zer0contextlost commited on
Commit
c1d36db
·
verified ·
1 Parent(s): a596575

data: 5402 structures, 8 DFT jobs

Browse files
This view is limited to 50 files because it contains too many changes.   See raw diff
Files changed (50) hide show
  1. ATTRIBUTION.md +19 -0
  2. LICENSE +396 -0
  3. METHODS.md +52 -0
  4. build.log +8 -0
  5. dft/1501/candidate.cif +35 -0
  6. dft/1501/comp/agm003220761.cif +42 -0
  7. dft/1501/comp/agm003263418.cif +34 -0
  8. dft/1501/comp/agm003272104.cif +66 -0
  9. dft/1501/comp/agm016490948.cif +43 -0
  10. dft/1501/competitors.json +31 -0
  11. dft/1501/result.json +15 -0
  12. dft/1501/runs/agm003220761/energy.json +8 -0
  13. dft/1501/runs/agm003220761/relax.in +71 -0
  14. dft/1501/runs/agm003220761/relax.out.gz +3 -0
  15. dft/1501/runs/agm003220761/relaxed.cif +41 -0
  16. dft/1501/runs/agm003220761/scf.in +68 -0
  17. dft/1501/runs/agm003220761/scf.out.gz +3 -0
  18. dft/1501/runs/agm003263418/energy.json +8 -0
  19. dft/1501/runs/agm003263418/relax.in +61 -0
  20. dft/1501/runs/agm003263418/relax.out.gz +3 -0
  21. dft/1501/runs/agm003263418/relaxed.cif +33 -0
  22. dft/1501/runs/agm003263418/scf.in +58 -0
  23. dft/1501/runs/agm003263418/scf.out.gz +3 -0
  24. dft/1501/runs/agm003272104/energy.json +8 -0
  25. dft/1501/runs/agm003272104/relax.in +90 -0
  26. dft/1501/runs/agm003272104/relax.out.gz +3 -0
  27. dft/1501/runs/agm003272104/relaxed.cif +65 -0
  28. dft/1501/runs/agm003272104/scf.in +87 -0
  29. dft/1501/runs/agm003272104/scf.out.gz +3 -0
  30. dft/1501/runs/agm016490948/energy.json +8 -0
  31. dft/1501/runs/agm016490948/relax.in +72 -0
  32. dft/1501/runs/agm016490948/relax.out.gz +3 -0
  33. dft/1501/runs/agm016490948/relaxed.cif +42 -0
  34. dft/1501/runs/agm016490948/scf.in +69 -0
  35. dft/1501/runs/agm016490948/scf.out.gz +3 -0
  36. dft/1501/runs/candidate/energy.json +8 -0
  37. dft/1501/runs/candidate/relax.in +66 -0
  38. dft/1501/runs/candidate/relax.out.gz +3 -0
  39. dft/1501/runs/candidate/relaxed.cif +34 -0
  40. dft/1501/runs/candidate/scf.in +63 -0
  41. dft/1501/runs/candidate/scf.out.gz +3 -0
  42. dft/1856/beta_check.json +14 -0
  43. dft/1856/candidate.cif +46 -0
  44. dft/1856/comp/agm002177972.cif +36 -0
  45. dft/1856/comp/agm003206316.cif +36 -0
  46. dft/1856/competitors.json +19 -0
  47. dft/1856/input_tmp.in +0 -0
  48. dft/1856/job.json +1 -0
  49. dft/1856/phonon/d000/forces.npy +3 -0
  50. dft/1856/phonon/d000/scf.in +88 -0
ATTRIBUTION.md ADDED
@@ -0,0 +1,19 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ # Attribution
2
+
3
+ - **Alexandria** materials database: J. Schmidt et al., "Machine-learning-assisted determination of the global
4
+ zero-temperature phase diagram of materials", Adv. Mater. 35, 2210788 (2023), and related releases.
5
+ https://alexandria.icams.rub.de (CC BY 4.0). Competitor structures in `dft/*/comp/` and their relaxed versions in
6
+ `dft/*/runs/agm*/` are derived from Alexandria entries with the IDs used as file names.
7
+ - **Materials Project**: A. Jain et al., APL Materials 1, 011002 (2013). https://materialsproject.org (CC BY 4.0).
8
+ Used for novelty matching; IDs only.
9
+ - **CrystaLLM**: L. M. Antunes, K. T. Butler, R. Grau-Crespo, "Crystal structure generation with autoregressive
10
+ large language modeling", Nat. Commun. 15, 10570 (2024).
11
+ - **MACE**: I. Batatia et al., "MACE: Higher order equivariant message passing neural networks for fast and
12
+ accurate force fields", NeurIPS 2022; foundation model: Batatia et al., arXiv:2401.00096.
13
+ - **Quantum ESPRESSO**: P. Giannozzi et al., J. Phys.: Condens. Matter 29, 465901 (2017).
14
+ - **SSSP**: G. Prandini et al., npj Comput. Mater. 4, 72 (2018). Not redistributed.
15
+ - **phonopy**: A. Togo, J. Phys. Soc. Jpn. 92, 012001 (2023).
16
+ - **pymatgen**: S. P. Ong et al., Comput. Mater. Sci. 68, 314 (2013).
17
+ - **OPTIMADE**: C. W. Andersen et al., Sci. Data 8, 217 (2021).
18
+ - Checked but not redistributed: beta-Ca2CdP2, CCDC deposition 2054635 (used as an extra competitor for lab id
19
+ 1856; only the resulting energy difference is published).
LICENSE ADDED
@@ -0,0 +1,396 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ Attribution 4.0 International
2
+
3
+ =======================================================================
4
+
5
+ Creative Commons Corporation ("Creative Commons") is not a law firm and
6
+ does not provide legal services or legal advice. Distribution of
7
+ Creative Commons public licenses does not create a lawyer-client or
8
+ other relationship. Creative Commons makes its licenses and related
9
+ information available on an "as-is" basis. Creative Commons gives no
10
+ warranties regarding its licenses, any material licensed under their
11
+ terms and conditions, or any related information. Creative Commons
12
+ disclaims all liability for damages resulting from their use to the
13
+ fullest extent possible.
14
+
15
+ Using Creative Commons Public Licenses
16
+
17
+ Creative Commons public licenses provide a standard set of terms and
18
+ conditions that creators and other rights holders may use to share
19
+ original works of authorship and other material subject to copyright
20
+ and certain other rights specified in the public license below. The
21
+ following considerations are for informational purposes only, are not
22
+ exhaustive, and do not form part of our licenses.
23
+
24
+ Considerations for licensors: Our public licenses are
25
+ intended for use by those authorized to give the public
26
+ permission to use material in ways otherwise restricted by
27
+ copyright and certain other rights. Our licenses are
28
+ irrevocable. Licensors should read and understand the terms
29
+ and conditions of the license they choose before applying it.
30
+ Licensors should also secure all rights necessary before
31
+ applying our licenses so that the public can reuse the
32
+ material as expected. Licensors should clearly mark any
33
+ material not subject to the license. This includes other CC-
34
+ licensed material, or material used under an exception or
35
+ limitation to copyright. More considerations for licensors:
36
+ wiki.creativecommons.org/Considerations_for_licensors
37
+
38
+ Considerations for the public: By using one of our public
39
+ licenses, a licensor grants the public permission to use the
40
+ licensed material under specified terms and conditions. If
41
+ the licensor's permission is not necessary for any reason--for
42
+ example, because of any applicable exception or limitation to
43
+ copyright--then that use is not regulated by the license. Our
44
+ licenses grant only permissions under copyright and certain
45
+ other rights that a licensor has authority to grant. Use of
46
+ the licensed material may still be restricted for other
47
+ reasons, including because others have copyright or other
48
+ rights in the material. A licensor may make special requests,
49
+ such as asking that all changes be marked or described.
50
+ Although not required by our licenses, you are encouraged to
51
+ respect those requests where reasonable. More considerations
52
+ for the public:
53
+ wiki.creativecommons.org/Considerations_for_licensees
54
+
55
+ =======================================================================
56
+
57
+ Creative Commons Attribution 4.0 International Public License
58
+
59
+ By exercising the Licensed Rights (defined below), You accept and agree
60
+ to be bound by the terms and conditions of this Creative Commons
61
+ Attribution 4.0 International Public License ("Public License"). To the
62
+ extent this Public License may be interpreted as a contract, You are
63
+ granted the Licensed Rights in consideration of Your acceptance of
64
+ these terms and conditions, and the Licensor grants You such rights in
65
+ consideration of benefits the Licensor receives from making the
66
+ Licensed Material available under these terms and conditions.
67
+
68
+
69
+ Section 1 -- Definitions.
70
+
71
+ a. Adapted Material means material subject to Copyright and Similar
72
+ Rights that is derived from or based upon the Licensed Material
73
+ and in which the Licensed Material is translated, altered,
74
+ arranged, transformed, or otherwise modified in a manner requiring
75
+ permission under the Copyright and Similar Rights held by the
76
+ Licensor. For purposes of this Public License, where the Licensed
77
+ Material is a musical work, performance, or sound recording,
78
+ Adapted Material is always produced where the Licensed Material is
79
+ synched in timed relation with a moving image.
80
+
81
+ b. Adapter's License means the license You apply to Your Copyright
82
+ and Similar Rights in Your contributions to Adapted Material in
83
+ accordance with the terms and conditions of this Public License.
84
+
85
+ c. Copyright and Similar Rights means copyright and/or similar rights
86
+ closely related to copyright including, without limitation,
87
+ performance, broadcast, sound recording, and Sui Generis Database
88
+ Rights, without regard to how the rights are labeled or
89
+ categorized. For purposes of this Public License, the rights
90
+ specified in Section 2(b)(1)-(2) are not Copyright and Similar
91
+ Rights.
92
+
93
+ d. Effective Technological Measures means those measures that, in the
94
+ absence of proper authority, may not be circumvented under laws
95
+ fulfilling obligations under Article 11 of the WIPO Copyright
96
+ Treaty adopted on December 20, 1996, and/or similar international
97
+ agreements.
98
+
99
+ e. Exceptions and Limitations means fair use, fair dealing, and/or
100
+ any other exception or limitation to Copyright and Similar Rights
101
+ that applies to Your use of the Licensed Material.
102
+
103
+ f. Licensed Material means the artistic or literary work, database,
104
+ or other material to which the Licensor applied this Public
105
+ License.
106
+
107
+ g. Licensed Rights means the rights granted to You subject to the
108
+ terms and conditions of this Public License, which are limited to
109
+ all Copyright and Similar Rights that apply to Your use of the
110
+ Licensed Material and that the Licensor has authority to license.
111
+
112
+ h. Licensor means the individual(s) or entity(ies) granting rights
113
+ under this Public License.
114
+
115
+ i. Share means to provide material to the public by any means or
116
+ process that requires permission under the Licensed Rights, such
117
+ as reproduction, public display, public performance, distribution,
118
+ dissemination, communication, or importation, and to make material
119
+ available to the public including in ways that members of the
120
+ public may access the material from a place and at a time
121
+ individually chosen by them.
122
+
123
+ j. Sui Generis Database Rights means rights other than copyright
124
+ resulting from Directive 96/9/EC of the European Parliament and of
125
+ the Council of 11 March 1996 on the legal protection of databases,
126
+ as amended and/or succeeded, as well as other essentially
127
+ equivalent rights anywhere in the world.
128
+
129
+ k. You means the individual or entity exercising the Licensed Rights
130
+ under this Public License. Your has a corresponding meaning.
131
+
132
+
133
+ Section 2 -- Scope.
134
+
135
+ a. License grant.
136
+
137
+ 1. Subject to the terms and conditions of this Public License,
138
+ the Licensor hereby grants You a worldwide, royalty-free,
139
+ non-sublicensable, non-exclusive, irrevocable license to
140
+ exercise the Licensed Rights in the Licensed Material to:
141
+
142
+ a. reproduce and Share the Licensed Material, in whole or
143
+ in part; and
144
+
145
+ b. produce, reproduce, and Share Adapted Material.
146
+
147
+ 2. Exceptions and Limitations. For the avoidance of doubt, where
148
+ Exceptions and Limitations apply to Your use, this Public
149
+ License does not apply, and You do not need to comply with
150
+ its terms and conditions.
151
+
152
+ 3. Term. The term of this Public License is specified in Section
153
+ 6(a).
154
+
155
+ 4. Media and formats; technical modifications allowed. The
156
+ Licensor authorizes You to exercise the Licensed Rights in
157
+ all media and formats whether now known or hereafter created,
158
+ and to make technical modifications necessary to do so. The
159
+ Licensor waives and/or agrees not to assert any right or
160
+ authority to forbid You from making technical modifications
161
+ necessary to exercise the Licensed Rights, including
162
+ technical modifications necessary to circumvent Effective
163
+ Technological Measures. For purposes of this Public License,
164
+ simply making modifications authorized by this Section 2(a)
165
+ (4) never produces Adapted Material.
166
+
167
+ 5. Downstream recipients.
168
+
169
+ a. Offer from the Licensor -- Licensed Material. Every
170
+ recipient of the Licensed Material automatically
171
+ receives an offer from the Licensor to exercise the
172
+ Licensed Rights under the terms and conditions of this
173
+ Public License.
174
+
175
+ b. No downstream restrictions. You may not offer or impose
176
+ any additional or different terms or conditions on, or
177
+ apply any Effective Technological Measures to, the
178
+ Licensed Material if doing so restricts exercise of the
179
+ Licensed Rights by any recipient of the Licensed
180
+ Material.
181
+
182
+ 6. No endorsement. Nothing in this Public License constitutes or
183
