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Oct 21

The Origins of Stochasticity: Comprehensive Investigations on Uncertainty Quantification for Large Language Models

Recent advancements in Large Language Models (LLMs) have enabled sophisticated reasoning and content generation, yet their inherent stochasticity poses significant challenges for ensuring predictive credibility. While traditional uncertainty taxonomy paradigms, such as the dichotomy of aleatoric and epistemic uncertainties, provide conceptual foundations, they often fail to capture the multi-component and multi-stage nature of LLM generation and struggle to evaluate the effectiveness of various Uncertainty Quantification (UQ) methods. In this paper, we propose a granular uncertainty taxonomy that systematically attributes LLM uncertainty into input-level, parameter-level, token-level, and decoding-process sources. Correspondingly, we categorize existing UQ methods into Bayesian, ensemble, consensus-based, and single-pass approaches. Furthermore, we introduce a comprehensive evaluation framework covering diverse generation settings and metrics. We empirically evaluate 21 typical UQ methods across three prominent LLM families, including Qwen3, Llama 3.2, and DeepSeek-V3, on benchmarks such as TriviaQA, GSM8K, and HumanEval. Our experimental results demonstrate that (i) the effectiveness of UQ methods is sensitive to task types and generation settings; (ii) consensus-based methods, typed Deg and EigV, consistently outperform other UQ approaches; and (iii) larger model scales correlate with lower uncertainty estimates, suggesting an empirical scaling law for LLM uncertainty. This work bridges the gap between theoretical origins and practical deployment, providing a versatile diagnostic tool for systematically quantifying uncertainty in LLM applications.

  • 6 authors
·
Jun 21

Gradient is All You Need?

In this paper we provide a novel analytical perspective on the theoretical understanding of gradient-based learning algorithms by interpreting consensus-based optimization (CBO), a recently proposed multi-particle derivative-free optimization method, as a stochastic relaxation of gradient descent. Remarkably, we observe that through communication of the particles, CBO exhibits a stochastic gradient descent (SGD)-like behavior despite solely relying on evaluations of the objective function. The fundamental value of such link between CBO and SGD lies in the fact that CBO is provably globally convergent to global minimizers for ample classes of nonsmooth and nonconvex objective functions, hence, on the one side, offering a novel explanation for the success of stochastic relaxations of gradient descent. On the other side, contrary to the conventional wisdom for which zero-order methods ought to be inefficient or not to possess generalization abilities, our results unveil an intrinsic gradient descent nature of such heuristics. This viewpoint furthermore complements previous insights into the working principles of CBO, which describe the dynamics in the mean-field limit through a nonlinear nonlocal partial differential equation that allows to alleviate complexities of the nonconvex function landscape. Our proofs leverage a completely nonsmooth analysis, which combines a novel quantitative version of the Laplace principle (log-sum-exp trick) and the minimizing movement scheme (proximal iteration). In doing so, we furnish useful and precise insights that explain how stochastic perturbations of gradient descent overcome energy barriers and reach deep levels of nonconvex functions. Instructive numerical illustrations support the provided theoretical insights.

  • 4 authors
·
Jun 16, 2023

When VLMs Meet Image Classification: Test Sets Renovation via Missing Label Identification

Image classification benchmark datasets such as CIFAR, MNIST, and ImageNet serve as critical tools for model evaluation. However, despite the cleaning efforts, these datasets still suffer from pervasive noisy labels and often contain missing labels due to the co-existing image pattern where multiple classes appear in an image sample. This results in misleading model comparisons and unfair evaluations. Existing label cleaning methods focus primarily on noisy labels, but the issue of missing labels remains largely overlooked. Motivated by these challenges, we present a comprehensive framework named REVEAL, integrating state-of-the-art pre-trained vision-language models (e.g., LLaVA, BLIP, Janus, Qwen) with advanced machine/human label curation methods (e.g., Docta, Cleanlab, MTurk), to systematically address both noisy labels and missing label detection in widely-used image classification test sets. REVEAL detects potential noisy labels and omissions, aggregates predictions from various methods, and refines label accuracy through confidence-informed predictions and consensus-based filtering. Additionally, we provide a thorough analysis of state-of-the-art vision-language models and pre-trained image classifiers, highlighting their strengths and limitations within the context of dataset renovation by revealing 10 observations. Our method effectively reveals missing labels from public datasets and provides soft-labeled results with likelihoods. Through human verifications, REVEAL significantly improves the quality of 6 benchmark test sets, highly aligning to human judgments and enabling more accurate and meaningful comparisons in image classification.

