1.0000
|
| 31 |
+
Ni Ni3 1.0 0.752024126974424 0.0 0.49999999994842625 1.0000
|
| 32 |
+
Ge Ge1 1.0 0.0 0.0 0.0 1.0000
|
| 33 |
+
P P1 1.0 0.6666666700339402 0.33333332999758714 0.49999999994842625 1.0000
|
| 34 |
+
P P2 1.0 0.3333333300473591 0.6666666700024129 0.49999999994842625 1.0000
|
dft/1501/runs/candidate/scf.in
ADDED
|
@@ -0,0 +1,63 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
&CONTROL
|
| 2 |
+
calculation = 'scf'
|
| 3 |
+
tstress = .true.
|
| 4 |
+
tprnfor = .true.
|
| 5 |
+
outdir = '/opt/dft/jobs/1501/runs/candidate/tmp'
|
| 6 |
+
prefix = 'scf'
|
| 7 |
+
disk_io = 'low'
|
| 8 |
+
pseudo_dir = '/opt/dft/sssp'
|
| 9 |
+
/
|
| 10 |
+
&SYSTEM
|
| 11 |
+
ecutwfc = 45.0
|
| 12 |
+
ecutrho = 360.0
|
| 13 |
+
occupations = 'smearing'
|
| 14 |
+
degauss = 0.01
|
| 15 |
+
smearing = 'mv'
|
| 16 |
+
nspin = 2
|
| 17 |
+
starting_magnetization(1) = 0.0
|
| 18 |
+
starting_magnetization(2) = 2.0
|
| 19 |
+
starting_magnetization(3) = 0.0
|
| 20 |
+
starting_magnetization(4) = 0.0
|
| 21 |
+
ntyp = 4
|
| 22 |
+
nat = 9
|
| 23 |
+
ibrav = 0
|
| 24 |
+
/
|
| 25 |
+
&ELECTRONS
|
| 26 |
+
electron_maxstep = 200
|
| 27 |
+
conv_thr = 1e-08
|
| 28 |
+
mixing_beta = 0.3
|
| 29 |
+
/
|
| 30 |
+
&IONS
|
| 31 |
+
/
|
| 32 |
+
&CELL
|
| 33 |
+
press_conv_thr = 0.5
|
| 34 |
+
/
|
| 35 |
+
&FCP
|
| 36 |
+
/
|
| 37 |
+
&RISM
|
| 38 |
+
/
|
| 39 |
+
ATOMIC_SPECIES
|
| 40 |
+
Mg 24.305 Mg.pbe-n-kjpaw_psl.0.3.0.UPF
|
| 41 |
+
Ni 58.6934 ni_pbe_v1.4.uspp.F.UPF
|
| 42 |
+
Ge 72.63 ge_pbe_v1.4.uspp.F.UPF
|
| 43 |
+
P 30.973761998 P.pbe-n-rrkjus_psl.1.0.0.UPF
|
| 44 |
+
|
| 45 |
+
K_POINTS automatic
|
| 46 |
+
5 5 7 0 0 0
|
| 47 |
+
|
| 48 |
+
CELL_PARAMETERS angstrom
|
| 49 |
+
6.15010209700000 0.00000000000000 -0.00000000000000
|
| 50 |
+
-3.07505104900000 5.32614465200000 -0.00000000000000
|
| 51 |
+
-0.00000000000000 0.00000000000000 3.87794496400000
|
| 52 |
+
|
| 53 |
+
ATOMIC_POSITIONS angstrom
|
| 54 |
+
Mg 1.7332583420 3.0020915110 0.0000000000
|
| 55 |
+
Mg 4.8083093905 2.3240531409 0.0000000000
|
| 56 |
+
Mg 2.6835854130 0.0000000000 0.0000000000
|
| 57 |
+
Ni 0.7625384684 1.3207553700 1.9389724818
|
| 58 |
+
Ni -2.3125125801 4.0053892819 1.9389724818
|
| 59 |
+
Ni 4.6250251603 0.0000000000 1.9389724818
|
| 60 |
+
Ge 0.0000000000 0.0000000000 0.0000000000
|
| 61 |
+
P 3.0750510793 1.7753815329 1.9389724818
|
| 62 |
+
P -0.0000000308 3.5507631191 1.9389724818
|
| 63 |
+
|
dft/1501/runs/candidate/scf.out.gz
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:a4a5c085e2b4b747b5bcadbac0777bc274f14120eb6970be0d74ceaf48a8efa6
|
| 3 |