+ may be construed as permission to assert or imply that You
184
+ are, or that Your use of the Licensed Material is, connected
185
+ with, or sponsored, endorsed, or granted official status by,
186
+ the Licensor or others designated to receive attribution as
187
+ provided in Section 3(a)(1)(A)(i).
188
+
189
+ b. Other rights.
190
+
191
+ 1. Moral rights, such as the right of integrity, are not
192
+ licensed under this Public License, nor are publicity,
193
+ privacy, and/or other similar personality rights; however, to
194
+ the extent possible, the Licensor waives and/or agrees not to
195
+ assert any such rights held by the Licensor to the limited
196
+ extent necessary to allow You to exercise the Licensed
197
+ Rights, but not otherwise.
198
+
199
+ 2. Patent and trademark rights are not licensed under this
200
+ Public License.
201
+
202
+ 3. To the extent possible, the Licensor waives any right to
203
+ collect royalties from You for the exercise of the Licensed
204
+ Rights, whether directly or through a collecting society
205
+ under any voluntary or waivable statutory or compulsory
206
+ licensing scheme. In all other cases the Licensor expressly
207
+ reserves any right to collect such royalties.
208
+
209
+
210
+ Section 3 -- License Conditions.
211
+
212
+ Your exercise of the Licensed Rights is expressly made subject to the
213
+ following conditions.
214
+
215
+ a. Attribution.
216
+
217
+ 1. If You Share the Licensed Material (including in modified
218
+ form), You must:
219
+
220
+ a. retain the following if it is supplied by the Licensor
221
+ with the Licensed Material:
222
+
223
+ i. identification of the creator(s) of the Licensed
224
+ Material and any others designated to receive
225
+ attribution, in any reasonable manner requested by
226
+ the Licensor (including by pseudonym if
227
+ designated);
228
+
229
+ ii. a copyright notice;
230
+
231
+ iii. a notice that refers to this Public License;
232
+
233
+ iv. a notice that refers to the disclaimer of
234
+ warranties;
235
+
236
+ v. a URI or hyperlink to the Licensed Material to the
237
+ extent reasonably practicable;
238
+
239
+ b. indicate if You modified the Licensed Material and
240
+ retain an indication of any previous modifications; and
241
+
242
+ c. indicate the Licensed Material is licensed under this
243
+ Public License, and include the text of, or the URI or
244
+ hyperlink to, this Public License.
245
+
246
+ 2. You may satisfy the conditions in Section 3(a)(1) in any
247
+ reasonable manner based on the medium, means, and context in
248
+ which You Share the Licensed Material. For example, it may be
249
+ reasonable to satisfy the conditions by providing a URI or
250
+ hyperlink to a resource that includes the required
251
+ information.
252
+
253
+ 3. If requested by the Licensor, You must remove any of the
254
+ information required by Section 3(a)(1)(A) to the extent
255
+ reasonably practicable.
256
+
257
+ 4. If You Share Adapted Material You produce, the Adapter's
258
+ License You apply must not prevent recipients of the Adapted
259
+ Material from complying with this Public License.
260
+
261
+
262
+ Section 4 -- Sui Generis Database Rights.
263
+
264
+ Where the Licensed Rights include Sui Generis Database Rights that
265
+ apply to Your use of the Licensed Material:
266
+
267
+ a. for the avoidance of doubt, Section 2(a)(1) grants You the right
268
+ to extract, reuse, reproduce, and Share all or a substantial
269
+ portion of the contents of the database;
270
+
271
+ b. if You include all or a substantial portion of the database
272
+ contents in a database in which You have Sui Generis Database
273
+ Rights, then the database in which You have Sui Generis Database
274
+ Rights (but not its individual contents) is Adapted Material; and
275
+
276
+ c. You must comply with the conditions in Section 3(a) if You Share
277
+ all or a substantial portion of the contents of the database.
278
+
279
+ For the avoidance of doubt, this Section 4 supplements and does not
280
+ replace Your obligations under this Public License where the Licensed
281
+ Rights include other Copyright and Similar Rights.
282
+
283
+
284
+ Section 5 -- Disclaimer of Warranties and Limitation of Liability.
285
+
286
+ a. UNLESS OTHERWISE SEPARATELY UNDERTAKEN BY THE LICENSOR, TO THE
287
+ EXTENT POSSIBLE, THE LICENSOR OFFERS THE LICENSED MATERIAL AS-IS
288
+ AND AS-AVAILABLE, AND MAKES NO REPRESENTATIONS OR WARRANTIES OF
289
+ ANY KIND CONCERNING THE LICENSED MATERIAL, WHETHER EXPRESS,
290
+ IMPLIED, STATUTORY, OR OTHER. THIS INCLUDES, WITHOUT LIMITATION,
291
+ WARRANTIES OF TITLE, MERCHANTABILITY, FITNESS FOR A PARTICULAR
292
+ PURPOSE, NON-INFRINGEMENT, ABSENCE OF LATENT OR OTHER DEFECTS,
293
+ ACCURACY, OR THE PRESENCE OR ABSENCE OF ERRORS, WHETHER OR NOT
294
+ KNOWN OR DISCOVERABLE. WHERE DISCLAIMERS OF WARRANTIES ARE NOT
295
+ ALLOWED IN FULL OR IN PART, THIS DISCLAIMER MAY NOT APPLY TO YOU.
296
+
297
+ b. TO THE EXTENT POSSIBLE, IN NO EVENT WILL THE LICENSOR BE LIABLE
298
+ TO YOU ON ANY LEGAL THEORY (INCLUDING, WITHOUT LIMITATION,
299
+ NEGLIGENCE) OR OTHERWISE FOR ANY DIRECT, SPECIAL, INDIRECT,
300
+ INCIDENTAL, CONSEQUENTIAL, PUNITIVE, EXEMPLARY, OR OTHER LOSSES,
301
+ COSTS, EXPENSES, OR DAMAGES ARISING OUT OF THIS PUBLIC LICENSE OR
302
+ USE OF THE LICENSED MATERIAL, EVEN IF THE LICENSOR HAS BEEN
303
+ ADVISED OF THE POSSIBILITY OF SUCH LOSSES, COSTS, EXPENSES, OR
304
+ DAMAGES. WHERE A LIMITATION OF LIABILITY IS NOT ALLOWED IN FULL OR
305
+ IN PART, THIS LIMITATION MAY NOT APPLY TO YOU.
306
+
307
+ c. The disclaimer of warranties and limitation of liability provided
308
+ above shall be interpreted in a manner that, to the extent
309
+ possible, most closely approximates an absolute disclaimer and
310
+ waiver of all liability.
311
+
312
+
313
+ Section 6 -- Term and Termination.
314
+
315
+ a. This Public License applies for the term of the Copyright and
316
+ Similar Rights licensed here. However, if You fail to comply with
317
+ this Public License, then Your rights under this Public License
318
+ terminate automatically.
319
+
320
+ b. Where Your right to use the Licensed Material has terminated under
321
+ Section 6(a), it reinstates:
322
+
323
+ 1. automatically as of the date the violation is cured, provided
324
+ it is cured within 30 days of Your discovery of the
325
+ violation; or
326
+
327
+ 2. upon express reinstatement by the Licensor.
328
+
329
+ For the avoidance of doubt, this Section 6(b) does not affect any
330
+ right the Licensor may have to seek remedies for Your violations
331
+ of this Public License.
332
+
333
+ c. For the avoidance of doubt, the Licensor may also offer the
334
+ Licensed Material under separate terms or conditions or stop
335
+ distributing the Licensed Material at any time; however, doing so
336
+ will not terminate this Public License.
337
+
338
+ d. Sections 1, 5, 6, 7, and 8 survive termination of this Public
339
+ License.
340
+
341
+
342
+ Section 7 -- Other Terms and Conditions.
343
+
344
+ a. The Licensor shall not be bound by any additional or different
345
+ terms or conditions communicated by You unless expressly agreed.
346
+
347
+ b. Any arrangements, understandings, or agreements regarding the
348
+ Licensed Material not stated herein are separate from and
349
+ independent of the terms and conditions of this Public License.
350
+
351
+
352
+ Section 8 -- Interpretation.
353
+
354
+ a. For the avoidance of doubt, this Public License does not, and
355
+ shall not be interpreted to, reduce, limit, restrict, or impose
356
+ conditions on any use of the Licensed Material that could lawfully
357
+ be made without permission under this Public License.
358
+
359
+ b. To the extent possible, if any provision of this Public License is
360
+ deemed unenforceable, it shall be automatically reformed to the
361
+ minimum extent necessary to make it enforceable. If the provision
362
+ cannot be reformed, it shall be severed from this Public License
363
+ without affecting the enforceability of the remaining terms and
364
+ conditions.
365
+
366
+ c. No term or condition of this Public License will be waived and no
367
+ failure to comply consented to unless expressly agreed to by the
368
+ Licensor.
369
+
370
+ d. Nothing in this Public License constitutes or may be interpreted
371
+ as a limitation upon, or waiver of, any privileges and immunities
372
+ that apply to the Licensor or You, including from the legal
373
+ processes of any jurisdiction or authority.
374
+
375
+
376
+ =======================================================================
377
+
378
+ Creative Commons is not a party to its public
379
+ licenses. Notwithstanding, Creative Commons may elect to apply one of
380
+ its public licenses to material it publishes and in those instances
381
+ will be considered the “Licensor.” The text of the Creative Commons
382
+ public licenses is dedicated to the public domain under the CC0 Public
383
+ Domain Dedication. Except for the limited purpose of indicating that
384
+ material is shared under a Creative Commons public license or as
385
+ otherwise permitted by the Creative Commons policies published at
386
+ creativecommons.org/policies, Creative Commons does not authorize the
387
+ use of the trademark "Creative Commons" or any other trademark or logo
388
+ of Creative Commons without its prior written consent including,
389
+ without limitation, in connection with any unauthorized modifications
390
+ to any of its public licenses or any other arrangements,
391
+ understandings, or agreements concerning use of licensed material. For
392
+ the avoidance of doubt, this paragraph does not form part of the
393
+ public licenses.
394
+
395
+ Creative Commons may be contacted at creativecommons.org.
396
+
METHODS.md ADDED
@@ -0,0 +1,52 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ # Methods
2
+
3
+ ## 1. Generation
4
+ Structures come from **CrystaLLM** (a language model trained on CIF files), prompted with a composition. Most
5
+ prompts are picked automatically ("autopilot"); a few were typed by a person. `origin` and `prompt` record which.
6
+
7
+ ## 2. ML screen
8
+ Each structure is relaxed with **MACE** (float64). The verdict comes from the formation energy relative to the
9
+ elements and from how much the cell changed in relaxation:
10
+ `rock solid` / `plausible` / `borderline` / `unstable` / `falls apart`.
11
+
12
+ ## 3. Novelty
13
+ Composition and structure are matched (pymatgen StructureMatcher) against a local index of known structures and,
14
+ since 2026-10-28, live against **Materials Project** and **Alexandria** via OPTIMADE. `known` and `rediscovered`
15
+ records include the matching ID. Before 2026-10-28 only the local index was used, which missed some known
16
+ compounds; affected records were re-audited.
17
+
18
+ ## 4. ML convex hull
19
+ Nightly, catalogued structures get an energy above the hull: MACE energies of the candidate vs MACE-relaxed
20
+ Alexandria phases near the hull in the same chemical system. `decomposes_to` lists the hull products and
21
+ fractions. Values below about -0.15 eV/atom are flagged `suspect` (almost always an ML artefact).
22
+
23
+ ## 5. DFT re-check
24
+ Candidates with ML e_hull ≤ 0.025 eV/atom and ≤ 30 atoms go to DFT, together with their decomposition products
25
+ on **Alexandria's PBE hull** (≤ 64 atoms each).
26
+
27
+ - Code: Quantum ESPRESSO 6.7, PBE, SSSP 1.1.2 efficiency pseudopotentials; cutoffs = max over the elements of the
28
+ SSSP-recommended wavefunction/charge cutoffs.
29
+ - Smearing: Marzari-Vanderbilt, 0.01 Ry. Spin: non-magnetic, except systems containing Fe/Co/Ni/Mn/Cr, which
30
+ are run spin-polarised from a 2 μB start on those atoms.
31
+ - Each structure: `vc-relax` on a coarse k-grid (spacing 0.4 Å⁻¹; forces 1e-3 Ry/bohr, pressure 0.5 kbar),
32
+ then an `scf` on a finer grid (0.25 Å⁻¹, conv_thr 1e-7). Energies come from the final scf only.
33
+ - Candidate and competitors are computed with identical settings, so the hull is internally consistent.
34
+ - **Pass**: e_hull ≤ 0.025 eV/atom. That margin is about the size of PBE's typical error and of entropy at room
35
+ temperature; a pass means "worth a closer look", nothing more.
36
+ - Some jobs carry a `note` (e.g. a relaxation stopped by hand when it was clearly not going to pass, or an
37
+ extra competitor checked afterwards). Read it before using the number.
38
+
39
+ ## 6. Properties (passes only)
40
+ PBE band gap and density of states at the Fermi level; elastic tensor from ±1% strains in the six Voigt directions (ions relaxed at
41
+ fixed cell), with Born stability check. PBE underestimates band gaps, often by a factor of ~2.
42
+
43
+ ## 7. Phonons (passes only)
44
+ phonopy finite displacements on a supercell with every side ≥ 7 Å, after a tight fixed-cell relaxation;
45
+ frequencies on a 10×10×10 mesh. Any mode softer than -0.1 THz away from the Γ acoustic modes = unstable. The
46
+ supercell is small, so long-wavelength instabilities can be missed.
47
+
48
+ ## Known limits
49
+ - Hulls only include competitors that exist in Alexandria (and, for the ML hull, phases near its hull). A missing
50
+ competitor can make a candidate look more stable than it is.
51
+ - PBE alone; no van der Waals, no Hubbard U, no finite-temperature free energies.
52
+ - Pass ≠ synthesisable. No candidate here has been made in a lab.
build.log ADDED
@@ -0,0 +1,8 @@
 