  • 7 authors
·
May 21, 2025

NovoBench: Benchmarking Deep Learning-based De Novo Peptide Sequencing Methods in Proteomics

Tandem mass spectrometry has played a pivotal role in advancing proteomics, enabling the high-throughput analysis of protein composition in biological tissues. Many deep learning methods have been developed for de novo peptide sequencing task, i.e., predicting the peptide sequence for the observed mass spectrum. However, two key challenges seriously hinder the further advancement of this important task. Firstly, since there is no consensus for the evaluation datasets, the empirical results in different research papers are often not comparable, leading to unfair comparison. Secondly, the current methods are usually limited to amino acid-level or peptide-level precision and recall metrics. In this work, we present the first unified benchmark NovoBench for de novo peptide sequencing, which comprises diverse mass spectrum data, integrated models, and comprehensive evaluation metrics. Recent impressive methods, including DeepNovo, PointNovo, Casanovo, InstaNovo, AdaNovo and pi-HelixNovo are integrated into our framework. In addition to amino acid-level and peptide-level precision and recall, we evaluate the models' performance in terms of identifying post-tranlational modifications (PTMs), efficiency and robustness to peptide length, noise peaks and missing fragment ratio, which are important influencing factors while seldom be considered. Leveraging this benchmark, we conduct a large-scale study of current methods, report many insightful findings that open up new possibilities for future development.

  • 9 authors
·
Jun 16, 2024

An Auto-Scaling Approach for Serverless Environments Based on a Multi-Expert Consensus Mechanism

Serverless computing provides automatic resource management and pay-per-use execution, but effective autoscaling remains challenging because of dynamic workloads, cold-start latency, and dependencies among functions. We present a dependency-aware autoscaling framework that integrates graph-based bottleneck identification, short-term workload forecasting, multi-model consensus, and cost-aware scaling control. Serverless applications are represented as directed dependency graphs, and structurally important functions are identified using weighted degree centrality. Resource demand is predicted using lightweight MLP, LSTM, and CNN models. Their outputs are combined through a performance-weighted probabilistic ensemble inspired by Bayesian model averaging. The controller further incorporates cold-start awareness and cost comparison to select among scale-up, scale-down, and hold actions. Experiments using real workload traces show that supervised forecasting substantially outperforms unsupervised clustering for autoscaling decision generation. The proposed ensemble achieves 99.88 percent prediction accuracy and reduces prediction error compared with representative hybrid forecasting methods. Evaluations across multiple cloud pricing models also demonstrate consistent infrastructure cost reductions while maintaining performance targets. The results show that combining dependency analysis, multi-expert forecasting, and cost-aware control provides a robust and practical solution for serverless autoscaling.

  • 3 authors
·
Aug 9

Bridging MARL to SARL: An Order-Independent Multi-Agent Transformer via Latent Consensus

Cooperative multi-agent reinforcement learning (MARL) is widely used to address large joint observation and action spaces by decomposing a centralized control problem into multiple interacting agents. However, such decomposition often introduces additional challenges, including non-stationarity, unstable training, weak coordination, and limited theoretical guarantees. In this paper, we propose the Consensus Multi-Agent Transformer (CMAT), a centralized framework that bridges cooperative MARL to a hierarchical single-agent reinforcement learning (SARL) formulation. CMAT treats all agents as a unified entity and employs a Transformer encoder to process the large joint observation space. To handle the extensive joint action space, we introduce a hierarchical decision-making mechanism in which a Transformer decoder autoregressively generates a high-level consensus vector, simulating the process by which agents reach agreement on their strategies in latent space. Conditioned on this consensus, all agents generate their actions simultaneously, enabling order-independent joint decision making and avoiding the sensitivity to action-generation order in conventional Multi-Agent Transformers (MAT). This factorization allows the joint policy to be optimized using single-agent PPO while preserving expressive coordination through the latent consensus. To evaluate the proposed method, we conduct experiments on benchmark tasks from StarCraft II, Multi-Agent MuJoCo, and Google Research Football. The results show that CMAT achieves superior performance over recent centralized solutions, sequential MARL methods, and conventional MARL baselines. The code for this paper is available at:https://github.com/RS2002/CMAT .