+
size 10223
|
dft/1856/beta_check.json
ADDED
|
@@ -0,0 +1,14 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"beta_minus_alpha_meV_atom": 7.6,
|
| 3 |
+
"e_hull_vs_alpha": -0.024,
|
| 4 |
+
"e_hull_vs_lowest_Ca2CdP2": -0.024,
|
| 5 |
+
"beta": {
|
| 6 |
+
"energy_eV": -20444.396790078288,
|
| 7 |
+
"natoms": 25,
|
| 8 |
+
"e_per_atom": -817.7758716031316,
|
| 9 |
+
"vol_per_atom": 23.577043566758658,
|
| 10 |
+
"vol_change_pct": 1.8458678591912303,
|
| 11 |
+
"hours": 12.91
|
| 12 |
+
},
|
| 13 |
+
"status": "pass"
|
| 14 |
+
}
|
dft/1856/candidate.cif
ADDED
|
@@ -0,0 +1,46 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
# generated using pymatgen
|
| 2 |
+
data_SrCaCdP2
|
| 3 |
+
_symmetry_space_group_name_H-M 'P 1'
|
| 4 |
+
_cell_length_a 4.28137269
|
| 5 |
+
_cell_length_b 16.70096046
|
| 6 |
+
_cell_length_c 7.01743691
|
| 7 |
+
_cell_angle_alpha 90.00000000
|
| 8 |
+
_cell_angle_beta 90.00000000
|
| 9 |
+
_cell_angle_gamma 90.00000000
|
| 10 |
+
_symmetry_Int_Tables_number 1
|
| 11 |
+
_chemical_formula_structural SrCaCdP2
|
| 12 |
+
_chemical_formula_sum 'Sr4 Ca4 Cd4 P8'
|
| 13 |
+
_cell_volume 501.76804447
|
| 14 |
+
_cell_formula_units_Z 4
|
| 15 |
+
loop_
|
| 16 |
+
_symmetry_equiv_pos_site_id
|
| 17 |
+
_symmetry_equiv_pos_as_xyz
|
| 18 |
+
1 'x, y, z'
|
| 19 |
+
loop_
|
| 20 |
+
_atom_site_type_symbol
|
| 21 |
+
_atom_site_label
|
| 22 |
+
_atom_site_symmetry_multiplicity
|
| 23 |
+
_atom_site_fract_x
|
| 24 |
+
_atom_site_fract_y
|
| 25 |
+
_atom_site_fract_z
|
| 26 |
+
_atom_site_occupancy
|
| 27 |
+
Sr Sr0 1 -0.00000000 0.69981694 0.41061495 1
|
| 28 |
+
Sr Sr1 1 0.50000000 0.80018306 0.91061495 1
|
| 29 |
+
Sr Sr2 1 -0.00000000 0.30018306 0.91061495 1
|
| 30 |
+
Sr Sr3 1 0.50000000 0.19981694 0.41061495 1
|
| 31 |
+
Ca Ca4 1 -0.00000000 0.53125880 0.73932809 1
|
| 32 |
+
Ca Ca5 1 0.50000000 0.96874120 0.23932809 1
|
| 33 |
+
Ca Ca6 1 0.00000000 0.46874120 0.23932809 1
|
| 34 |
+
Ca Ca7 1 0.50000000 0.03125880 0.73932809 1
|
| 35 |
+
Cd Cd8 1 -0.00000000 0.90426234 0.57224157 1
|
| 36 |
+
Cd Cd9 1 0.50000000 0.59573766 0.07224157 1
|
| 37 |
+
Cd Cd10 1 -0.00000000 0.09573766 0.07224157 1
|
| 38 |
+
Cd Cd11 1 0.50000000 0.40426234 0.57224157 1
|
| 39 |
+
P P12 1 -0.00000000 0.94046561 0.94961523 1
|
| 40 |
+
P P13 1 0.50000000 0.55953439 0.44961523 1
|
| 41 |
+
P P14 1 0.00000000 0.05953439 0.44961523 1
|
| 42 |
+
P P15 1 0.50000000 0.44046561 0.94961523 1
|
| 43 |
+
P P16 1 -0.00000000 0.67394320 0.96810016 1
|
| 44 |
+
P P17 1 0.50000000 0.82605680 0.46810016 1
|
| 45 |
+
P P18 1 -0.00000000 0.32605680 0.46810016 1