 
 
 
 
 
 
 
 
1
+ excluded (restricted source) dft/1856/comp/beta_Ca2CdP2_CCDC2054635.cif
2
+ excluded (restricted source) dft/1856/comp/beta_Ca2CdP2_prim.cif
3
+ excluded (restricted source) dft/1856/runs/beta_Ca2CdP2/energy.json
4
+ excluded (restricted source) dft/1856/runs/beta_Ca2CdP2/relax.in
5
+ excluded (restricted source) dft/1856/runs/beta_Ca2CdP2/relax.out
6
+ excluded (restricted source) dft/1856/runs/beta_Ca2CdP2/relaxed.cif
7
+ excluded (restricted source) dft/1856/runs/beta_Ca2CdP2/scf.in
8
+ excluded (restricted source) dft/1856/runs/beta_Ca2CdP2/scf.out
dft/1501/candidate.cif ADDED
@@ -0,0 +1,35 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ # generated using pymatgen
2
+ data_Mg3Ni3GeP2
3
+ _symmetry_space_group_name_H-M 'P 1'
4
+ _cell_length_a 6.13814141
5
+ _cell_length_b 6.13814141
6
+ _cell_length_c 3.85104355
7
+ _cell_angle_alpha 90.00000000
8
+ _cell_angle_beta 90.00000000
9
+ _cell_angle_gamma 120.00000000
10
+ _symmetry_Int_Tables_number 1
11
+ _chemical_formula_structural Mg3Ni3GeP2
12
+ _chemical_formula_sum 'Mg3 Ni3 Ge1 P2'
13
+ _cell_volume 125.65588706
14
+ _cell_formula_units_Z 1
15
+ loop_
16
+ _symmetry_equiv_pos_site_id
17
+ _symmetry_equiv_pos_as_xyz
18
+ 1 'x, y, z'
19
+ loop_
20
+ _atom_site_type_symbol
21
+ _atom_site_label
22
+ _atom_site_symmetry_multiplicity
23
+ _atom_site_fract_x
24
+ _atom_site_fract_y
25
+ _atom_site_fract_z
26
+ _atom_site_occupancy
27
+ Mg Mg0 1 0.56332615 0.56332615 0.00000000 1
28
+ Mg Mg1 1 0.00000000 0.43667385 0.00000000 1
29
+ Mg Mg2 1 0.43667385 0.00000000 0.00000000 1
30
+ Ni Ni3 1 0.25017266 0.25017266 0.50000000 1
31
+ Ni Ni4 1 0.00000000 0.74982734 0.50000000 1
32
+ Ni Ni5 1 0.74982734 0.00000000 0.50000000 1
33
+ Ge Ge6 1 0.00000000 0.00000000 0.00000000 1
34
+ P P7 1 0.66666667 0.33333333 0.50000000 1
35
+ P P8 1 0.33333333 0.66666667 0.50000000 1
dft/1501/comp/agm003220761.cif ADDED
@@ -0,0 +1,42 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ # generated using pymatgen
2
+ data_MgNi2P
3
+ _symmetry_space_group_name_H-M 'P 1'
4
+ _cell_length_a 5.02512877
5
+ _cell_length_b 6.35631350
6
+ _cell_length_c 6.45362395
7
+ _cell_angle_alpha 90.00000000
8
+ _cell_angle_beta 90.00000000
9
+ _cell_angle_gamma 90.00000000
10
+ _symmetry_Int_Tables_number 1
11
+ _chemical_formula_structural MgNi2P
12
+ _chemical_formula_sum 'Mg4 Ni8 P4'
13
+ _cell_volume 206.13709892
14
+ _cell_formula_units_Z 4
15
+ loop_
16
+ _symmetry_equiv_pos_site_id
17
+ _symmetry_equiv_pos_as_xyz
18
+ 1 'x, y, z'
19
+ loop_
20
+ _atom_site_type_symbol
21
+ _atom_site_label
22
+ _atom_site_symmetry_multiplicity
23
+ _atom_site_fract_x
24
+ _atom_site_fract_y
25
+ _atom_site_fract_z
26
+ _atom_site_occupancy
27
+ Mg Mg0 1 0.87393780 0.75000000 0.51847958 1
28
+ Mg Mg1 1 0.37393780 0.25000000 0.98152042 1
29
+ Mg Mg2 1 0.12606220 0.25000000 0.48152042 1
30
+ Mg Mg3 1 0.62606220 0.75000000 0.01847958 1
31
+ Ni Ni4 1 0.09988630 0.55302637 0.17508438 1
32
+ Ni Ni5 1 0.59988630 0.44697363 0.32491562 1
33
+ Ni Ni6 1 0.90011370 0.05302637 0.82491562 1
34
+ Ni Ni7 1 0.40011370 0.94697363 0.67508438 1
35
+ Ni Ni8 1 0.90011370 0.44697363 0.82491562 1
36
+ Ni Ni9 1 0.40011370 0.55302637 0.67508438 1
37
+ Ni Ni10 1 0.09988630 0.94697363 0.17508438 1
38
+ Ni Ni11 1 0.59988630 0.05302637 0.32491562 1
39
+ P P12 1 0.12297403 0.75000000 0.87412679 1
40
+ P P13 1 0.62297403 0.25000000 0.62587321 1
41
+ P P14 1 0.87702597 0.25000000 0.12587321 1
42
+ P P15 1 0.37702597 0.75000000 0.37412679 1
dft/1501/comp/agm003263418.cif ADDED
@@ -0,0 +1,34 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ # generated using pymatgen
2
+ data_NiGe
3
+ _symmetry_space_group_name_H-M 'P 1'
4
+ _cell_length_a 3.41606205
5
+ _cell_length_b 5.46176131
6
+ _cell_length_c 5.87313529
7
+ _cell_angle_alpha 90.00000000
8
+ _cell_angle_beta 90.00000000
9
+ _cell_angle_gamma 90.00000000
10
+ _symmetry_Int_Tables_number 1
11
+ _chemical_formula_structural NiGe
12
+ _chemical_formula_sum 'Ni4 Ge4'
13
+ _cell_volume 109.57928755
14
+ _cell_formula_units_Z 4
15
+ loop_
16
+ _symmetry_equiv_pos_site_id
17
+ _symmetry_equiv_pos_as_xyz
18
+ 1 'x, y, z'
19
+ loop_
20
+ _atom_site_type_symbol
21
+ _atom_site_label
22
+ _atom_site_symmetry_multiplicity
23
+ _atom_site_fract_x
24
+ _atom_site_fract_y
25
+ _atom_site_fract_z
26
+ _atom_site_occupancy
27
+ Ni Ni0 1 0.25000000 0.50496329 0.68922914 1
28
+ Ni Ni1 1 0.75000000 0.49503671 0.31077086 1
29
+ Ni Ni2 1 0.25000000 0.00496329 0.81077086 1
30
+ Ni Ni3 1 0.75000000 0.99503671 0.18922914 1
31
+ Ge Ge4 1 0.25000000 0.68964914 0.08411024 1
32
+ Ge Ge5 1 0.75000000 0.31035086 0.91588976 1
33
+ Ge Ge6 1 0.25000000 0.18964914 0.41588976 1
34
+ Ge Ge7 1 0.75000000 0.81035086 0.58411024 1
dft/1501/comp/agm003272104.cif ADDED
@@ -0,0 +1,66 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ # generated using pymatgen
2
+ data_Mg3P2
3
+ _symmetry_space_group_name_H-M 'P 1'
4
+ _cell_length_a 10.45088516
5
+ _cell_length_b 10.45088516
6
+ _cell_length_c 10.45088516
7
+ _cell_angle_alpha 109.47122061
8
+ _cell_angle_beta 109.47122065
9
+ _cell_angle_gamma 109.47122065
10
+ _symmetry_Int_Tables_number 1
11
+ _chemical_formula_structural Mg3P2
12
+ _chemical_formula_sum 'Mg24 P16'
13
+ _cell_volume 878.69334191
14
+ _cell_formula_units_Z 8
15
+ loop_
16
+ _symmetry_equiv_pos_site_id
17
+ _symmetry_equiv_pos_as_xyz
18
+ 1 'x, y, z'
19
+ loop_
20
+ _atom_site_type_symbol
21
+ _atom_site_label
22
+ _atom_site_symmetry_multiplicity
23
+ _atom_site_fract_x
24
+ _atom_site_fract_y
25
+ _atom_site_fract_z
26
+ _atom_site_occupancy
27
+ P P0 1 0.50000000 0.50000000 0.00000000 1
28
+ P P1 1 0.00000000 0.00000000 0.00000000 1
29
+ P P2 1 0.50000000 0.00000000 0.50000000 1
30
+ P P3 1 0.00000000 0.50000000 0.50000000 1
31
+ P P4 1 0.02383053 0.77383053 0.25000000 1
32
+ P P5 1 0.47616947 0.72616947 0.75000000 1
33
+ P P6 1 0.77383053 0.75000000 0.52383053 1
34
+ P P7 1 0.72616947 0.25000000 0.97616947 1
35
+ P P8 1 0.75000000 0.02383053 0.27383053 1
36
+ P P9 1 0.25000000 0.47616947 0.22616947 1
37
+ P P10 1 0.97616947 0.22616947 0.75000000 1
38
+ P P11 1 0.52383053 0.27383053 0.25000000 1
39
+ P P12 1 0.22616947 0.25000000 0.47616947 1
40
+ P P13 1 0.27383053 0.75000000 0.02383053 1
41
+ P P14 1 0.25000000 0.97616947 0.72616947 1
42
+ P P15 1 0.75000000 0.52383053 0.77383053 1
43
+ Mg Mg16 1 0.46718783 0.23372553 0.97396779 1
44
+ Mg Mg17 1 0.03281217 0.00677997 0.76653770 1
45
+ Mg Mg18 1 0.74024226 0.26627447 0.73346230 1
46
+ Mg Mg19 1 0.75975774 0.49322003 0.52603221 1
47
+ Mg Mg20 1 0.23372553 0.47396779 0.96718783 1
48
+ Mg Mg21 1 0.00677997 0.26653770 0.53281217 1
49
+ Mg Mg22 1 0.26627447 0.23346230 0.24024226 1
50
+ Mg Mg23 1 0.49322003 0.02603221 0.25975774 1
51
+ Mg Mg24 1 0.47396779 0.46718783 0.73372553 1
52
+ Mg Mg25 1 0.26653770 0.03281217 0.50677997 1
53
+ Mg Mg26 1 0.23346230 0.74024226 0.76627447 1
54
+ Mg Mg27 1 0.02603221 0.75975774 0.99322003 1
55
+ Mg Mg28 1 0.53281217 0.76627447 0.02603221 1
56
+ Mg Mg29 1 0.96718783 0.99322003 0.23346230 1
57
+ Mg Mg30 1 0.25975774 0.73372553 0.26653770 1
58
+ Mg Mg31 1 0.24024226 0.50677997 0.47396779 1
59
+ Mg Mg32 1 0.76627447 0.52603221 0.03281217 1
60
+ Mg Mg33 1 0.99322003 0.73346230 0.46718783 1
61
+ Mg Mg34 1 0.73372553 0.76653770 0.75975774 1
62
+ Mg Mg35 1 0.50677997 0.97396779 0.74024226 1
63
+ Mg Mg36 1 0.52603221 0.53281217 0.26627447 1
64
+ Mg Mg37 1 0.73346230 0.96718783 0.49322003 1
65
+ Mg Mg38 1 0.76653770 0.25975774 0.23372553 1
66
+ Mg Mg39 1 0.97396779 0.24024226 0.00677997 1
dft/1501/comp/agm016490948.cif ADDED
@@ -0,0 +1,43 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ # generated using pymatgen
2
+ data_Mg4Ni7Ge6
3
+ _symmetry_space_group_name_H-M 'P 1'
4
+ _cell_length_a 6.81015366
5
+ _cell_length_b 6.81015366
6
+ _cell_length_c 6.81015366
7
+ _cell_angle_alpha 109.47122061
8
+ _cell_angle_beta 109.47122064
9
+ _cell_angle_gamma 109.47122065
10
+ _symmetry_Int_Tables_number 1
11
+ _chemical_formula_structural Mg4Ni7Ge6
12
+ _chemical_formula_sum 'Mg4 Ni7 Ge6'
13
+ _cell_volume 243.13576204
14
+ _cell_formula_units_Z 1
15
+ loop_
16
+ _symmetry_equiv_pos_site_id
17
+ _symmetry_equiv_pos_as_xyz
18
+ 1 'x, y, z'
19
+ loop_
20
+ _atom_site_type_symbol
21
+ _atom_site_label
22
+ _atom_site_symmetry_multiplicity
23
+ _atom_site_fract_x
24
+ _atom_site_fract_y
25
+ _atom_site_fract_z
26
+ _atom_site_occupancy
27
+ Mg Mg0 1 0.00000000 0.00000000 0.50000000 1
28
+ Mg Mg1 1 0.50000000 0.50000000 0.50000000 1
29
+ Mg Mg2 1 0.50000000 0.00000000 0.00000000 1
30
+ Mg Mg3 1 -0.00000000 0.50000000 0.00000000 1
31
+ Ni Ni4 1 0.50000000 0.25000000 0.75000000 1
32
+ Ni Ni5 1 0.75000000 0.50000000 0.25000000 1
33
+ Ni Ni6 1 0.75000000 0.25000000 0.50000000 1
34
+ Ni Ni7 1 0.25000000 0.50000000 0.75000000 1
35
+ Ni Ni8 1 0.50000000 0.75000000 0.25000000 1
36
+ Ni Ni9 1 0.25000000 0.75000000 0.50000000 1
37
+ Ni Ni10 1 0.00000000 0.00000000 0.00000000 1
38
+ Ge Ge11 1 -0.00000000 0.68405139 0.68405139 1
39
+ Ge Ge12 1 0.68405139 -0.00000000 0.68405139 1
40
+ Ge Ge13 1 0.31594861 0.31594861 0.00000000 1
41
+ Ge Ge14 1 0.00000000 0.31594861 0.31594861 1
42
+ Ge Ge15 1 0.31594861 0.00000000 0.31594861 1
43
+ Ge Ge16 1 0.68405139 0.68405139 0.00000000 1
dft/1501/competitors.json ADDED
@@ -0,0 +1,31 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ {
2
+ "formula": "Mg3Ni3GeP2",
3
+ "nsites": 9,
4
+ "n_entries": 1177,
5
+ "decomposition": [
6
+ {
7
+ "id": "agm003272104",
8
+ "formula": "Mg3P2",
9
+ "frac": 0.2941,
10
+ "nsites": 40
11
+ },
12
+ {
13
+ "id": "agm016490948",
14
+ "formula": "Mg4Ni7Ge6",
15
+ "frac": 0.2222,
16
+ "nsites": 17
17
+ },
18
+ {
19
+ "id": "agm003263418",
20
+ "formula": "NiGe",
21
+ "frac": 0.0654,
22
+ "nsites": 8
23
+ },
24
+ {
25
+ "id": "agm003220761",
26
+ "formula": "MgNi2P",
27
+ "frac": 0.4183,
28
+ "nsites": 16
29
+ }
30
+ ]
31
+ }
dft/1501/result.json ADDED
@@ -0,0 +1,15 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ {
2
+ "lab_id": 1501,
3
+ "formula": "Mg3Ni3GeP2",
4
+ "name": null,
5
+ "mace_e_hull": null,
6
+ "finished": 1793258949.3239908,
7
+ "vs": {
8
+ "Mg3P2": 0.2941,
9
+ "Mg4Ni7Ge6": 0.2222,
10
+ "NiGe": 0.0654,
11
+ "MgNi2P": 0.4183
12
+ },
13
+ "e_hull_dft": 0.1004,
14
+ "status": "fail"
15
+ }
dft/1501/runs/agm003220761/energy.json ADDED
@@ -0,0 +1,8 @@
 