  • 3 authors
·
Apr 14

Consensus as Privileged Context for Label-Free Self-Distillation

Sampling multiple solutions and returning the majority answer is among the most reliable ways to improve the reasoning accuracy of large language models without labels, and a growing family of methods converts this consensus signal into training supervision. However, existing approaches use consensus only in restricted forms: as a filter that selects solutions for fine-tuning, as a preference between answers, or as a scalar reward for reinforcement learning, discarding most of the information that the agreeing solutions contain. We present CANON (Consensus-ANchored self-distillatiON), a label-free training method that turns consensus into dense, token-level supervision. For each unlabeled prompt, CANON samples multiple solutions, extracts the majority answer, and conditions a frozen snapshot of the model on a solution that reaches it; this consensus-anchored teacher then supervises the model on its own rollouts at every token. Experiments on mathematical and scientific reasoning benchmarks show that CANON improves pass@1 by up to 12 points, outperforming label-free reinforcement learning by 6 points at a seventh of its compute and approaching a teacher conditioned on gold solutions; trained on pooled unlabeled data, it transfers to held-out benchmarks, matching training methods that use gold labels. Analysis suggests that the improvements are not pure distribution sharpening: after training, the model solves problems it previously never solved in 32 attempts, and its majority vote itself becomes more accurate.

  • 3 authors
·
Jul 14

Transformation Decoupling Strategy based on Screw Theory for Deterministic Point Cloud Registration with Gravity Prior

Point cloud registration is challenging in the presence of heavy outlier correspondences. This paper focuses on addressing the robust correspondence-based registration problem with gravity prior that often arises in practice. The gravity directions are typically obtained by inertial measurement units (IMUs) and can reduce the degree of freedom (DOF) of rotation from 3 to 1. We propose a novel transformation decoupling strategy by leveraging screw theory. This strategy decomposes the original 4-DOF problem into three sub-problems with 1-DOF, 2-DOF, and 1-DOF, respectively, thereby enhancing the computation efficiency. Specifically, the first 1-DOF represents the translation along the rotation axis and we propose an interval stabbing-based method to solve it. The second 2-DOF represents the pole which is an auxiliary variable in screw theory and we utilize a branch-and-bound method to solve it. The last 1-DOF represents the rotation angle and we propose a global voting method for its estimation. The proposed method sequentially solves three consensus maximization sub-problems, leading to efficient and deterministic registration. In particular, it can even handle the correspondence-free registration problem due to its significant robustness. Extensive experiments on both synthetic and real-world datasets demonstrate that our method is more efficient and robust than state-of-the-art methods, even when dealing with outlier rates exceeding 99%.

  • 7 authors
·
Nov 2, 2023

BMGQ: A Bottom-up Method for Generating Complex Multi-hop Reasoning Questions from Semi-structured Data

Building training-ready multi-hop question answering (QA) datasets that truly stress a model's retrieval and reasoning abilities remains highly challenging recently. While there have been a few recent evaluation datasets that capture the characteristics of hard-to-search but easy-to-verify problems -- requiring the integration of ambiguous, indirect, and cross-domain cues -- these data resources remain scarce and are mostly designed for evaluation, making them unsuitable for supervised fine-tuning (SFT) or reinforcement learning (RL). Meanwhile, manually curating non-trivially retrievable questions -- where answers cannot be found through a single direct query but instead require multi-hop reasoning over oblique and loosely connected evidence -- incurs prohibitive human costs and fails to scale, creating a critical data bottleneck for training high-capability retrieval-and-reasoning agents. To address this, we present an automated framework for generating high-difficulty, training-ready multi-hop questions from semi-structured knowledge sources. The system (i) grows diverse, logically labeled evidence clusters through Natural Language Inference (NLI)-based relation typing and diversity-aware expansion; (ii) applies reverse question construction to compose oblique cues so that isolated signals are underinformative but their combination uniquely identifies the target entity; and (iii) enforces quality with a two-step evaluation pipeline that combines multi-model consensus filtering with structured constraint decomposition and evidence-based matching. The result is a scalable process that yields complex, retrieval-resistant yet verifiable questions suitable for SFT/RL training as well as challenging evaluation, substantially reducing human curation effort while preserving the difficulty profile of strong evaluation benchmarks.

