kaichenxu commited on
Commit
a10a452
·
verified ·
1 Parent(s): 66b8319

Add training gene scale to the topic banks for nnls inference

Browse files
topic_banks/all_genes/manifest.json CHANGED
@@ -48,10 +48,15 @@
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  },
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  "gene_representation": "projected_input",
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  "cell_input": "unmasked counts, centered by inference_mean",
 
 
 
 
 
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  "files": {
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  "genes.json": "9408f34a417bd07efd8c43ac288a0dbd64f4991d4aeed449d40d8fba50b9e99743399ff042b2754102d8f841bc62ee9c5e5e202b406707db2a456d69e42bb687",
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  }
 
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  },
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  "gene_representation": "projected_input",
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  "cell_input": "unmasked counts, centered by inference_mean",
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+ "gene_scale": {
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+ "statistic": "standard deviation of counts per million over every training cell",
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  "genes.json": "9408f34a417bd07efd8c43ac288a0dbd64f4991d4aeed449d40d8fba50b9e99743399ff042b2754102d8f841bc62ee9c5e5e202b406707db2a456d69e42bb687",
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topic_banks/default/manifest.json CHANGED
@@ -48,10 +48,15 @@
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  },
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  "gene_representation": "projected_input",
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  "cell_input": "unmasked counts, centered by inference_mean",
 
 
 
 
 
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  "gene_representation": "projected_input",
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