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  ---
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  license: mit
 
 
 
 
 
 
 
 
 
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  ---
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
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  ---
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  license: mit
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+ datasets:
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+ - fedeotto/kronos-datasets
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+ tags:
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+ - chemistry
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+ - molecules
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+ - 3d-molecule-generation
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+ - autoregressive
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+ - diffusion
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+ - latent-diffusion
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  ---
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+
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+ # KRONOS — checkpoints
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+
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+ Trained weights for KRONOS, a latent autoregressive diffusion model for 3D molecule generation,
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+ together with the Unified AutoEncoder (UAE) checkpoints its latent space is built on.
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+
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+ ## Contents
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+ ```
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+ uae_qm9/{last.ckpt, latent_stats.pth} # autoencoder + latent statistics (QM9)
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+ uae_geom/{last.ckpt, latent_stats.pth} # autoencoder + latent statistics (GEOM-Drugs)
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+ kronos-{qm9,geom}-layers{8,10,12,16}-heads{8,10,12,16}-d{512,640,768,1024}/manual_last.ckpt
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+ ```
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+ The `layers16-heads16-d1024` checkpoints (283 M parameters) are the main models reported in the
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+ paper; the three smaller ones are the scaling ablation.
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+
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+ ## Usage
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+
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+ Download into the `checkpoints/` directory of the code repository — the checkpoints store
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+ `vae_path = checkpoints/uae_{qm9,geom}/last.ckpt` internally, so the layout must be preserved.
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+
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+
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+ ```bash
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+ python -m kronos.scripts.test \
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+ --model_path checkpoints/kronos-qm9-layers16-heads16-d1024 \
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+ --ckpt_name manual_last.ckpt --num_samples 10000 --sampler ddim
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+ ```
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+
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+ ## Citation
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+
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+ ```bibtex
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+ @article{ottomano2026autoregressive,
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+ title={Autoregressive latent diffusion for 3D molecule generation},
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+ author={Ottomano, Federico and Ren, Gaopeng and Li, Yingzhen and Jelfs, Kim E and Ganose, Alex M},
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+ journal={arXiv preprint arXiv:2607.09277},
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+ year={2026}
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+ }
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+ ```