 
 
 
 
 
 
 
 
1
+ {
2
+ "energy_eV": -39967.31407515313,
3
+ "natoms": 16,
4
+ "e_per_atom": -2497.9571296970707,
5
+ "vol_per_atom": 12.90236158933621,
6
+ "vol_change_pct": 0.14586724622207559,
7
+ "hours": 2.99
8
+ }
dft/1501/runs/agm003220761/relax.in ADDED
@@ -0,0 +1,71 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ &CONTROL
2
+ calculation = 'vc-relax'
3
+ nstep = 150
4
+ tstress = .true.
5
+ tprnfor = .true.
6
+ outdir = '/opt/dft/jobs/1501/runs/agm003220761/tmp'
7
+ prefix = 'relax'
8
+ etot_conv_thr = 1e-05
9
+ forc_conv_thr = 0.001
10
+ disk_io = 'low'
11
+ pseudo_dir = '/opt/dft/sssp'
12
+ /
13
+ &SYSTEM
14
+ ecutwfc = 45.0
15
+ ecutrho = 360.0
16
+ occupations = 'smearing'
17
+ degauss = 0.01
18
+ smearing = 'mv'
19
+ nspin = 2
20
+ starting_magnetization(1) = 0.0
21
+ starting_magnetization(2) = 2.0
22
+ starting_magnetization(3) = 0.0
23
+ ntyp = 3
24
+ nat = 16
25
+ ibrav = 0
26
+ /
27
+ &ELECTRONS
28
+ electron_maxstep = 200
29
+ conv_thr = 1e-07
30
+ mixing_beta = 0.3
31
+ /
32
+ &IONS
33
+ /
34
+ &CELL
35
+ press_conv_thr = 0.5
36
+ /
37
+ &FCP
38
+ /
39
+ &RISM
40
+ /
41
+ ATOMIC_SPECIES
42
+ Mg 24.305 Mg.pbe-n-kjpaw_psl.0.3.0.UPF
43
+ Ni 58.6934 ni_pbe_v1.4.uspp.F.UPF
44
+ P 30.973761998 P.pbe-n-rrkjus_psl.1.0.0.UPF
45
+
46
+ K_POINTS automatic
47
+ 4 3 3 0 0 0
48
+
49
+ CELL_PARAMETERS angstrom
50
+ 5.02512877000000 0.00000000000000 0.00000000000000
51
+ 0.00000000000000 6.35631350000000 0.00000000000000
52
+ 0.00000000000000 0.00000000000000 6.45362395000000
53
+
54
+ ATOMIC_POSITIONS angstrom
55
+ Mg 4.3916499820 4.7672351250 3.3460722351
56
+ Mg 1.8790855970 1.5890783750 6.3343636899
57
+ Mg 0.6334787880 1.5890783750 3.1075517149
58
+ Mg 3.1460431730 4.7672351250 0.1192602601
59
+ Ni 0.5019415199 3.5152089815 1.1299287480
60
+ Ni 3.0145059049 2.8411045185 2.0968832270
61
+ Ni 4.5231872501 0.3370522315 5.3236952020
62
+ Ni 2.0106228651 6.0192612685 4.3567407230
63
+ Ni 4.5231872501 2.8411045185 5.3236952020
64
+ Ni 2.0106228651 3.5152089815 4.3567407230
65
+ Ni 0.5019415199 6.0192612685 1.1299287480
66
+ Ni 3.0145059049 0.3370522315 2.0968832270
67
+ P 0.6179603361 4.7672351250 5.6412855873
68
+ P 3.1305247211 1.5890783750 4.0391503377
69
+ P 4.4071684339 1.5890783750 0.8123383627
70
+ P 1.8946040489 4.7672351250 2.4144736123
71
+
dft/1501/runs/agm003220761/relax.out.gz ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:bbe4574446f73a4e4f69deb1eb68f101d94fc51f2de11e80dfae5b81ac26193e
3
+ size 72326
dft/1501/runs/agm003220761/relaxed.cif ADDED
@@ -0,0 +1,41 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ data_image0
2
+ _chemical_formula_structural Mg4Ni8P4
3
+ _chemical_formula_sum "Mg4 Ni8 P4"
4
+ _cell_length_a 5.038709805
5
+ _cell_length_b 6.368325252
6
+ _cell_length_c 6.433459301
7
+ _cell_angle_alpha 90.0
8
+ _cell_angle_beta 90.0
9
+ _cell_angle_gamma 90.0
10
+
11
+ _space_group_name_H-M_alt "P 1"
12
+ _space_group_IT_number 1
13
+
14
+ loop_
15
+ _space_group_symop_operation_xyz
16
+ 'x, y, z'
17
+
18
+ loop_
19
+ _atom_site_type_symbol
20
+ _atom_site_label
21
+ _atom_site_symmetry_multiplicity
22
+ _atom_site_fract_x
23
+ _atom_site_fract_y
24
+ _atom_site_fract_z
25
+ _atom_site_occupancy
26
+ Mg Mg1 1.0 0.8735418196206282 0.7499999999842974 0.5179040108300826 1.0000
27
+ Mg Mg2 1.0 0.3735418196206281 0.25 0.9820959892787235 1.0000
28
+ Mg Mg3 1.0 0.1264581803992183 0.25 0.482095989247636 1.0000
29
+ Mg Mg4 1.0 0.6264581803992183 0.7499999999842974 0.017904010798995184 1.0000
30
+ Ni Ni1 1.0 0.10006317075448247 0.5532603513762868 0.17515888023490583 1.0000
31
+ Ni Ni2 1.0 0.6000631707544826 0.4467396485923078 0.32484111979618163 1.0000
32
+ Ni Ni3 1.0 0.8999368292653639 0.053260351391989494 0.8248411198428128 1.0000
33
+ Ni Ni4 1.0 0.39993682926536395 0.9467396485923079 0.6751588802659934 1.0000
34
+ Ni Ni5 1.0 0.8999368292653639 0.4467396485923078 0.8248411198428128 1.0000
35
+ Ni Ni6 1.0 0.39993682926536395 0.5532603513762868 0.6751588802659934 1.0000
36
+ Ni Ni7 1.0 0.10006317075448247 0.9467396485923079 0.17515888023490583 1.0000
37
+ Ni Ni8 1.0 0.6000631707544826 0.053260351391989494 0.32484111979618163 1.0000
38
+ P P1 1.0 0.12191944866330719 0.7499999999842974 0.8738507983607123 1.0000
39
+ P P2 1.0 0.6219194486831536 0.25 0.626149201748094 1.0000
40
+ P P3 1.0 0.8780805513565392 0.25 0.12614920170146268 1.0000
41
+ P P4 1.0 0.3780805513366928 0.7499999999842974 0.3738507983296248 1.0000
dft/1501/runs/agm003220761/scf.in ADDED
@@ -0,0 +1,68 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ &CONTROL
2
+ calculation = 'scf'
3
+ tstress = .true.
4
+ tprnfor = .true.
5
+ outdir = '/opt/dft/jobs/1501/runs/agm003220761/tmp'
6
+ prefix = 'scf'
7
+ disk_io = 'low'
8
+ pseudo_dir = '/opt/dft/sssp'
9
+ /
10
+ &SYSTEM
11
+ ecutwfc = 45.0
12
+ ecutrho = 360.0
13
+ occupations = 'smearing'
14
+ degauss = 0.01
15
+ smearing = 'mv'
16
+ nspin = 2
17
+ starting_magnetization(1) = 0.0
18
+ starting_magnetization(2) = 2.0
19
+ starting_magnetization(3) = 0.0
20
+ ntyp = 3
21
+ nat = 16
22
+ ibrav = 0
23
+ /
24
+ &ELECTRONS
25
+ electron_maxstep = 200
26
+ conv_thr = 1e-08
27
+ mixing_beta = 0.3
28
+ /
29
+ &IONS
30
+ /
31
+ &CELL
32
+ press_conv_thr = 0.5
33
+ /
34
+ &FCP
35
+ /
36
+ &RISM
37
+ /
38
+ ATOMIC_SPECIES
39
+ Mg 24.305 Mg.pbe-n-kjpaw_psl.0.3.0.UPF
40
+ Ni 58.6934 ni_pbe_v1.4.uspp.F.UPF
41
+ P 30.973761998 P.pbe-n-rrkjus_psl.1.0.0.UPF
42
+
43
+ K_POINTS automatic
44
+ 5 4 4 0 0 0
45
+
46
+ CELL_PARAMETERS angstrom
47
+ 5.03870980500000 0.00000000000000 0.00000000000000
48
+ 0.00000000000000 6.36832525200000 0.00000000000000
49
+ 0.00000000000000 0.00000000000000 6.43345930100000
50
+
51
+ ATOMIC_POSITIONS angstrom
52
+ Mg 4.4015237316 4.7762439389 3.3319143755
53
+ Mg 1.8821688291 1.5920813130 6.3182745767
54
+ Mg 0.6371860735 1.5920813130 3.1015449260
55
+ Mg 3.1565409760 4.7762439389 0.1151847248
56
+ Ni 0.5041892796 3.5233418666 1.1268775272
57
+ Ni 3.0235441821 2.8449833852 2.0898521235
58
+ Ni 4.5345205255 0.3391792407 5.3065817743
59
+ Ni 2.0151656230 6.0291460112 4.3436071779
60
+ Ni 4.5345205255 2.8449833852 5.3065817743
61
+ Ni 2.0151656230 3.5233418666 4.3436071779
62
+ Ni 0.5041892796 6.0291460112 1.1268775272
63
+ Ni 3.0235441821 0.3391792407 2.0898521235
64
+ P 0.6143167214 4.7762439389 5.6218835464
65
+ P 3.1336716240 1.5920813130 4.0283054058
66
+ P 4.4243930837 1.5920813130 0.8115757550
67
+ P 1.9050381811 4.7762439389 2.4051538957
68
+
dft/1501/runs/agm003220761/scf.out.gz ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:8981b6308c786dfade41c6ab8909f6bcfabbe8cad5d4137de5f96afbd464948b
3
+ size 15841
dft/1501/runs/agm003263418/energy.json ADDED
@@ -0,0 +1,8 @@
 
 
 
 
 
 
 
 
 