  • 9 authors
·
Oct 28, 2025

CP-Guard: Malicious Agent Detection and Defense in Collaborative Bird's Eye View Perception

Collaborative Perception (CP) has shown a promising technique for autonomous driving, where multiple connected and autonomous vehicles (CAVs) share their perception information to enhance the overall perception performance and expand the perception range. However, in CP, ego CAV needs to receive messages from its collaborators, which makes it easy to be attacked by malicious agents. For example, a malicious agent can send harmful information to the ego CAV to mislead it. To address this critical issue, we propose a novel method, CP-Guard, a tailored defense mechanism for CP that can be deployed by each agent to accurately detect and eliminate malicious agents in its collaboration network. Our key idea is to enable CP to reach a consensus rather than a conflict against the ego CAV's perception results. Based on this idea, we first develop a probability-agnostic sample consensus (PASAC) method to effectively sample a subset of the collaborators and verify the consensus without prior probabilities of malicious agents. Furthermore, we define a collaborative consistency loss (CCLoss) to capture the discrepancy between the ego CAV and its collaborators, which is used as a verification criterion for consensus. Finally, we conduct extensive experiments in collaborative bird's eye view (BEV) tasks and our results demonstrate the effectiveness of our CP-Guard. Code is available at https://github.com/CP-Security/CP-Guard

  • 7 authors
·
Dec 16, 2024

Byzantine Resilience at Swarm Scale: A Decentralized Blocklist Protocol from Inter-robot Accusations

The Weighted-Mean Subsequence Reduced (W-MSR) algorithm, the state-of-the-art method for Byzantine-resilient design of decentralized multi-robot systems, is based on discarding outliers received over Linear Consensus Protocol (LCP). Although W-MSR provides well-understood theoretical guarantees relating robust network connectivity to the convergence of the underlying consensus, the method comes with several limitations preventing its use at scale: (1) the number of Byzantine robots, F, to tolerate should be known a priori, (2) the requirement that each robot maintains 2F+1 neighbors is impractical for large F, (3) information propagation is hindered by the requirement that F+1 robots independently make local measurements of the consensus property in order for the swarm's decision to change, and (4) W-MSR is specific to LCP and does not generalize to applications not implemented over LCP. In this work, we propose a Decentralized Blocklist Protocol (DBP) based on inter-robot accusations. Accusations are made on the basis of locally-made observations of misbehavior, and once shared by cooperative robots across the network are used as input to a graph matching algorithm that computes a blocklist. DBP generalizes to applications not implemented via LCP, is adaptive to the number of Byzantine robots, and allows for fast information propagation through the multi-robot system while simultaneously reducing the required network connectivity relative to W-MSR. On LCP-type applications, DBP reduces the worst-case connectivity requirement of W-MSR from (2F+1)-connected to (F+1)-connected and the number of cooperative observers required to propagate new information from F+1 to just 1 observer. We demonstrate empirically that our approach to Byzantine resilience scales to hundreds of robots on cooperative target tracking, time synchronization, and localization case studies.

  • 5 authors
·
Jan 17, 2023

Agentic retrieval-augmented reasoning reshapes collective reliability under model variability in radiology question answering

Agentic retrieval-augmented reasoning pipelines are increasingly used to structure how large language models (LLMs) incorporate external evidence in clinical decision support. These systems iteratively retrieve curated domain knowledge and synthesize it into structured reports before answer selection. Although such pipelines can improve performance, their impact on reliability under model variability remains unclear. In real-world deployment, heterogeneous models may align, diverge, or synchronize errors in ways not captured by accuracy. We evaluated 34 LLMs on 169 expert-curated publicly available radiology questions, comparing zero-shot inference with a radiology-specific multi-step agentic retrieval condition in which all models received identical structured evidence reports derived from curated radiology knowledge. Agentic inference reduced inter-model decision dispersion (median entropy 0.48 vs. 0.13) and increased robustness of correctness across models (mean 0.74 vs. 0.81). Majority consensus also increased overall (P<0.001). Consensus strength and robust correctness remained correlated under both strategies (ho=0.88 for zero-shot; ho=0.87 for agentic), although high agreement did not guarantee correctness. Response verbosity showed no meaningful association with correctness. Among 572 incorrect outputs, 72% were associated with moderate or high clinically assessed severity, although inter-rater agreement was low (appa=0.02). Agentic retrieval therefore was associated with more concentrated decision distributions, stronger consensus, and higher cross-model robustness of correctness. These findings suggest that evaluating agentic systems through accuracy or agreement alone may not always be sufficient, and that complementary analyses of stability, cross-model robustness, and potential clinical impact are needed to characterize reliability under model variability.