|
| 46 |
+
P P19 1 0.50000000 0.17394320 0.96810016 1
|
dft/1856/comp/agm002177972.cif
ADDED
|
@@ -0,0 +1,36 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
# generated using pymatgen
|
| 2 |
+
data_Sr2CdP2
|
| 3 |
+
_symmetry_space_group_name_H-M 'P 1'
|
| 4 |
+
_cell_length_a 4.35497634
|
| 5 |
+
_cell_length_b 7.57327002
|
| 6 |
+
_cell_length_c 8.58915525
|
| 7 |
+
_cell_angle_alpha 89.99999738
|
| 8 |
+
_cell_angle_beta 104.68566427
|
| 9 |
+
_cell_angle_gamma 90.00000028
|
| 10 |
+
_symmetry_Int_Tables_number 1
|
| 11 |
+
_chemical_formula_structural Sr2CdP2
|
| 12 |
+
_chemical_formula_sum 'Sr4 Cd2 P4'
|
| 13 |
+
_cell_volume 274.02797182
|
| 14 |
+
_cell_formula_units_Z 2
|
| 15 |
+
loop_
|
| 16 |
+
_symmetry_equiv_pos_site_id
|
| 17 |
+
_symmetry_equiv_pos_as_xyz
|
| 18 |
+
1 'x, y, z'
|
| 19 |
+
loop_
|
| 20 |
+
_atom_site_type_symbol
|
| 21 |
+
_atom_site_label
|
| 22 |
+
_atom_site_symmetry_multiplicity
|
| 23 |
+
_atom_site_fract_x
|
| 24 |
+
_atom_site_fract_y
|
| 25 |
+
_atom_site_fract_z
|
| 26 |
+
_atom_site_occupancy
|
| 27 |
+
Sr Sr0 1 0.53765928 0.73582816 0.07532544 1
|
| 28 |
+
Sr Sr1 1 0.70309473 0.38902425 0.40624517 1
|
| 29 |
+
Sr Sr2 1 0.29690349 0.88902439 0.59375472 1
|
| 30 |
+
Sr Sr3 1 0.46233896 0.23582826 0.92467447 1
|
| 31 |
+
P P4 1 0.06120356 0.43790851 0.12243061 1
|
| 32 |
+
P P5 1 0.67570433 0.99085964 0.35133415 1
|
| 33 |
+
P P6 1 0.32429389 0.49085968 0.64866564 1
|
| 34 |
+
P P7 1 0.93879460 0.93790853 0.87756926 1
|
| 35 |
+
Cd Cd8 1 0.09649892 0.08073773 0.19286764 1
|
| 36 |
+
Cd Cd9 1 0.90349924 0.58073784 0.80713191 1
|
dft/1856/comp/agm003206316.cif
ADDED
|
@@ -0,0 +1,36 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
# generated using pymatgen
|
| 2 |
+
data_Ca2CdP2
|
| 3 |
+
_symmetry_space_group_name_H-M 'P 1'
|
| 4 |
+
_cell_length_a 8.29963282
|
| 5 |
+
_cell_length_b 8.29963282
|
| 6 |
+
_cell_length_c 7.10849330
|
| 7 |
+
_cell_angle_alpha 90.00000000
|
| 8 |
+
_cell_angle_beta 90.00000000
|
| 9 |
+
_cell_angle_gamma 150.66600259
|
| 10 |
+
_symmetry_Int_Tables_number 1
|
| 11 |
+
_chemical_formula_structural Ca2CdP2
|
| 12 |
+
_chemical_formula_sum 'Ca4 Cd2 P4'
|
| 13 |
+
_cell_volume 239.88472774
|
| 14 |
+
_cell_formula_units_Z 2
|
| 15 |
+
loop_
|
| 16 |
+
_symmetry_equiv_pos_site_id
|
| 17 |
+
_symmetry_equiv_pos_as_xyz
|
| 18 |
+
1 'x, y, z'
|
| 19 |
+
loop_
|
| 20 |
+
_atom_site_type_symbol
|
| 21 |
+
_atom_site_label
|
| 22 |
+
_atom_site_symmetry_multiplicity
|
| 23 |
+
_atom_site_fract_x
|
| 24 |
+
_atom_site_fract_y
|
| 25 |
+
_atom_site_fract_z