1
+ {
2
+ "energy_eV": -30312.030503818904,
3
+ "natoms": 8,
4
+ "e_per_atom": -3789.003812977363,
5
+ "vol_per_atom": 13.697200223701438,
6
+ "vol_change_pct": -0.0015383956459391612,
7
+ "hours": 0.59
8
+ }
dft/1501/runs/agm003263418/relax.in ADDED
@@ -0,0 +1,61 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ &CONTROL
2
+ calculation = 'vc-relax'
3
+ nstep = 150
4
+ tstress = .true.
5
+ tprnfor = .true.
6
+ outdir = '/opt/dft/jobs/1501/runs/agm003263418/tmp'
7
+ prefix = 'relax'
8
+ etot_conv_thr = 1e-05
9
+ forc_conv_thr = 0.001
10
+ disk_io = 'low'
11
+ pseudo_dir = '/opt/dft/sssp'
12
+ /
13
+ &SYSTEM
14
+ ecutwfc = 45.0
15
+ ecutrho = 360.0
16
+ occupations = 'smearing'
17
+ degauss = 0.01
18
+ smearing = 'mv'
19
+ nspin = 2
20
+ starting_magnetization(1) = 2.0
21
+ starting_magnetization(2) = 0.0
22
+ ntyp = 2
23
+ nat = 8
24
+ ibrav = 0
25
+ /
26
+ &ELECTRONS
27
+ electron_maxstep = 200
28
+ conv_thr = 1e-07
29
+ mixing_beta = 0.3
30
+ /
31
+ &IONS
32
+ /
33
+ &CELL
34
+ press_conv_thr = 0.5
35
+ /
36
+ &FCP
37
+ /
38
+ &RISM
39
+ /
40
+ ATOMIC_SPECIES
41
+ Ni 58.6934 ni_pbe_v1.4.uspp.F.UPF
42
+ Ge 72.63 ge_pbe_v1.4.uspp.F.UPF
43
+
44
+ K_POINTS automatic
45
+ 5 3 3 0 0 0
46
+
47
+ CELL_PARAMETERS angstrom
48
+ 3.41606205000000 0.00000000000000 0.00000000000000
49
+ 0.00000000000000 5.46176131000000 0.00000000000000
50
+ 0.00000000000000 0.00000000000000 5.87313529000000
51
+
52
+ ATOMIC_POSITIONS angstrom
53
+ Ni 0.8540155125 2.7579889603 4.0479359850
54
+ Ni 2.5620465375 2.7037723497 1.8251993050
55
+ Ni 0.8540155125 0.0271083053 4.7617669500
56
+ Ni 2.5620465375 5.4346530047 1.1113683400
57
+ Ge 0.8540155125 3.7666989903 0.4939908188
58
+ Ge 2.5620465375 1.6950623197 5.3791444712
59
+ Ge 0.8540155125 1.0358183353 2.4425768262
60
+ Ge 2.5620465375 4.4259429747 3.4305584638
61
+
dft/1501/runs/agm003263418/relax.out.gz ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:522436d354e235e95e34229ca662b8e6702bf7bf2388eafa62873b0b6931c368
3
+ size 54512
dft/1501/runs/agm003263418/relaxed.cif ADDED
@@ -0,0 +1,33 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ data_image0
2
+ _chemical_formula_structural Ni4Ge4
3
+ _chemical_formula_sum "Ni4 Ge4"
4
+ _cell_length_a 3.383922468
5
+ _cell_length_b 5.543534336
6
+ _cell_length_c 5.841368015
7
+ _cell_angle_alpha 90.0
8
+ _cell_angle_beta 90.0
9
+ _cell_angle_gamma 90.0
10
+
11
+ _space_group_name_H-M_alt "P 1"
12
+ _space_group_IT_number 1
13
+
14
+ loop_
15
+ _space_group_symop_operation_xyz
16
+ 'x, y, z'
17
+
18
+ loop_
19
+ _atom_site_type_symbol
20
+ _atom_site_label
21
+ _atom_site_symmetry_multiplicity
22
+ _atom_site_fract_x
23
+ _atom_site_fract_y
24
+ _atom_site_fract_z
25
+ _atom_site_occupancy
26
+ Ni Ni1 1.0 0.25 0.5052468337593066 0.688650677182167 1.0000
27
+ Ni Ni2 1.0 0.7500000000295514 0.4947531662767715 0.31134932290342954 1.0000
28
+ Ni Ni3 1.0 0.25 0.005246833741267549 0.8113493229376681 1.0000
29
+ Ni Ni4 1.0 0.7500000000295514 0.9947531662948106 0.18865067714792838 1.0000
30
+ Ge Ge1 1.0 0.25 0.6911826912692546 0.08304128311285658 1.0000
31
+ Ge Ge2 1.0 0.7500000000295514 0.3088173087487845 0.9169587169556206 1.0000
32
+ Ge Ge3 1.0 0.25 0.19118269126925458 0.41695871692138203 1.0000
33
+ Ge Ge4 1.0 0.7500000000295514 0.8088173087668237 0.5830412831470952 1.0000
dft/1501/runs/agm003263418/scf.in ADDED
@@ -0,0 +1,58 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ &CONTROL
2
+ calculation = 'scf'
3
+ tstress = .true.
4
+ tprnfor = .true.
5
+ outdir = '/opt/dft/jobs/1501/runs/agm003263418/tmp'
6
+ prefix = 'scf'
7
+ disk_io = 'low'
8
+ pseudo_dir = '/opt/dft/sssp'
9
+ /
10
+ &SYSTEM
11
+ ecutwfc = 45.0
12
+ ecutrho = 360.0
13
+ occupations = 'smearing'
14
+ degauss = 0.01
15
+ smearing = 'mv'
16
+ nspin = 2
17
+ starting_magnetization(1) = 2.0
18
+ starting_magnetization(2) = 0.0
19
+ ntyp = 2
20
+ nat = 8
21
+ ibrav = 0
22
+ /
23
+ &ELECTRONS
24
+ electron_maxstep = 200
25
+ conv_thr = 1e-08
26
+ mixing_beta = 0.3
27
+ /
28
+ &IONS
29
+ /
30
+ &CELL
31
+ press_conv_thr = 0.5
32
+ /
33
+ &FCP
34
+ /
35
+ &RISM
36
+ /
37
+ ATOMIC_SPECIES
38
+ Ni 58.6934 ni_pbe_v1.4.uspp.F.UPF
39
+ Ge 72.63 ge_pbe_v1.4.uspp.F.UPF
40
+
41
+ K_POINTS automatic
42
+ 8 5 5 0 0 0
43
+
44
+ CELL_PARAMETERS angstrom
45
+ 3.38392246800000 0.00000000000000 0.00000000000000
46
+ 0.00000000000000 5.54353433600000 0.00000000000000
47
+ 0.00000000000000 0.00000000000000 5.84136801500000
48
+
49
+ ATOMIC_POSITIONS angstrom
50
+ Ni 0.8459806170 2.8008531711 4.0226620392
51
+ Ni 2.5379418511 2.7426811651 1.8187059763
52
+ Ni 0.8459806170 0.0290860030 4.7393899840
53
+ Ni 2.5379418511 5.5144483332 1.1019780315
54
+ Ge 0.8459806170 3.8315949815 0.4850746951
55
+ Ge 2.5379418511 1.7119393546 5.3562933203
56
+ Ge 0.8459806170 1.0598278135 2.4356093126
57
+ Ge 2.5379418511 4.4837065227 3.4057587028
58
+
dft/1501/runs/agm003263418/scf.out.gz ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:fac3c00da9f96e288034476310095885e2950eace918ac761cff2c8e6fe55ef5
3
+ size 25867
dft/1501/runs/agm003272104/energy.json ADDED
@@ -0,0 +1,8 @@
 
 
 
 
 
 
 
 
 