  • 12 authors
·
Mar 6

VeriHarness: Scaling Agentic Verification for Long-Horizon Tasks

As LLM agents undertake increasingly complex, long-horizon tasks, verifying their outputs becomes increasingly challenging. We study how verification capability can be strengthened with a fixed base model, without access to reference answers or grading rubrics at test time. Repeated sampling yields multiple rollouts that can contain complementary correct claims, but we need a reliable verification mechanism to determine which claims to trust. We first find that disagreement often exposes correct alternatives, while consensus can conceal errors. These observations motivate VeriHarness, which turns the underlying LLM a generator uses into an agentic verifier by giving it a workspace, evidence tools, and reusable verification skills. A disagreement resolver checks competing claims against environmental evidence, while a consensus challenger tests shared claims and searches for omitted requirements. Their findings guide the selection and revision of the final artifact. Across five long-horizon workspace benchmarks and two frontier models, VeriHarness achieves the highest selection scores among the evaluated baselines. Evidence-backed revision further improves average performance, bringing gains over a single rollout to 6.2 points with Gemini 3.5 Flash and 6.4 points with Claude Opus 4.8. We further show that verification skills can self-improve from failure feedback, demonstrating VeriHarness as a novel and critical approach for scaling long-horizon agentic verification. We release the full pool of approximately 26,000 rollouts across all five benchmarks and both models, produced at a cost of over $100,000, to support future research on agentic verification.

google Google
·
Sep 30 3

Distributed fixed-point algorithms for dynamic convex optimization over decentralized and unbalanced wireless networks

We consider problems where agents in a network seek a common quantity, measured independently and periodically by each agent through a local time-varying process. Numerous solvers addressing such problems have been developed in the past, featuring various adaptations of the local processing and the consensus step. However, existing solvers still lack support for advanced techniques, such as superiorization and over-the-air function computation (OTA-C). To address this limitation, we introduce a comprehensive framework for the analysis of distributed algorithms by characterizing them using the quasi-Fejér type algorithms and an extensive communication model. Under weak assumptions, we prove almost sure convergence of the algorithm to a common estimate for all agents. Moreover, we develop a specific class of algorithms within this framework to tackle distributed optimization problems with time-varying objectives, and, assuming that a time-invariant solution exists, prove its convergence to a solution. We also present a novel OTA-C protocol for consensus step in large decentralized networks, reducing communication overhead and enhancing network autonomy as compared to the existing protocols. The effectiveness of the algorithm, featuring superiorization and OTA-C, is demonstrated in a real-world application of distributed supervised learning over time-varying wireless networks, highlighting its low-latency and energy-efficiency compared to standard approaches.

  • 3 authors
·
Mar 3, 2024

MeSH Term Suggestion for Systematic Review Literature Search

High-quality medical systematic reviews require comprehensive literature searches to ensure the recommendations and outcomes are sufficiently reliable. Indeed, searching for relevant medical literature is a key phase in constructing systematic reviews and often involves domain (medical researchers) and search (information specialists) experts in developing the search queries. Queries in this context are highly complex, based on Boolean logic, include free-text terms and index terms from standardised terminologies (e.g., MeSH), and are difficult and time-consuming to build. The use of MeSH terms, in particular, has been shown to improve the quality of the search results. However, identifying the correct MeSH terms to include in a query is difficult: information experts are often unfamiliar with the MeSH database and unsure about the appropriateness of MeSH terms for a query. Naturally, the full value of the MeSH terminology is often not fully exploited. This paper investigates methods to suggest MeSH terms based on an initial Boolean query that includes only free-text terms. These methods promise to automatically identify highly effective MeSH terms for inclusion in a systematic review query. Our study contributes an empirical evaluation of several MeSH term suggestion methods. We perform an extensive analysis of the retrieval, ranking, and refinement of MeSH term suggestions for each method and how these suggestions impact the effectiveness of Boolean queries.

  • 5 authors
·
Dec 1, 2021

The Cost of Consensus: Isolated Self-Correction Prevails Over Unguided Homogeneous Multi-Agent Debate

Multi-agent debate, where teams of LLMs iteratively exchange rationales and vote on answers, is widely deployed under the assumption that peer review filters hallucinations. Yet the failure dynamics of homogeneous debate remain poorly understood, therefore we report findings from a controlled empirical study of teams of N{=}10 homogeneous agents (Qwen2.5-7B, Llama-3.1-8B, Ministral-3-8B) across R{=}3 debate rounds on two high-difficulty benchmarks (GSM-Hard and MMLU-Hard). We compare peer debate against isolated self-correction and a stochastic noise control that injects rationales from unrelated problems. We decompose debate failure into three model-dependent pathways: sycophantic conformity, where agents uncritically adopt majority answers (modal adoption up to 85.5%); contextual fragility, where peer rationales destabilize previously correct reasoning (vulnerability rate up to 70.0%); and consensus collapse, where plurality voting discards correct answers already present in the generation pool (oracle gap up to 32.3 percentage points). Ablations over communication density (K in {2,4,9}) and sampling temperature (T in {0.4, 0.7}) show that conformity reaches high levels at minimal peer exposure (K{=}2) and intensifies with greater initial diversity. Across all configurations, debate consumes 2.1-3.4times more tokens (up to 28,631 tokens per problem) than self-correction for equal or lower accuracy. Our results indicate that, within the 7-8B parameter class, homogeneous teams without structured roles do not benefit from unguided peer exchange, and that isolated self-correction consistently offers a more favorable cost-accuracy tradeoff.

