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Nov 6

EEG-FM-Bench: A Comprehensive Benchmark for the Systematic Evaluation of EEG Foundation Models

Electroencephalography foundation models (EEG-FMs) have advanced brain signal analysis, but the lack of standardized evaluation benchmarks impedes model comparison and scientific progress. Current evaluations rely on inconsistent protocols that render cross-model comparisons unreliable, while a lack of diagnostic analyses obscures the internal mechanisms driving transfer efficiency and scaling behaviors. To address this, we introduce EEG-FM-Bench, a unified system for the standardized evaluation of EEG-FMs. The benchmark integrates 14 datasets across 10 paradigms and incorporates diverse experimental settings, including multiple fine-tuning strategies, task organizations, and classifier configurations, supported by tools for gradient and representation analysis. Our experiments and analysis reveal several critical insights: (1) multi-task learning acts as a critical regularizer to mitigate overfitting in data-scarce EEG contexts; (2) pre-training efficiency is currently limited by gradient conflicts between reconstruction objectives and downstream tasks; (3) model scaling deviates from typical laws, as compact architectures with domain-specific inductive biases consistently outperform significantly larger models. This benchmark enables fair comparison and reproducible analysis, shifting the field from fragmented results to interpretable advances. Code is available at https://github.com/xw1216/EEG-FM-Bench.

  • 5 authors
·
Feb 12

Neural State Prediction: Obstructing Shortcut Learning in EEG Foundation Models

EEG foundation models increasingly use masked prediction to learn from unlabeled recordings, but optimizing this objective does not ensure transferable neural representations. A central challenge is that stable positional cues and local correlations can make masked regions predictable without integrating distributed neural context. To reduce this reliance on low-information prediction paths, we introduce Neural State Prediction (NSP), a latent-predictive framework that constrains both the prediction target and the available context. NSP uses a Target Encoder updated by an exponential moving average (EMA) to define latent supervision. Identity residualization removes additive effects associated with channel identity and relative time from the targets, while topology-separated context excludes their immediate spatial and temporal neighborhood from the visible input. We pretrain NSP on 2.2 million EEG segments from TUEG and evaluate it across 30 downstream datasets spanning clinical diagnosis, sleep staging, emotion recognition, motor imagery, event-related potentials, cognitive-state decoding, and language retrieval. Under full-parameter multi-task fine-tuning on EEG-FM-Bench, NSP achieves 63.94 macro balanced accuracy across 14 datasets, exceeding the strongest evaluated baseline by 2.35 percentage points. Controlled component ablations assess the contribution of each mechanism, while matched context controls and held-out interventions characterize the role of context geometry, signal content, and positional information. Jointly designing latent targets and their context offers a promising direction for EEG foundation models that learn from distributed signal structure.

  • 5 authors
·
Sep 25