1
+ {
2
+ "energy_eV": -14062.346267976274,
3
+ "natoms": 40,
4
+ "e_per_atom": -351.55865669940687,
5
+ "vol_per_atom": 21.904163706481185,
6
+ "vol_change_pct": -0.28756264206600823,
7
+ "hours": 1.5
8
+ }
dft/1501/runs/agm003272104/relax.in ADDED
@@ -0,0 +1,90 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ &CONTROL
2
+ calculation = 'vc-relax'
3
+ nstep = 150
4
+ tstress = .true.
5
+ tprnfor = .true.
6
+ outdir = '/opt/dft/jobs/1501/runs/agm003272104/tmp'
7
+ prefix = 'relax'
8
+ etot_conv_thr = 1e-05
9
+ forc_conv_thr = 0.001
10
+ disk_io = 'low'
11
+ pseudo_dir = '/opt/dft/sssp'
12
+ /
13
+ &SYSTEM
14
+ ecutwfc = 30.0
15
+ ecutrho = 240.0
16
+ occupations = 'smearing'
17
+ degauss = 0.01
18
+ smearing = 'mv'
19
+ ntyp = 2
20
+ nat = 40
21
+ ibrav = 0
22
+ /
23
+ &ELECTRONS
24
+ electron_maxstep = 200
25
+ conv_thr = 1e-07
26
+ mixing_beta = 0.3
27
+ /
28
+ &IONS
29
+ /
30
+ &CELL
31
+ press_conv_thr = 0.5
32
+ /
33
+ &FCP
34
+ /
35
+ &RISM
36
+ /
37
+ ATOMIC_SPECIES
38
+ P 30.973761998 P.pbe-n-rrkjus_psl.1.0.0.UPF
39
+ Mg 24.305 Mg.pbe-n-kjpaw_psl.0.3.0.UPF
40
+
41
+ K_POINTS automatic
42
+ 2 2 2 0 0 0
43
+
44
+ CELL_PARAMETERS angstrom
45
+ 10.45088516000000 0.00000000000000 0.00000000000000
46
+ -3.48362838933381 9.85318902044083 0.00000000000000
47
+ -3.48362838933381 -4.92659450858219 8.53311200093750
48
+
49
+ ATOMIC_POSITIONS angstrom
50
+ P 3.4836283853 4.9265945102 0.0000000000
51
+ P 0.0000000000 0.0000000000 0.0000000000
52
+ P 3.4836283853 -2.4632972543 4.2665560005
53
+ P -3.4836283893 2.4632972559 4.2665560005
54
+ P -3.3175949678 6.3930498547 2.1332780002
55
+ P -0.1660334255 3.4601391673 6.3998340007
56
+ P 3.6496618048 4.8091911528 4.4699045820
57
+ P 3.3175949618 -2.3458938952 8.3297634194
58
+ P 6.8012233510 -1.1142452688 2.3366265818
59
+ P 0.1660334197 3.5775425248 1.9299294187
60
+ P 6.8012233492 -1.4664553429 6.3998340007
61
+ P 3.6496618068 1.4664553445 2.1332780002
62
+ P -0.1660334235 0.1174033591 4.0632074189
63
+ P 0.1660334195 7.2724884071 0.2033485815
64
+ P -3.3175949697 6.0408397807 6.1964854192
65
+ P 3.3175949617 1.3490519871 6.6031825822
66
+ Mg 0.6753716243 -2.4954025398 8.3109762374
67
+ Mg -2.3510351687 -3.7096160975 6.5409520470
68
+ Mg 4.2534754560 -0.9898186552 6.2587159544
69
+ Mg 4.3894448510 2.2682427871 4.4886917640
70
+ Mg -2.5778119583 -0.0948480276 8.2531220793
71
+ Mg -2.7137812123 0.0012968283 4.5465459221
72
+ Mg 1.1325932536 1.1167719722 2.0500141119
73
+ Mg 4.1589999089 -1.0232207697 2.2165418885
74
+ Mg 0.7698470688 0.9885218301 6.2609621254
75
+ Mg 0.9058163959 -2.1733949041 4.3244102438
76
+ Mg -2.8082567631 3.5186233127 6.5387058760
77
+ Mg -5.8346634883 2.5928442764 8.4752577576
78
+ Mg 2.8082567570 7.4219970516 0.2221357636
79
+ Mg 5.8346635500 8.6362106093 1.9921599539
80
+ Mg -0.7698470747 5.9164131671 2.2743960466
81
+ Mg -0.9058164697 2.6583517247 4.0444202369
82
+ Mg 6.0614403396 5.0214425394 0.2799899216
83
+ Mg 6.1974095936 4.9252976835 3.9865660789
84
+ Mg 2.3510351277 3.8098225397 6.4830978890
85
+ Mg -0.6753715276 5.9498152816 6.3165701124
86
+ Mg 2.7137813125 3.9380726817 2.2721498755
87
+ Mg 2.5778119854 7.0999894159 4.2087017571
88
+ Mg 6.2918851445 1.4079711991 1.9944061250
89
+ Mg 9.3182918696 2.3337502355 0.0578542434
90
+
dft/1501/runs/agm003272104/relax.out.gz ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:067b48194b210de1315e6de14f58e83f44dd2dfe2b03665c5814f53650d5fe18
3
+ size 17754
dft/1501/runs/agm003272104/relaxed.cif ADDED
@@ -0,0 +1,65 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ data_image0
2
+ _chemical_formula_structural P16Mg24
3
+ _chemical_formula_sum "P16 Mg24"
4
+ _cell_length_a 10.440856219
5
+ _cell_length_b 10.440856781813093
6
+ _cell_length_c 10.440856686403812
7
+ _cell_angle_alpha 109.47122277539957
8
+ _cell_angle_beta 109.47122060517566
9
+ _cell_angle_gamma 109.4712200213574
10
+
11
+ _space_group_name_H-M_alt "P 1"
12
+ _space_group_IT_number 1
13
+
14
+ loop_
15
+ _space_group_symop_operation_xyz
16
+ 'x, y, z'
17
+
18
+ loop_
19
+ _atom_site_type_symbol
20
+ _atom_site_label
21
+ _atom_site_symmetry_multiplicity
22
+ _atom_site_fract_x
23
+ _atom_site_fract_y
24
+ _atom_site_fract_z
25
+ _atom_site_occupancy
26
+ P P1 1.0 0.49999999997191935 0.49999999996795214 0.9999999999765394 1.0000
27
+ P P2 1.0 0.0 0.0 0.0 1.0000
28
+ P P3 1.0 0.49999999996110794 0.9999999999695237 0.5 1.0000
29
+ P P4 1.0 1.8248069610572178e-11 0.49999999998554745 0.5000000000117303 1.0000
30
+ P P5 1.0 0.023835442663350175 0.7738354137505864 0.250000004774665 1.0000
31
+ P P6 1.0 0.47616454261828123 0.7261645217472549 0.7499999604332337 1.0000
32
+ P P7 1.0 0.7738354705823266 0.7499999852848043 0.5238355175403171 1.0000
33
+ P P8 1.0 0.7261645082824756 0.2499999286820755 0.9761645039378795 1.0000
34
+ P P9 1.0 0.7500000769172663 0.02383543602455288 0.27383543663889093 1.0000
35
+ P P10 1.0 0.250000040610892 0.47616466448291417 0.2261646646171501 1.0000
36
+ P P11 1.0 0.9761645572891589 0.2261645861708654 0.749999995190144 1.0000
37
+ P P12 1.0 0.523835457327129 0.27383547816990333 0.2500000395433057 1.0000
38
+ P P13 1.0 0.22616452936060488 0.25000001463664767 0.4761644824244919 1.0000
39
+ P P14 1.0 0.27383549166632093 0.7500000712452415 0.02383549603865997 1.0000
40
+ P P15 1.0 0.24999992303739518 0.9761645639086292 0.7261645633493787 1.0000
41
+ P P16 1.0 0.7499999593508684 0.5238353354545614 0.7738353353593891 1.0000
42
+ Mg Mg1 1.0 0.46723881057564975 0.23375927705990984 0.9739864661374311 1.0000
43
+ Mg Mg2 1.0 0.032761152645514324 0.006747668692911965 0.76652046440005 1.0000
44
+ Mg Mg3 1.0 0.7402272246600283 0.2662407356173613 0.7334795457825978 1.0000
45
+ Mg Mg4 1.0 0.7597727975399771 0.4932523476336266 0.5260135379439786 1.0000
46
+ Mg Mg5 1.0 0.2337592638859631 0.4739864707528879 0.9672388183531323 1.0000
47
+ Mg Mg6 1.0 0.006747674893284186 0.2665204482967969 0.5327611844666128 1.0000
48
+ Mg Mg7 1.0 0.266240709087553 0.23347955652082183 0.240227206191337 1.0000
49
+ Mg Mg8 1.0 0.49325235145277957 0.026013548376526106 0.2597728082442043 1.0000
50
+ Mg Mg9 1.0 0.4739864690635679 0.46723879932229345 0.7337592606493066 1.0000
51
+ Mg Mg10 1.0 0.2665204321295518 0.0327611816924794 0.506747656900196 1.0000
52
+ Mg Mg11 1.0 0.23347954303496254 0.7402272176628385 0.7662407413260284 1.0000
53
+ Mg Mg12 1.0 0.026013492800269735 0.7597727824236209 0.9932523316698377 1.0000
54
+ Mg Mg13 1.0 0.5327611893731468 0.7662407228674072 0.026013533839108278 1.0000
55
+ Mg Mg14 1.0 0.9672388472940309 0.9932523312183811 0.23347953556475917 1.0000
56
+ Mg Mg15 1.0 0.25977277529463333 0.7337592643158208 0.2665204542056718 1.0000
57
+ Mg Mg16 1.0 0.24022720239956796 0.5067476522776665 0.47398646202083033 1.0000
58
+ Mg Mg17 1.0 0.7662407360594471 0.5260135291642702 0.03276118162340687 1.0000
59
+ Mg Mg18 1.0 0.9932523250579911 0.7334795516262264 0.46723881552165675 1.0000
60
+ Mg Mg19 1.0 0.7337592908646297 0.7665204434166538 0.7597727937852023 1.0000
61
+ Mg Mg20 1.0 0.5067476484960167 0.9739864515507908 0.740227191732335 1.0000
62
+ Mg Mg21 1.0 0.5260135308852286 0.5327612006050235 0.26624073932723274 1.0000
63
+ Mg Mg22 1.0 0.7334795678158584 0.9672388182246787 0.4932523430763433 1.0000
64
+ Mg Mg23 1.0 0.7665204569258905 0.2597727822601849 0.2337592586622412 1.0000
65
+ Mg Mg24 1.0 0.9739865071543922 0.24022721750956127 0.006747668318432022 1.0000
dft/1501/runs/agm003272104/scf.in ADDED
@@ -0,0 +1,87 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ &CONTROL
2
+ calculation = 'scf'
3
+ tstress = .true.
4
+ tprnfor = .true.
5
+ outdir = '/opt/dft/jobs/1501/runs/agm003272104/tmp'
6
+ prefix = 'scf'
7
+ disk_io = 'low'
8
+ pseudo_dir = '/opt/dft/sssp'
9
+ /
10
+ &SYSTEM
11
+ ecutwfc = 30.0
12
+ ecutrho = 240.0
13
+ occupations = 'smearing'
14
+ degauss = 0.01
15
+ smearing = 'mv'
16
+ ntyp = 2
17
+ nat = 40
18
+ ibrav = 0
19
+ /
20
+ &ELECTRONS
21
+ electron_maxstep = 200
22
+ conv_thr = 1e-08
23
+ mixing_beta = 0.3
24
+ /
25
+ &IONS
26
+ /
27
+ &CELL
28
+ press_conv_thr = 0.5
29
+ /
30
+ &FCP
31
+ /
32
+ &RISM
33
+ /
34
+ ATOMIC_SPECIES
35
+ P 30.973761998 P.pbe-n-rrkjus_psl.1.0.0.UPF
36
+ Mg 24.305 Mg.pbe-n-kjpaw_psl.0.3.0.UPF
37
+
38
+ K_POINTS automatic
39
+ 3 3 3 0 0 0
40
+
41
+ CELL_PARAMETERS angstrom
42
+ 10.44085621900000 -0.00000004200000 -0.00000011500000
43
+ -3.48028544900000 9.84373422700000 -0.00000011800000
44
+ -3.48028548300000 -4.92186722600000 8.52492371300000
45
+
46
+ ATOMIC_POSITIONS angstrom
47
+ P 3.4802853849 4.9218670923 -0.0000001167
48
+ P 0.0000000000 0.0000000000 0.0000000000
49
+ P 3.4802853677 -2.4609336343 4.2624617990
50
+ P -3.4802854658 2.4609335003 4.2624617976
51
+ P -3.3143770880 6.3869633174 2.1312308749
52
+ P -0.1659082671 3.4567703124 6.3936923070
53
+ P 3.6461937028 4.8045516273 4.4656576477
54
+ P 3.3143769562 -2.3436192549 8.3217278144
55
+ P 6.7946633513 -1.1131519950 2.3344261182
56
+ P 0.1659079266 3.5740859445 1.9280364275
57
+ P 6.7946623749 -1.4650963590 6.3936926048
58
+ P 3.6461935539 1.4650966459 2.1312311728
59
+ P -0.1659084160 0.1173153311 4.0592658320
60
+ P 0.1659083306 7.2654862133 0.2031956654
61
+ P -3.3143780645 6.0350189534 6.1904973617
62
+ P 3.3143773603 1.3477810140 6.5968870523
63
+ Mg 0.6750732719 -2.4927678894 8.3031602400
64
+ Mg -2.3491393735 -3.7062896959 6.5345284789
65
+ Mg 4.2492940487 -0.9892859266 6.2528570563
66
+ Mg 4.3853422901 2.2664761922 4.4842251374
67
+ Mg -2.5752285712 -0.0948242043 8.2456370559
68
+ Mg -2.7112767509 0.0013766457 4.5417484226
69
+ Mg 1.1311462017 1.1159442777 2.0479185484
70
+ Mg 4.1553587739 -1.0224968353 2.2145433132
71
+ Mg 0.7690084759 0.9879088844 6.2552416111
72
+ Mg 0.9050567335 -2.1716523300 4.3199850823
73
+ Mg -2.8052122042 3.5152647965 6.5321437514
74
+ Mg -5.8294246920 2.5903452436 8.4674002626
75
+ Mg 2.8052120149 7.4146348478 0.2217632398
76
+ Mg 5.8294246603 8.6281566542 1.9903950008
77
+ Mg -0.7690087619 5.9111528850 2.2720664236
78
+ Mg -0.9050570033 2.6553907661 4.0406983423
79
+ Mg 6.0555138580 5.0166911626 0.2792864239
80
+ Mg 6.1915620377 4.9204903126 3.9831750573
81
+ Mg 2.3491390851 3.8059226808 6.4770049314
82
+ Mg -0.6750734871 5.9443637937 6.3103801666
83
+ Mg 2.7112768109 3.9339580740 2.2696818687
84
+ Mg 2.5752285533 7.0935192883 4.2049383975
85
+ Mg 6.2854974911 1.4066021618 1.9927797285
86
+ Mg 9.3097099788 2.3315217148 0.0575232173
87
+
dft/1501/runs/agm003272104/scf.out.gz ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:6f1756875c3aa19220f29d2ab617898059112db117100e6c2395a27b121ef4c1
3
+ size 6727
dft/1501/runs/agm016490948/energy.json ADDED
@@ -0,0 +1,8 @@
 
 
 
 
 
 
 
 
 
