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---
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license: mit
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---
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---
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license: mit
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datasets:
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- fedeotto/kronos-datasets
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tags:
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- chemistry
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- molecules
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- 3d-molecule-generation
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- autoregressive
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- diffusion
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- latent-diffusion
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---
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# KRONOS — checkpoints
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Trained weights for KRONOS, a latent autoregressive diffusion model for 3D molecule generation,
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together with the Unified AutoEncoder (UAE) checkpoints its latent space is built on.
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## Contents
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```
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uae_qm9/{last.ckpt, latent_stats.pth} # autoencoder + latent statistics (QM9)
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uae_geom/{last.ckpt, latent_stats.pth} # autoencoder + latent statistics (GEOM-Drugs)
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kronos-{qm9,geom}-layers{8,10,12,16}-heads{8,10,12,16}-d{512,640,768,1024}/manual_last.ckpt
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```
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The `layers16-heads16-d1024` checkpoints (283 M parameters) are the main models reported in the
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paper; the three smaller ones are the scaling ablation.
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## Usage
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Download into the `checkpoints/` directory of the code repository — the checkpoints store
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`vae_path = checkpoints/uae_{qm9,geom}/last.ckpt` internally, so the layout must be preserved.
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```bash
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python -m kronos.scripts.test \
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--model_path checkpoints/kronos-qm9-layers16-heads16-d1024 \
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--ckpt_name manual_last.ckpt --num_samples 10000 --sampler ddim
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```
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## Citation
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```bibtex
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@article{ottomano2026autoregressive,
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title={Autoregressive latent diffusion for 3D molecule generation},
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author={Ottomano, Federico and Ren, Gaopeng and Li, Yingzhen and Jelfs, Kim E and Ganose, Alex M},
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journal={arXiv preprint arXiv:2607.09277},
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year={2026}
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}
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```
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