Instructions to use khazarai/Bio-8B-it with libraries, inference providers, notebooks, and local apps. Follow these links to get started.

Libraries

How to use khazarai/Bio-8B-it with Transformers:

# Use a pipeline as a high-level helper
from transformers import pipeline

pipe = pipeline("text-generation", model="khazarai/Bio-8B-it")
messages = [
    {"role": "user", "content": "Who are you?"},
]
pipe(messages)

# pip install -U transformers accelerate
# Load model directly
from transformers import AutoTokenizer, AutoModelForCausalLM

tokenizer = AutoTokenizer.from_pretrained("khazarai/Bio-8B-it")
model = AutoModelForCausalLM.from_pretrained("khazarai/Bio-8B-it", device_map="auto")
messages = [
    {"role": "user", "content": "Who are you?"},
]
inputs = tokenizer.apply_chat_template(
	messages,
	add_generation_prompt=True,
	tokenize=True,
	return_dict=True,
	return_tensors="pt",
).to(model.device)

outputs = model.generate(**inputs, max_new_tokens=256)
print(tokenizer.decode(outputs[0][inputs["input_ids"].shape[-1]:]))

Notebooks
Google Colab
Kaggle
Local Apps Settings

vLLM

How to use khazarai/Bio-8B-it with vLLM:

Install from pip and serve model

# Install vLLM from pip:
pip install vllm
# Start the vLLM server:
vllm serve "khazarai/Bio-8B-it"
# Call the server using curl (OpenAI-compatible API):
curl -X POST "http://localhost:8000/v1/chat/completions" \
	-H "Content-Type: application/json" \
	--data '{
		"model": "khazarai/Bio-8B-it",
		"messages": [
			{
				"role": "user",
				"content": "What is the capital of France?"
			}
		]
	}'

Use Docker

docker model run hf.co/khazarai/Bio-8B-it

SGLang

How to use khazarai/Bio-8B-it with SGLang:

Install from pip and serve model

# Install SGLang from pip:
pip install sglang
# Start the SGLang server:
python3 -m sglang.launch_server \
    --model-path "khazarai/Bio-8B-it" \
    --host 0.0.0.0 \
    --port 30000
# Call the server using curl (OpenAI-compatible API):
curl -X POST "http://localhost:30000/v1/chat/completions" \
	-H "Content-Type: application/json" \
	--data '{
		"model": "khazarai/Bio-8B-it",
		"messages": [
			{
				"role": "user",
				"content": "What is the capital of France?"
			}
		]
	}'

Use Docker images

docker run --gpus all \
    --shm-size 32g \
    -p 30000:30000 \
    -v ~/.cache/huggingface:/root/.cache/huggingface \
    --env "HF_TOKEN=<secret>" \
    --ipc=host \
    lmsysorg/sglang:latest \
    python3 -m sglang.launch_server \
        --model-path "khazarai/Bio-8B-it" \
        --host 0.0.0.0 \
        --port 30000
# Call the server using curl (OpenAI-compatible API):
curl -X POST "http://localhost:30000/v1/chat/completions" \
	-H "Content-Type: application/json" \
	--data '{
		"model": "khazarai/Bio-8B-it",
		"messages": [
			{
				"role": "user",
				"content": "What is the capital of France?"
			}
		]
	}'

Unsloth Desktop
Docker Model Runner
How to use khazarai/Bio-8B-it with Docker Model Runner:
```
docker model run hf.co/khazarai/Bio-8B-it
```

Rustamshry commited on Feb 16

Commit

5b7bba8

verified ·

1 Parent(s): cb8bf33

Update README.md

Browse files

Files changed (1) hide show

README.md +2 -1

README.md CHANGED Viewed

@@ -81,7 +81,7 @@ This model is not intended for:
 Citation
 If you use this model, please cite the original BioInstruct paper:
 @article{Tran2024Bioinstruct,
     author = {Tran, Hieu and Yang, Zhichao and Yao, Zonghai and Yu, Hong},
     title = {BioInstruct: instruction tuning of large language models for biomedical natural language processing},
@@ -89,3 +89,4 @@ If you use this model, please cite the original BioInstruct paper:
     year = {2024},
     doi = {10.1093/jamia/ocae122}
 }

 Citation
 If you use this model, please cite the original BioInstruct paper:
+```
 @article{Tran2024Bioinstruct,
     author = {Tran, Hieu and Yang, Zhichao and Yao, Zonghai and Yu, Hong},
     title = {BioInstruct: instruction tuning of large language models for biomedical natural language processing},
     year = {2024},
     doi = {10.1093/jamia/ocae122}
 }
+```