1
+ {
2
+ "energy_eV": -51970.88460490409,
3
+ "natoms": 17,
4
+ "e_per_atom": -3057.110859112005,
5
+ "vol_per_atom": 14.270234827354768,
6
+ "vol_change_pct": -0.22282618156805878,
7
+ "hours": 7.17
8
+ }
dft/1501/runs/agm016490948/relax.in ADDED
@@ -0,0 +1,72 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ &CONTROL
2
+ calculation = 'vc-relax'
3
+ nstep = 150
4
+ tstress = .true.
5
+ tprnfor = .true.
6
+ outdir = '/opt/dft/jobs/1501/runs/agm016490948/tmp'
7
+ prefix = 'relax'
8
+ etot_conv_thr = 1e-05
9
+ forc_conv_thr = 0.001
10
+ disk_io = 'low'
11
+ pseudo_dir = '/opt/dft/sssp'
12
+ /
13
+ &SYSTEM
14
+ ecutwfc = 45.0
15
+ ecutrho = 360.0
16
+ occupations = 'smearing'
17
+ degauss = 0.01
18
+ smearing = 'mv'
19
+ nspin = 2
20
+ starting_magnetization(1) = 0.0
21
+ starting_magnetization(2) = 2.0
22
+ starting_magnetization(3) = 0.0
23
+ ntyp = 3
24
+ nat = 17
25
+ ibrav = 0
26
+ /
27
+ &ELECTRONS
28
+ electron_maxstep = 200
29
+ conv_thr = 1e-07
30
+ mixing_beta = 0.3
31
+ /
32
+ &IONS
33
+ /
34
+ &CELL
35
+ press_conv_thr = 0.5
36
+ /
37
+ &FCP
38
+ /
39
+ &RISM
40
+ /
41
+ ATOMIC_SPECIES
42
+ Mg 24.305 Mg.pbe-n-kjpaw_psl.0.3.0.UPF
43
+ Ni 58.6934 ni_pbe_v1.4.uspp.F.UPF
44
+ Ge 72.63 ge_pbe_v1.4.uspp.F.UPF
45
+
46
+ K_POINTS automatic
47
+ 3 3 3 0 0 0
48
+
49
+ CELL_PARAMETERS angstrom
50
+ 6.81015366000000 0.00000000000000 0.00000000000000
51
+ -2.27005122173800 6.42067444459670 0.00000000000000
52
+ -2.27005122061738 -3.21033722083463 5.56046717975286
53
+
54
+ ATOMIC_POSITIONS angstrom
55
+ Mg -1.1350256103 -1.6051686104 2.7802335899
56
+ Mg 1.1350256088 1.6051686119 2.7802335899
57
+ Mg 3.4050768300 0.0000000000 0.0000000000
58
+ Mg -1.1350256109 3.2103372223 0.0000000000
59
+ Ni 1.1350256091 -0.8025843045 4.1703503848
60
+ Ni 3.4050768290 2.4077529171 1.3901167949
61
+ Ni 3.4050768293 0.0000000007 2.7802335899
62
+ Ni -1.1350256113 0.8025843067 4.1703503848
63
+ Ni 1.1350256085 4.0129215282 1.3901167949
64
+ Ni -1.1350256116 3.2103372230 2.7802335899
65
+ Ni 0.0000000000 0.0000000000 0.0000000000
66
+ Ge -3.1056633864 2.1960356403 3.8036453034
67
+ Ge 3.1056633844 -2.1960356383 3.8036453034
68
+ Ge 1.4344390546 2.0286031660 0.0000000000
69
+ Ge -1.4344390559 1.0143015835 1.7568218764
70
+ Ge 1.4344390550 -1.0143015826 1.7568218764
71
+ Ge 3.1056633836 4.3920712786 0.0000000000
72
+
dft/1501/runs/agm016490948/relax.out.gz ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:0696e1b672995ae7e5032645da59dbe953bb3c87ba400dbd6264e5d2baf4788e
3
+ size 34058
dft/1501/runs/agm016490948/relaxed.cif ADDED
@@ -0,0 +1,42 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ data_image0
2
+ _chemical_formula_structural Mg4Ni7Ge6
3
+ _chemical_formula_sum "Mg4 Ni7 Ge6"
4
+ _cell_length_a 6.805091340004528
5
+ _cell_length_b 6.805091570249672
6
+ _cell_length_c 6.805091703702483
7
+ _cell_angle_alpha 109.47115480342981
8
+ _cell_angle_beta 109.47115346314948
9
+ _cell_angle_gamma 109.47135215338128
10
+
11
+ _space_group_name_H-M_alt "P 1"
12
+ _space_group_IT_number 1
13
+
14
+ loop_
15
+ _space_group_symop_operation_xyz
16
+ 'x, y, z'
17
+
18
+ loop_
19
+ _atom_site_type_symbol
20
+ _atom_site_label
21
+ _atom_site_symmetry_multiplicity
22
+ _atom_site_fract_x
23
+ _atom_site_fract_y
24
+ _atom_site_fract_z
25
+ _atom_site_occupancy
26
+ Mg Mg1 1.0 1.7997436532554426e-11 1.7997427339594684e-11 0.5000000000359949 1.0000
27
+ Mg Mg2 1.0 0.5000000000179974 0.5000000000179974 0.5000000000359949 1.0000
28
+ Mg Mg3 1.0 0.49999999999050054 1.5586267989133964e-11 0.0 1.0000
29
+ Mg Mg4 1.0 2.938974374268699e-11 0.49999999999999994 0.0 1.0000
30
+ Ni Ni1 1.0 0.49999997641661326 0.24999929672662588 0.7499991626320434 1.0000
31
+ Ni Ni2 1.0 0.7500008138414018 0.5000001341449577 0.25000083742194895 1.0000
32
+ Ni Ni3 1.0 0.7499999970976587 0.24999999711020165 0.49999999420481694 1.0000
33
+ Ni Ni4 1.0 0.24999918622017958 0.4999998658976248 0.7499991626320434 1.0000
34
+ Ni Ni5 1.0 0.5000000236198825 0.7500007032847841 0.25000083742194895 1.0000
35
+ Ni Ni6 1.0 0.25000000296772595 0.7500000029257933 0.5000000058671729 1.0000
36
+ Ni Ni7 1.0 0.0 0.0 0.0 1.0000
37
+ Ge Ge1 1.0 1.6426094180560185e-07 0.6844747545289959 0.6844747577051962 1.0000
38
+ Ge Ge2 1.0 0.6844745934493296 3.1678735699906335e-09 0.6844747577051962 1.0000
39
+ Ge Ge3 1.0 0.3155269906664673 0.3155269629523578 0.0 1.0000
40
+ Ge Ge4 1.0 0.9999998358286373 0.3155252454914128 0.31552524236679363 1.0000
41
+ Ge Ge5 1.0 0.3155254065425808 0.9999999968681214 0.31552524236679363 1.0000
42
+ Ge Ge6 1.0 0.6844730093681181 0.6844730370632285 0.0 1.0000
dft/1501/runs/agm016490948/scf.in ADDED
@@ -0,0 +1,69 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ &CONTROL
2
+ calculation = 'scf'
3
+ tstress = .true.
4
+ tprnfor = .true.
5
+ outdir = '/opt/dft/jobs/1501/runs/agm016490948/tmp'
6
+ prefix = 'scf'
7
+ disk_io = 'low'
8
+ pseudo_dir = '/opt/dft/sssp'
9
+ /
10
+ &SYSTEM
11
+ ecutwfc = 45.0
12
+ ecutrho = 360.0
13
+ occupations = 'smearing'
14
+ degauss = 0.01
15
+ smearing = 'mv'
16
+ nspin = 2
17
+ starting_magnetization(1) = 0.0
18
+ starting_magnetization(2) = 2.0
19
+ starting_magnetization(3) = 0.0
20
+ ntyp = 3
21
+ nat = 17
22
+ ibrav = 0
23
+ /
24
+ &ELECTRONS
25
+ electron_maxstep = 200
26
+ conv_thr = 1e-08
27
+ mixing_beta = 0.3
28
+ /
29
+ &IONS
30
+ /
31
+ &CELL
32
+ press_conv_thr = 0.5
33
+ /
34
+ &FCP
35
+ /
36
+ &RISM
37
+ /
38
+ ATOMIC_SPECIES
39
+ Mg 24.305 Mg.pbe-n-kjpaw_psl.0.3.0.UPF
40
+ Ni 58.6934 ni_pbe_v1.4.uspp.F.UPF
41
+ Ge 72.63 ge_pbe_v1.4.uspp.F.UPF
42
+
43
+ K_POINTS automatic
44
+ 5 5 5 0 0 0
45
+
46
+ CELL_PARAMETERS angstrom
47
+ 6.80509134000000 -0.00000785000000 -0.00000000000000
48
+ -2.26837118300000 6.41589927100000 0.00000000000000
49
+ -2.26836008000000 -3.20794570900000 5.55633872000000
50
+
51
+ ATOMIC_POSITIONS angstrom
52
+ Mg -1.1341800400 -1.6039728545 2.7781693602
53
+ Mg 1.1341800385 1.6039728560 2.7781693602
54
+ Mg 3.4025456699 -0.0000039249 0.0000000000
55
+ Mg -1.1341855913 3.2079496355 0.0000000000
56
+ Ni 1.1341861485 -0.8019902149 4.1672493873
57
+ Ni 3.4025462279 2.4059554950 1.3890893330
58
+ Ni 3.4025456692 -0.0000039242 2.7781693278
59
+ Ni -1.1341861507 0.8019902171 4.1672493873
60
+ Ni 1.1341739286 4.0099359268 1.3890893330
61
+ Ni -1.1341855920 3.2079496362 2.7781693926
62
+ Ni 0.0000000000 0.0000000000 0.0000000000
63
+ Ge -3.1052769070 2.1957632167 3.8031735991
64
+ Ge 3.1052769050 -2.1957632147 3.8031735991
65
+ Ge 1.4314577215 2.0243867347 0.0000000000
66
+ Ge -1.4314543556 1.0121903452 1.7531651213
67
+ Ge 1.4314543547 -1.0121903443 1.7531651213
68
+ Ge 3.1052624357 4.3915046864 0.0000000000
69
+
dft/1501/runs/agm016490948/scf.out.gz ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:976f215027c839ccd4b6a12095fd8d8529c04319048cc3b9f736ecdfe009e3c7
3
+ size 13608
dft/1501/runs/candidate/energy.json ADDED
@@ -0,0 +1,8 @@
 
 
 
 
 
 
 
 
 