  • 2 authors
·
Apr 28 1

LLM-Based Scientific Peer Review: Methods, Benchmarks, and Reliability Challenges

The rapid growth of scientific submissions has pushed traditional peer review toward its scalability limits, motivating the exploration of large language models (LLMs) as intelligent automated evaluation assistants. Although recent studies show that LLMs can generate fluent critiques and approximate reviewer scores, their reliability, robustness, and security as decision-support systems remain insufficiently understood. This survey offers a systems-level analysis of LLM-based scientific peer review, focusing on two core evaluative functions: critique generation and score prediction. We present a structured taxonomy of modeling approaches (including prompt-based, supervised, retrieval-augmented, and alignment-optimized approaches), and synthesize empirical findings across existing benchmarks. We analyze dataset constraints, evaluation shortcomings, and domain concentration biases that limit current assessment practices. Beyond performance metrics, we identify emerging robustness risks, including prompt injection, data poisoning, retrieval vulnerabilities, and reward hacking, which expose automated review pipelines to strategic manipulation. From a data mining perspective, we outline key open challenges in modeling subjective disagreement and cross-domain generalization. By reframing automated peer review as a high-stakes, multi-objective decision problem, this survey provides a roadmap for developing robust, transparent, and trustworthy AI-assisted scientific evaluation systems.

  • 2 authors
·
Jun 22

MeSH Suggester: A Library and System for MeSH Term Suggestion for Systematic Review Boolean Query Construction

Boolean query construction is often critical for medical systematic review literature search. To create an effective Boolean query, systematic review researchers typically spend weeks coming up with effective query terms and combinations. One challenge to creating an effective systematic review Boolean query is the selection of effective MeSH Terms to include in the query. In our previous work, we created neural MeSH term suggestion methods and compared them to state-of-the-art MeSH term suggestion methods. We found neural MeSH term suggestion methods to be highly effective. In this demonstration, we build upon our previous work by creating (1) a Web-based MeSH term suggestion prototype system that allows users to obtain suggestions from a number of underlying methods and (2) a Python library that implements ours and others' MeSH term suggestion methods and that is aimed at researchers who want to further investigate, create or deploy such type of methods. We describe the architecture of the web-based system and how to use it for the MeSH term suggestion task. For the Python library, we describe how the library can be used for advancing further research and experimentation, and we validate the results of the methods contained in the library on standard datasets. Our web-based prototype system is available at http://ielab-mesh-suggest.uqcloud.net, while our Python library is at https://github.com/ielab/meshsuggestlib.

  • 3 authors
·
Dec 18, 2022

ReConcile: Round-Table Conference Improves Reasoning via Consensus among Diverse LLMs

Large Language Models (LLMs) still struggle with complex reasoning tasks. Motivated by the society of minds (Minsky, 1988), we propose ReConcile, a multi-model multi-agent framework designed as a round table conference among diverse LLM agents to foster diverse thoughts and discussion for improved consensus. ReConcile enhances the reasoning capabilities of LLMs by holding multiple rounds of discussion, learning to convince other agents to improve their answers, and employing a confidence-weighted voting mechanism. In each round, ReConcile initiates discussion between agents via a 'discussion prompt' that consists of (a) grouped answers and explanations generated by each agent in the previous round, (b) their uncertainties, and (c) demonstrations of answer-rectifying human explanations, used for convincing other agents. This discussion prompt enables each agent to revise their responses in light of insights from other agents. Once a consensus is reached and the discussion ends, ReConcile determines the final answer by leveraging the confidence of each agent in a weighted voting scheme. We implement ReConcile with ChatGPT, Bard, and Claude2 as the three agents. Our experimental results on various benchmarks demonstrate that ReConcile significantly enhances the reasoning performance of the agents (both individually and as a team), surpassing prior single-agent and multi-agent baselines by 7.7% and also outperforming GPT-4 on some of these datasets. We also experiment with GPT-4 itself as one of the agents in ReConcile and demonstrate that its initial performance also improves by absolute 10.0% through discussion and feedback from other agents. Finally, we also analyze the accuracy after every round and observe that ReConcile achieves better and faster consensus between agents, compared to a multi-agent debate baseline. Our code is available at: https://github.com/dinobby/ReConcile

