Upload jupyter_gptossVENV.pbs with huggingface_hub
Browse files- jupyter_gptossVENV.pbs +73 -0
jupyter_gptossVENV.pbs
ADDED
|
@@ -0,0 +1,73 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
#!/bin/bash
|
| 2 |
+
#PBS -N khalil_Jpytr_noDelete
|
| 3 |
+
#PBS -l select=1:ncpus=20:mem=180gb:ngpus=1
|
| 4 |
+
#PBS -l walltime=24:00:00
|
| 5 |
+
#PBS -q gpu_1d
|
| 6 |
+
#PBS -o logs/NIDS_output.log
|
| 7 |
+
#PBS -e logs/NIDS_error.err
|
| 8 |
+
|
| 9 |
+
set -euo pipefail
|
| 10 |
+
mkdir -p logs
|
| 11 |
+
|
| 12 |
+
# ---- Load & init conda ----
|
| 13 |
+
module load /app/common/modules/anaconda3-2024.10
|
| 14 |
+
eval "$("$(command -v conda)" shell.bash hook)"
|
| 15 |
+
source activate sbert_khalil
|
| 16 |
+
# ---- Diagnostics to stdout ----
|
| 17 |
+
echo "user: $(whoami)"
|
| 18 |
+
echo "node: $(hostname -s)"
|
| 19 |
+
which python || true
|
| 20 |
+
python -V || true
|
| 21 |
+
which jupyter || true
|
| 22 |
+
jupyter --version || true
|
| 23 |
+
|
| 24 |
+
# ---- Safer runtime dirs ----
|
| 25 |
+
export JUPYTER_RUNTIME_DIR="${PBS_O_WORKDIR}/.jupyter_runtime"
|
| 26 |
+
export JUPYTER_CONFIG_DIR="${PBS_O_WORKDIR}/.jupyter_config"
|
| 27 |
+
mkdir -p "$JUPYTER_RUNTIME_DIR" "$JUPYTER_CONFIG_DIR"
|
| 28 |
+
|
| 29 |
+
# ---- Port setup ----
|
| 30 |
+
port="${PORT:-8883}"
|
| 31 |
+
if ss -ltn 2>/dev/null | grep -q ":$port "; then
|
| 32 |
+
port=$(( (RANDOM % 1000) + 8000 ))
|
| 33 |
+
fi
|
| 34 |
+
|
| 35 |
+
node="$(hostname -s)"
|
| 36 |
+
user="$(whoami)"
|
| 37 |
+
login_host="172.30.30.11"
|
| 38 |
+
|
| 39 |
+
cat <<EOF
|
| 40 |
+
================ JUPYTER NOTEBOOK INFO ================
|
| 41 |
+
Compute node : ${node}
|
| 42 |
+
Chosen port : ${port}
|
| 43 |
+
Authentication : DISABLED (no token needed)
|
| 44 |
+
|
| 45 |
+
Tunnel option A (simple):
|
| 46 |
+
ssh -N -L ${port}:${node}:${port} ${user}@${login_host}
|
| 47 |
+
|
| 48 |
+
Tunnel option B (robust via ProxyJump):
|
| 49 |
+
ssh -N -J ${user}@${login_host} -L ${port}:localhost:${port} ${user}@${node}
|
| 50 |
+
|
| 51 |
+
Open in browser:
|
| 52 |
+
http://localhost:${port}
|
| 53 |
+
|
| 54 |
+
WARNING: No authentication - ensure your SSH tunnel is secure!
|
| 55 |
+
========================================================
|
| 56 |
+
EOF
|
| 57 |
+
|
| 58 |
+
# ---- Launch Jupyter Notebook ----
|
| 59 |
+
if python -c "import notebook" 2>/dev/null; then
|
| 60 |
+
echo "Launching Jupyter Notebook..."
|
| 61 |
+
exec python -m notebook \
|
| 62 |
+
--no-browser \
|
| 63 |
+
--ip=0.0.0.0 \
|
| 64 |
+
--port="${port}" \
|
| 65 |
+
--NotebookApp.token='' \
|
| 66 |
+
--NotebookApp.password='' \
|
| 67 |
+
--NotebookApp.disable_check_xsrf=True \
|
| 68 |
+
--MappingKernelManager.cull_idle_timeout=0
|
| 69 |
+
else
|
| 70 |
+
echo "ERROR: Jupyter notebook not found in environment!"
|
| 71 |
+
echo "Try: conda install jupyter notebook"
|
| 72 |
+
exit 1
|
| 73 |
+
fi
|