|
| 26 |
+
_atom_site_occupancy
|
| 27 |
+
Ca Ca0 1 0.29897839 0.70102161 0.92198415 1
|
| 28 |
+
Ca Ca1 1 0.70102161 0.29897839 0.42198415 1
|
| 29 |
+
Ca Ca2 1 0.46348909 0.53651091 0.27062527 1
|
| 30 |
+
Ca Ca3 1 0.53651091 0.46348909 0.77062527 1
|
| 31 |
+
Cd Cd4 1 0.09871264 0.90128736 0.10986373 1
|
| 32 |
+
Cd Cd5 1 0.90128736 0.09871264 0.60986373 1
|
| 33 |
+
P P6 1 0.06279797 0.93720203 0.47931586 1
|
| 34 |
+
P P7 1 0.93720203 0.06279797 0.97931586 1
|
| 35 |
+
P P8 1 0.31895524 0.68104476 0.50688000 1
|
| 36 |
+
P P9 1 0.68104476 0.31895524 0.00688000 1
|
dft/1856/competitors.json
ADDED
|
@@ -0,0 +1,19 @@
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|
| 1 |
+
{
|
| 2 |
+
"formula": "SrCaCdP2",
|
| 3 |
+
"nsites": 20,
|
| 4 |
+
"n_entries": 2358,
|
| 5 |
+
"decomposition": [
|
| 6 |
+
{
|
| 7 |
+
"id": "agm003206316",
|
| 8 |
+
"formula": "Ca2CdP2",
|
| 9 |
+
"frac": 0.5,
|
| 10 |
+
"nsites": 10
|
| 11 |
+
},
|
| 12 |
+
{
|
| 13 |
+
"id": "agm002177972",
|
| 14 |
+
"formula": "Sr2CdP2",
|
| 15 |
+
"frac": 0.5,
|
| 16 |
+
"nsites": 10
|
| 17 |
+
}
|
| 18 |
+
]
|
| 19 |
+
}
|
dft/1856/input_tmp.in
ADDED
|
File without changes
|
dft/1856/job.json
ADDED
|
@@ -0,0 +1 @@
|
|
|
|
|
|
|
| 1 |
+
{"name": "Cadmophosphide", "formula": "SrCaCdP2"}
|
dft/1856/phonon/d000/forces.npy
ADDED
|
@@ -0,0 +1,3 @@
|
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|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:a114c49da2493fe3d5bb621f02315ffd163627d3ee99a5b6eb51a633c04d6f49
|
| 3 |
+
size 1088
|
dft/1856/phonon/d000/scf.in
ADDED
|
@@ -0,0 +1,88 @@
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|
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|
|
|
|
|
|
|
| 1 |
+
&CONTROL
|
| 2 |
+
calculation = 'scf'
|
| 3 |
+
tstress = .false.
|
| 4 |
+
tprnfor = .true.
|
| 5 |
+
outdir = '/opt/dft/jobs/1856/phonon/d000/tmp'
|
| 6 |
+
prefix = 'scf'
|
| 7 |
+
disk_io = 'low'
|
| 8 |
+
pseudo_dir = '/opt/dft/sssp'
|
| 9 |
+
/
|
| 10 |
+
&SYSTEM
|
| 11 |
+
ecutwfc = 60.0
|
| 12 |
+
ecutrho = 480.0
|
| 13 |
+
occupations = 'smearing'
|
| 14 |
+
degauss = 0.01
|
| 15 |
+
smearing = 'mv'
|
| 16 |
+
ntyp = 4
|
| 17 |
+
nat = 40
|
| 18 |
+
ibrav = 0
|
| 19 |
+
/
|
| 20 |
+
&ELECTRONS
|
| 21 |
+
electron_maxstep = 200
|
| 22 |
+
conv_thr = 1e-10
|
| 23 |
+
mixing_beta = 0.3
|
| 24 |
+
/
|
| 25 |
+
&IONS
|
| 26 |
+
/
|
| 27 |
+
&CELL
|
| 28 |
+
/
|
| 29 |
+
&FCP
|
| 30 |
+
/
|
| 31 |
+
&RISM
|
| 32 |
+
/
|
| 33 |
+
ATOMIC_SPECIES
|
| 34 |
+
Sr 87.62 Sr_pbe_v1.uspp.F.UPF
|
| 35 |
+
Ca 40.078 Ca_pbe_v1.uspp.F.UPF
|
| 36 |
+