  • 3 authors
·
Sep 22, 2023

WARP: Wasserstein-Aligned RAG for Population Opinions

RAG systems are increasingly used to summarize what large collections of documents say. A user asks "What do people think about X?" and receives an answer that reads as consensus. But standard top-k retrieval ranks documents by query similarity, not by how faithfully they represent the population, so minority views quietly disappear. Existing fixes fall short. Diversity re-rankers like MMR and DPP spread retrieved documents apart, but with no target distribution to aim for. Calibration methods based on KL or JS divergence do target one, yet treat opinion bins as unordered: confusing strong positive with strong negative costs no more than an adjacent-bin miss. We introduce WARP, a family of post-retrieval algorithms that calibrate retrieved evidence to the population's opinion distribution. WARP first recovers underrepresented opinions that cosine ranking may bury, then uses Wasserstein-1 distance to select documents whose sentiment-intensity distribution matches the population target, capturing the ordinal structure ignored by KL and JS divergence. We develop three variants for dense, sparse, and variable candidate pools, trading off calibration quality and speed. Across three review domains spanning 35K documents, 156 queries, and 26 entities, WARP's domain-matched variants reduce distributional error by at least 43% with sub-second latency. These gains carry through to generation: a five-judge LLM panel prefers WARP-generated answers in 86% of decided comparisons at k <= 5.

  • 4 authors
·
Aug 23

Eigen-1: Adaptive Multi-Agent Refinement with Monitor-Based RAG for Scientific Reasoning

Large language models (LLMs) have recently shown strong progress on scientific reasoning, yet two major bottlenecks remain. First, explicit retrieval fragments reasoning, imposing a hidden "tool tax" of extra tokens and steps. Second, multi-agent pipelines often dilute strong solutions by averaging across all candidates. We address these challenges with a unified framework that combines implicit retrieval and structured collaboration. At its foundation, a Monitor-based retrieval module operates at the token level, integrating external knowledge with minimal disruption to reasoning. On top of this substrate, Hierarchical Solution Refinement (HSR) iteratively designates each candidate as an anchor to be repaired by its peers, while Quality-Aware Iterative Reasoning (QAIR) adapts refinement to solution quality. On Humanity's Last Exam (HLE) Bio/Chem Gold, our framework achieves 48.3\% accuracy -- the highest reported to date, surpassing the strongest agent baseline by 13.4 points and leading frontier LLMs by up to 18.1 points, while simultaneously reducing token usage by 53.5\% and agent steps by 43.7\%. Results on SuperGPQA and TRQA confirm robustness across domains. Error analysis shows that reasoning failures and knowledge gaps co-occur in over 85\% of cases, while diversity analysis reveals a clear dichotomy: retrieval tasks benefit from solution variety, whereas reasoning tasks favor consensus. Together, these findings demonstrate how implicit augmentation and structured refinement overcome the inefficiencies of explicit tool use and uniform aggregation. Code is available at: https://github.com/tangxiangru/Eigen-1.

  • 16 authors
·
Sep 25, 2025

A Gold Standard Dataset for the Reviewer Assignment Problem

Many peer-review venues are using algorithms to assign submissions to reviewers. The crux of such automated approaches is the notion of the "similarity score" -- a numerical estimate of the expertise of a reviewer in reviewing a paper -- and many algorithms have been proposed to compute these scores. However, these algorithms have not been subjected to a principled comparison, making it difficult for stakeholders to choose the algorithm in an evidence-based manner. The key challenge in comparing existing algorithms and developing better algorithms is the lack of publicly available gold-standard data. We address this challenge by collecting a novel dataset of similarity scores that we release to the research community. Our dataset consists of 477 self-reported expertise scores provided by 58 researchers who evaluated their expertise in reviewing papers they have read previously. Using our dataset, we compare several widely used similarity algorithms and offer key insights. First, all algorithms exhibit significant error, with misranking rates between 12%-30% in easier cases and 36%-43% in harder ones. Second, most specialized algorithms are designed to work with titles and abstracts of papers, and in this regime the SPECTER2 algorithm performs best. Interestingly, classical TF-IDF matches SPECTER2 in accuracy when given access to full submission texts. In contrast, off-the-shelf LLMs lag behind specialized approaches.