1
+ {
2
+ "energy_eV": -18677.51443318804,
3
+ "natoms": 9,
4
+ "e_per_atom": -2075.279381465338,
5
+ "vol_per_atom": 14.114141420383215,
6
+ "vol_change_pct": 1.0913819599011276,
7
+ "hours": 0.38
8
+ }
dft/1501/runs/candidate/relax.in ADDED
@@ -0,0 +1,66 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ &CONTROL
2
+ calculation = 'vc-relax'
3
+ nstep = 150
4
+ tstress = .true.
5
+ tprnfor = .true.
6
+ outdir = '/opt/dft/jobs/1501/runs/candidate/tmp'
7
+ prefix = 'relax'
8
+ etot_conv_thr = 1e-05
9
+ forc_conv_thr = 0.001
10
+ disk_io = 'low'
11
+ pseudo_dir = '/opt/dft/sssp'
12
+ /
13
+ &SYSTEM
14
+ ecutwfc = 45.0
15
+ ecutrho = 360.0
16
+ occupations = 'smearing'
17
+ degauss = 0.01
18
+ smearing = 'mv'
19
+ nspin = 2
20
+ starting_magnetization(1) = 0.0
21
+ starting_magnetization(2) = 2.0
22
+ starting_magnetization(3) = 0.0
23
+ starting_magnetization(4) = 0.0
24
+ ntyp = 4
25
+ nat = 9
26
+ ibrav = 0
27
+ /
28
+ &ELECTRONS
29
+ electron_maxstep = 200
30
+ conv_thr = 1e-07
31
+ mixing_beta = 0.3
32
+ /
33
+ &IONS
34
+ /
35
+ &CELL
36
+ press_conv_thr = 0.5
37
+ /
38
+ &FCP
39
+ /
40
+ &RISM
41
+ /
42
+ ATOMIC_SPECIES
43
+ Mg 24.305 Mg.pbe-n-kjpaw_psl.0.3.0.UPF
44
+ Ni 58.6934 ni_pbe_v1.4.uspp.F.UPF
45
+ Ge 72.63 ge_pbe_v1.4.uspp.F.UPF
46
+ P 30.973761998 P.pbe-n-rrkjus_psl.1.0.0.UPF
47
+
48
+ K_POINTS automatic
49
+ 3 3 5 0 0 0
50
+
51
+ CELL_PARAMETERS angstrom
52
+ 6.13814141000000 0.00000000000000 0.00000000000000
53
+ -3.06907070500000 5.31578639308123 0.00000000000000
54
+ 0.00000000000000 0.00000000000000 3.85104355000000
55
+
56
+ ATOMIC_POSITIONS angstrom
57
+ Mg 1.7288877843 2.9945214830 0.0000000000
58
+ Mg 4.7979584893 2.3212649100 0.0000000000
59
+ Mg 2.6803658413 0.0000000000 0.0000000000
60
+ Ni 0.7677975820 1.3298644219 1.9255217750
61
+ Ni -2.3012731230 3.9859219711 1.9255217750
62
+ Ni 4.6025462460 0.0000000000 1.9255217750
63
+ Ge 0.0000000000 0.0000000000 0.0000000000
64
+ P 3.0690707357 1.7719287800 1.9255217750
65
+ P -0.0000000307 3.5438576131 1.9255217750
66
+
dft/1501/runs/candidate/relax.out.gz ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:fdb4df389c3adfda478f1b79755ded04cd7ddd0c044964f762141f45570ec3fd
3
+ size 27046
dft/1501/runs/candidate/relaxed.cif ADDED
@@ -0,0 +1,34 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ data_image0
2
+ _chemical_formula_structural Mg3Ni3GeP2
3
+ _chemical_formula_sum "Mg3 Ni3 Ge1 P2"
4
+ _cell_length_a 6.150102097
5
+ _cell_length_b 6.150102097362629
6
+ _cell_length_c 3.877944964
7
+ _cell_angle_alpha 90.0
8
+ _cell_angle_beta 90.0
9
+ _cell_angle_gamma 120.00000000342824
10
+
11
+ _space_group_name_H-M_alt "P 1"
12
+ _space_group_IT_number 1
13
+
14
+ loop_
15
+ _space_group_symop_operation_xyz
16
+ 'x, y, z'
17
+
18
+ loop_
19
+ _atom_site_type_symbol
20
+ _atom_site_label
21
+ _atom_site_symmetry_multiplicity
22
+ _atom_site_fract_x
23
+ _atom_site_fract_y
24
+ _atom_site_fract_z
25
+ _atom_site_occupancy
26
+ Mg Mg1 1.0 0.563651892208131 0.5636518921566834 0.0 1.0000
27
+ Mg Mg2 1.0 3.1709967984738796e-11 0.43634810782454125 0.0 1.0000
28
+ Mg Mg3 1.0 0.4363481078320706 0.0 0.0 1.0000
29
+ Ni Ni1 1.0 0.24797587305947974 0.24797587303680316 0.49999999994842625 1.0000
30
+ Ni Ni2 1.0 5.426781349680228e-11 0.7520241269444216 0.49999999994842625 1.0000
31
+ Ni Ni3 1.0 0.752024126974424 0.0 0.49999999994842625 1.0000
32
+ Ge Ge1 1.0 0.0 0.0 0.0 1.0000
33
+ P P1 1.0 0.6666666700339402 0.33333332999758714 0.49999999994842625 1.0000
34
+ P P2 1.0 0.3333333300473591 0.6666666700024129 0.49999999994842625 1.0000
dft/1501/runs/candidate/scf.in ADDED
@@ -0,0 +1,63 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ &CONTROL
2
+ calculation = 'scf'
3
+ tstress = .true.
4
+ tprnfor = .true.
5
+ outdir = '/opt/dft/jobs/1501/runs/candidate/tmp'
6
+ prefix = 'scf'
7
+ disk_io = 'low'
8
+ pseudo_dir = '/opt/dft/sssp'
9
+ /
10
+ &SYSTEM
11
+ ecutwfc = 45.0
12
+ ecutrho = 360.0
13
+ occupations = 'smearing'
14
+ degauss = 0.01
15
+ smearing = 'mv'
16
+ nspin = 2
17
+ starting_magnetization(1) = 0.0
18
+ starting_magnetization(2) = 2.0
19
+ starting_magnetization(3) = 0.0
20
+ starting_magnetization(4) = 0.0
21
+ ntyp = 4
22
+ nat = 9
23
+ ibrav = 0
24
+ /
25
+ &ELECTRONS
26
+ electron_maxstep = 200
27
+ conv_thr = 1e-08
28
+ mixing_beta = 0.3
29
+ /
30
+ &IONS
31
+ /
32
+ &CELL
33
+ press_conv_thr = 0.5
34
+ /
35
+ &FCP
36
+ /
37
+ &RISM
38
+ /
39
+ ATOMIC_SPECIES
40
+ Mg 24.305 Mg.pbe-n-kjpaw_psl.0.3.0.UPF
41
+ Ni 58.6934 ni_pbe_v1.4.uspp.F.UPF
42
+ Ge 72.63 ge_pbe_v1.4.uspp.F.UPF
43
+ P 30.973761998 P.pbe-n-rrkjus_psl.1.0.0.UPF
44
+
45
+ K_POINTS automatic
46
+ 5 5 7 0 0 0
47
+
48
+ CELL_PARAMETERS angstrom
49
+ 6.15010209700000 0.00000000000000 -0.00000000000000
50
+ -3.07505104900000 5.32614465200000 -0.00000000000000
51
+ -0.00000000000000 0.00000000000000 3.87794496400000
52
+
53
+ ATOMIC_POSITIONS angstrom
54
+ Mg 1.7332583420 3.0020915110 0.0000000000
55
+ Mg 4.8083093905 2.3240531409 0.0000000000
56
+ Mg 2.6835854130 0.0000000000 0.0000000000
57
+ Ni 0.7625384684 1.3207553700 1.9389724818
58
+ Ni -2.3125125801 4.0053892819 1.9389724818
59
+ Ni 4.6250251603 0.0000000000 1.9389724818
60
+ Ge 0.0000000000 0.0000000000 0.0000000000
61
+ P 3.0750510793 1.7753815329 1.9389724818
62
+ P -0.0000000308 3.5507631191 1.9389724818
63
+
dft/1501/runs/candidate/scf.out.gz ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:a4a5c085e2b4b747b5bcadbac0777bc274f14120eb6970be0d74ceaf48a8efa6
3
+ size 10223
dft/1856/beta_check.json ADDED
@@ -0,0 +1,14 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ {
2
+ "beta_minus_alpha_meV_atom": 7.6,
3
+ "e_hull_vs_alpha": -0.024,
4
+ "e_hull_vs_lowest_Ca2CdP2": -0.024,
5
+ "beta": {
6
+ "energy_eV": -20444.396790078288,
7
+ "natoms": 25,
8
+ "e_per_atom": -817.7758716031316,
9
+ "vol_per_atom": 23.577043566758658,
10
+ "vol_change_pct": 1.8458678591912303,
11
+ "hours": 12.91
12
+ },
13
+ "status": "pass"
14
+ }
dft/1856/candidate.cif ADDED
@@ -0,0 +1,46 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ # generated using pymatgen
2
+ data_SrCaCdP2
3
+ _symmetry_space_group_name_H-M 'P 1'
4
+ _cell_length_a 4.28137269
5
+ _cell_length_b 16.70096046
6
+ _cell_length_c 7.01743691
7
+ _cell_angle_alpha 90.00000000
8
+ _cell_angle_beta 90.00000000
9
+ _cell_angle_gamma 90.00000000
10
+ _symmetry_Int_Tables_number 1
11
+ _chemical_formula_structural SrCaCdP2
12
+ _chemical_formula_sum 'Sr4 Ca4 Cd4 P8'
13
+ _cell_volume 501.76804447
14
+ _cell_formula_units_Z 4
15
+ loop_
16
+ _symmetry_equiv_pos_site_id
17
+ _symmetry_equiv_pos_as_xyz
18
+ 1 'x, y, z'
19
+ loop_
20
+ _atom_site_type_symbol
21
+ _atom_site_label
22
+ _atom_site_symmetry_multiplicity
23
+ _atom_site_fract_x
24
+ _atom_site_fract_y
25
+ _atom_site_fract_z
26
+ _atom_site_occupancy
27
+ Sr Sr0 1 -0.00000000 0.69981694 0.41061495 1
28
+ Sr Sr1 1 0.50000000 0.80018306 0.91061495 1
29
+ Sr Sr2 1 -0.00000000 0.30018306 0.91061495 1
30
+ Sr Sr3 1 0.50000000 0.19981694 0.41061495 1
31
+ Ca Ca4 1 -0.00000000 0.53125880 0.73932809 1
32
+ Ca Ca5 1 0.50000000 0.96874120 0.23932809 1
33
+ Ca Ca6 1 0.00000000 0.46874120 0.23932809 1
34
+ Ca Ca7 1 0.50000000 0.03125880 0.73932809 1
35
+ Cd Cd8 1 -0.00000000 0.90426234 0.57224157 1
36
+ Cd Cd9 1 0.50000000 0.59573766 0.07224157 1
37
+ Cd Cd10 1 -0.00000000 0.09573766 0.07224157 1
38
+ Cd Cd11 1 0.50000000 0.40426234 0.57224157 1
39
+ P P12 1 -0.00000000 0.94046561 0.94961523 1
40
+ P P13 1 0.50000000 0.55953439 0.44961523 1
41
+ P P14 1 0.00000000 0.05953439 0.44961523 1
42
+ P P15 1 0.50000000 0.44046561 0.94961523 1
43
+ P P16 1 -0.00000000 0.67394320 0.96810016 1
44
+ P P17 1 0.50000000 0.82605680 0.46810016 1
45
+ P P18 1 -0.00000000 0.32605680 0.46810016 1
46
+ P P19 1 0.50000000 0.17394320 0.96810016 1
dft/1856/comp/agm002177972.cif ADDED
@@ -0,0 +1,36 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ # generated using pymatgen
2
+ data_Sr2CdP2
3
+ _symmetry_space_group_name_H-M 'P 1'
4
+ _cell_length_a 4.35497634
5
+ _cell_length_b 7.57327002
6
+ _cell_length_c 8.58915525
7
+ _cell_angle_alpha 89.99999738
8
+ _cell_angle_beta 104.68566427
9
+ _cell_angle_gamma 90.00000028
10
+ _symmetry_Int_Tables_number 1
11
+ _chemical_formula_structural Sr2CdP2
12
+ _chemical_formula_sum 'Sr4 Cd2 P4'
13
+ _cell_volume 274.02797182
14
+ _cell_formula_units_Z 2
15
+ loop_
16
+ _symmetry_equiv_pos_site_id
17
+ _symmetry_equiv_pos_as_xyz
18
+ 1 'x, y, z'
19
+ loop_
20
+ _atom_site_type_symbol
21
+ _atom_site_label
22
+ _atom_site_symmetry_multiplicity
23
+ _atom_site_fract_x
24
+ _atom_site_fract_y
25
+ _atom_site_fract_z
26
+ _atom_site_occupancy
27
+ Sr Sr0 1 0.53765928 0.73582816 0.07532544 1
28
+ Sr Sr1 1 0.70309473 0.38902425 0.40624517 1
29
+ Sr Sr2 1 0.29690349 0.88902439 0.59375472 1
30
+ Sr Sr3 1 0.46233896 0.23582826 0.92467447 1
31
+ P P4 1 0.06120356 0.43790851 0.12243061 1
32
+ P P5 1 0.67570433 0.99085964 0.35133415 1
33
+ P P6 1 0.32429389 0.49085968 0.64866564 1
34
+ P P7 1 0.93879460 0.93790853 0.87756926 1
35
+ Cd Cd8 1 0.09649892 0.08073773 0.19286764 1
36
+ Cd Cd9 1 0.90349924 0.58073784 0.80713191 1
dft/1856/comp/agm003206316.cif ADDED
@@ -0,0 +1,36 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ # generated using pymatgen
2
+ data_Ca2CdP2
3
+ _symmetry_space_group_name_H-M 'P 1'
4
+ _cell_length_a 8.29963282
5
+ _cell_length_b 8.29963282
6
+ _cell_length_c 7.10849330
7
+ _cell_angle_alpha 90.00000000
8
+ _cell_angle_beta 90.00000000
9
+ _cell_angle_gamma 150.66600259
10
+ _symmetry_Int_Tables_number 1
11
+ _chemical_formula_structural Ca2CdP2
12
+ _chemical_formula_sum 'Ca4 Cd2 P4'
13
+ _cell_volume 239.88472774
14
+ _cell_formula_units_Z 2
15
+ loop_
16
+ _symmetry_equiv_pos_site_id
17
+ _symmetry_equiv_pos_as_xyz
18
+ 1 'x, y, z'
19
+ loop_
20
+ _atom_site_type_symbol
21
+ _atom_site_label
22
+ _atom_site_symmetry_multiplicity
23
+ _atom_site_fract_x
24
+ _atom_site_fract_y
25
+ _atom_site_fract_z
26
+ _atom_site_occupancy
27
+ Ca Ca0 1 0.29897839 0.70102161 0.92198415 1
28
+ Ca Ca1 1 0.70102161 0.29897839 0.42198415 1
29
+ Ca Ca2 1 0.46348909 0.53651091 0.27062527 1
30
+ Ca Ca3 1 0.53651091 0.46348909 0.77062527 1
31
+ Cd Cd4 1 0.09871264 0.90128736 0.10986373 1
32
+ Cd Cd5 1 0.90128736 0.09871264 0.60986373 1
33
+ P P6 1 0.06279797 0.93720203 0.47931586 1
34
+ P P7 1 0.93720203 0.06279797 0.97931586 1
35
+ P P8 1 0.31895524 0.68104476 0.50688000 1
36
+ P P9 1 0.68104476 0.31895524 0.00688000 1
dft/1856/competitors.json ADDED
@@ -0,0 +1,19 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ {
2
+ "formula": "SrCaCdP2",
3
+ "nsites": 20,
4
+ "n_entries": 2358,
5
+ "decomposition": [
6
+ {
7
+ "id": "agm003206316",
8
+ "formula": "Ca2CdP2",
9
+ "frac": 0.5,
10
+ "nsites": 10
11
+ },
12
+ {
13
+ "id": "agm002177972",
14
+ "formula": "Sr2CdP2",
15
+ "frac": 0.5,
16
+ "nsites": 10
17
+ }
18
+ ]
19
+ }
dft/1856/input_tmp.in ADDED
File without changes
dft/1856/job.json ADDED
@@ -0,0 +1 @@
 
 
1
+ {"name": "Cadmophosphide", "formula": "SrCaCdP2"}
dft/1856/phonon/d000/forces.npy ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:a114c49da2493fe3d5bb621f02315ffd163627d3ee99a5b6eb51a633c04d6f49
3
+ size 1088
dft/1856/phonon/d000/scf.in ADDED
@@ -0,0 +1,88 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ &CONTROL
2
+ calculation = 'scf'
3
+ tstress = .false.
4
+ tprnfor = .true.
5
+ outdir = '/opt/dft/jobs/1856/phonon/d000/tmp'
6
+ prefix = 'scf'
7
+ disk_io = 'low'
8
+ pseudo_dir = '/opt/dft/sssp'
9
+ /
10
+ &SYSTEM
11
+ ecutwfc = 60.0
12
+ ecutrho = 480.0
13
+ occupations = 'smearing'
14
+ degauss = 0.01
15
+ smearing = 'mv'
16
+ ntyp = 4
17
+ nat = 40
18
+ ibrav = 0
19
+ /
20
+ &ELECTRONS
21
+ electron_maxstep = 200
22
+ conv_thr = 1e-10
23
+ mixing_beta = 0.3
24
+ /
25
+ &IONS
26
+ /
27
+ &CELL
28
+ /
29
+ &FCP
30
+ /
31
+ &RISM
32
+ /
33
+ ATOMIC_SPECIES
34
+ Sr 87.62 Sr_pbe_v1.uspp.F.UPF
35
+ Ca 40.078 Ca_pbe_v1.uspp.F.UPF
36
+ Cd 112.414 Cd.pbe-dn-rrkjus_psl.0.3.1.UPF
37
+ P 30.973761998 P.pbe-n-rrkjus_psl.1.0.0.UPF
38
+
39
+ K_POINTS automatic
40
+ 3 2 4 0 0 0
41
+
42
+ CELL_PARAMETERS angstrom
43
+ 8.56849239209021 0.00000000000000 0.00000000000000
44
+ 0.00000000000000 16.78923252044744 0.00000000000000
45
+ 0.00000000000000 0.00000000000000 7.03293287050372
46
+
47
+ ATOMIC_POSITIONS angstrom
48
+ Sr 0.0000000000 11.7451702775 2.8955379597
49
+ Sr 4.2842461960 11.7451702775 2.8955379597
50
+ Sr 2.1421230895 13.4386784550 6.4120029275
51
+ Sr 6.4263692855 13.4386784550 6.4120029275
52
+ Ca 0.0000000000 8.9137996499 5.2021270584
53
+ Ca 4.2842461960 8.9137996499 5.2021270584
54
+ Ca 2.1421230895 16.2700489666 1.6856609722
55
+ Ca 6.4263692855 16.2700489666 1.6856609722
56
+ Cd 0.0000000000 15.1570378874 4.0393233326
57
+ Cd 4.2842461960 15.1570378874 4.0393233326
58
+ Cd 2.1421230895 10.0268118732 0.5228586122
59
+ Cd 6.4263692855 10.0268118732 0.5228586122
60
+ P 0.0000000000 15.8034462033 6.6716035617
61
+ P 4.2842461960 15.8034462033 6.6716035617
62
+ P 2.1421230895 9.3804017699 3.1551380573
63
+ P 6.4263692855 9.3804017699 3.1551380573
64
+ P 0.0000000000 11.3023985522 6.7905739191
65
+ P 4.2842461960 11.3023985522 6.7905739191
66
+ P 2.1421230895 13.8814503363 3.2741085971
67
+ P 6.4263692855 13.8814503363 3.2741085971
68
+ Sr 2.1421230895 3.3505546834 2.8955373607
69
+ Sr 6.4263692855 3.3505546834 2.8955373607
70
+ Sr 0.0000000000 5.0440613265 6.4120037382
71
+ Sr 4.2842461960 5.0440613265 6.4120037382
72
+ Ca 2.1421230895 0.5191847248 5.2021263758
73
+ Ca 6.4263692855 0.5191847248 5.2021263758
74
+ Ca 0.0000000000 7.8754314085 1.6856611008
75
+ Ca 4.2842461960 7.8754314085 1.6856611008
76
+ Cd 2.1421230895 6.7624208822 4.0393238803
77
+ Cd 6.4263692855 6.7624208822 4.0393238803
78
+ Cd 0.0000000000 1.6321938599 0.5228573815
79
+ Cd 4.2842461960 1.6321938599 0.5228573815
80
+ P 2.1421230895 7.4088304331 6.6716041492
81
+ P 6.4263692855 7.4088304331 6.6716041492
82
+ P 0.0000000000 0.9857863428 3.1551384350
83
+ P 4.2842461960 0.9857863428 3.1551384350
84
+ P 2.1421230895 2.9077816904 6.7905746851
85
+ P 6.4263692855 2.9077816904 6.7905746851
86
+ P 0.0000000000 5.4868340872 3.2741085687
87
+ P 4.2842461960 5.4868340872 3.2741085687
88
+