Cd 112.414 Cd.pbe-dn-rrkjus_psl.0.3.1.UPF
|
| 37 |
+
P 30.973761998 P.pbe-n-rrkjus_psl.1.0.0.UPF
|
| 38 |
+
|
| 39 |
+
K_POINTS automatic
|
| 40 |
+
3 2 4 0 0 0
|
| 41 |
+
|
| 42 |
+
CELL_PARAMETERS angstrom
|
| 43 |
+
8.56849239209021 0.00000000000000 0.00000000000000
|
| 44 |
+
0.00000000000000 16.78923252044744 0.00000000000000
|
| 45 |
+
0.00000000000000 0.00000000000000 7.03293287050372
|
| 46 |
+
|
| 47 |
+
ATOMIC_POSITIONS angstrom
|
| 48 |
+
Sr 0.0000000000 11.7451702775 2.8955379597
|
| 49 |
+
Sr 4.2842461960 11.7451702775 2.8955379597
|
| 50 |
+
Sr 2.1421230895 13.4386784550 6.4120029275
|
| 51 |
+
Sr 6.4263692855 13.4386784550 6.4120029275
|
| 52 |
+
Ca 0.0000000000 8.9137996499 5.2021270584
|
| 53 |
+
Ca 4.2842461960 8.9137996499 5.2021270584
|
| 54 |
+
Ca 2.1421230895 16.2700489666 1.6856609722
|
| 55 |
+
Ca 6.4263692855 16.2700489666 1.6856609722
|
| 56 |
+
Cd 0.0000000000 15.1570378874 4.0393233326
|
| 57 |
+
Cd 4.2842461960 15.1570378874 4.0393233326
|
| 58 |
+
Cd 2.1421230895 10.0268118732 0.5228586122
|
| 59 |
+
Cd 6.4263692855 10.0268118732 0.5228586122
|
| 60 |
+
P 0.0000000000 15.8034462033 6.6716035617
|
| 61 |
+
P 4.2842461960 15.8034462033 6.6716035617
|
| 62 |
+
P 2.1421230895 9.3804017699 3.1551380573
|
| 63 |
+
P 6.4263692855 9.3804017699 3.1551380573
|
| 64 |
+
P 0.0000000000 11.3023985522 6.7905739191
|
| 65 |
+
P 4.2842461960 11.3023985522 6.7905739191
|
| 66 |
+
P 2.1421230895 13.8814503363 3.2741085971
|
| 67 |
+
P 6.4263692855 13.8814503363 3.2741085971
|
| 68 |
+
Sr 2.1421230895 3.3505546834 2.8955373607
|
| 69 |
+
Sr 6.4263692855 3.3505546834 2.8955373607
|
| 70 |
+
Sr 0.0000000000 5.0440613265 6.4120037382
|
| 71 |
+
Sr 4.2842461960 5.0440613265 6.4120037382
|
| 72 |
+
Ca 2.1421230895 0.5191847248 5.2021263758
|
| 73 |
+
Ca 6.4263692855 0.5191847248 5.2021263758
|
| 74 |
+
Ca 0.0000000000 7.8754314085 1.6856611008
|
| 75 |
+
Ca 4.2842461960 7.8754314085 1.6856611008
|
| 76 |
+
Cd 2.1421230895 6.7624208822 4.0393238803
|
| 77 |
+
Cd 6.4263692855 6.7624208822 4.0393238803
|
| 78 |
+
Cd 0.0000000000 1.6321938599 0.5228573815
|
| 79 |
+
Cd 4.2842461960 1.6321938599 0.5228573815
|
| 80 |
+
P 2.1421230895 7.4088304331 6.6716041492
|
| 81 |
+
P 6.4263692855 7.4088304331 6.6716041492
|
| 82 |
+
P 0.0000000000 0.9857863428 3.1551384350
|
| 83 |
+
P 4.2842461960 0.9857863428 3.1551384350
|
| 84 |
+
P 2.1421230895 2.9077816904 6.7905746851
|
| 85 |
+
P 6.4263692855 2.9077816904 6.7905746851
|
| 86 |
+
P 0.0000000000 5.4868340872 3.2741085687
|
| 87 |
+
P 4.2842461960 5.4868340872 3.2741085687
|
| 88 |
+
|