  • 5 authors
·
May 29, 2025

SURE-RAG: Sufficiency and Uncertainty-Aware Evidence Verification for Selective Retrieval-Augmented Generation

Retrieval-augmented generation (RAG) grounds answers in retrieved passages, yet relevance does not guarantee sufficiency: a topical passage may still fail to justify the answer. We study evidence sufficiency verification for selective RAG answering, in which a verifier receives a question, a candidate answer, and retrieved evidence and decides whether the evidence supports, refutes, or is insufficient for the answer, answering only when support is established. We present SURE-RAG, an aggregation protocol that treats evidence sufficiency as a set-level property: missing hops and unresolved conflicts cannot be detected by scoring passages independently. A shared claim-evidence verifier produces a local relation distribution for each (claim, passage) pair, which SURE-RAG aggregates into four interpretable answer-level feature blocks (coverage, relation strength, uncertainty, and retrieval), producing a three-way decision and an auditable selective score. We evaluate on HotpotQA-RAG v3, a controlled multi-hop benchmark, under an artifact-aware protocol (shortcut baselines, counterfactual swaps, no-oracle checks, and GPT-4o audits). Calibrated SURE-RAG attains 0.9075 Macro-F1 (raw 0.8951 +/- 0.0069), well above DeBERTa mean-pooling (0.6516) and a GPT-4o judge (0.7284), and on par with a strong concat cross-encoder (0.8888 +/- 0.0109) while remaining fully auditable. At 30% coverage, risk falls from 0.2588 to 0.1642, a 37% relative reduction. As a boundary-mapping experiment, we contrast SURE-RAG with GPT-4o on HaluBench unsafe detection: the ranking reverses (0.3343 vs. 0.7389 unsafe-F1), indicating that controlled sufficiency verification and natural hallucination detection are distinct problems.

  • 3 authors
·
Jul 23

The Honest Quorum Problem: Epistemic Byzantine Fault Tolerance for Agentic Infrastructure

State machine replication (SMR) and Byzantine fault-tolerant (BFT) consensus guarantee agreement despite a bounded number of arbitrary, colluding faulty participants. However, these guarantees rely on participants outside this set correctly executing the protocol's transition semantics. Agentic validators expose a weaker boundary: an authenticated, responsive, non-equivocating, and protocol-compliant reasoning participant may still endorse a semantically invalid transition due to reasoning errors. We call this failure mode an epistemic fault, and the collective phenomenon the Honest Quorum Problem (where "honest" means protocol-compliant, not semantically correct). Such a quorum can satisfy ordinary checks while forming a certificate for an invalid transition. Thus, agreement alone does not guarantee semantic validity or execution safety. Furthermore, because agentic validators often share model weights, training distributions, prompts, or toolchains, they are highly susceptible to correlated epistemic faults. We define Epistemic Byzantine Fault Tolerance (EBFT), a fault-tolerance model for agentic infrastructure and post-deterministic distributed systems. EBFT augments the conventional Byzantine fault bound with two separate, confidence-indexed quantities: e_δ bounds coherent invalid endorsements outside the Byzantine set, and u_ε bounds unusable validator support that degrades liveness. These quantities characterize semantic safety risk and liveness degradation independently. We derive quorum-threshold conditions for semantic validity, consensus agreement, liveness, and feasible threshold selection, and outline a calibration methodology for estimating these budgets. We show that adding nominally distinct agents improves fault tolerance only when it measurably reduces the upper-tail concentration of invalid endorsements or unusable support.

  • 2 authors
·
Jul 16

Ragnarök: A Reusable RAG Framework and Baselines for TREC 2024 Retrieval-Augmented Generation Track

Did you try out the new Bing Search? Or maybe you fiddled around with Google AI~Overviews? These might sound familiar because the modern-day search stack has recently evolved to include retrieval-augmented generation (RAG) systems. They allow searching and incorporating real-time data into large language models (LLMs) to provide a well-informed, attributed, concise summary in contrast to the traditional search paradigm that relies on displaying a ranked list of documents. Therefore, given these recent advancements, it is crucial to have an arena to build, test, visualize, and systematically evaluate RAG-based search systems. With this in mind, we propose the TREC 2024 RAG Track to foster innovation in evaluating RAG systems. In our work, we lay out the steps we've made towards making this track a reality -- we describe the details of our reusable framework, Ragnar\"ok, explain the curation of the new MS MARCO V2.1 collection choice, release the development topics for the track, and standardize the I/O definitions which assist the end user. Next, using Ragnar\"ok, we identify and provide key industrial baselines such as OpenAI's GPT-4o or Cohere's Command R+. Further, we introduce a web-based user interface for an interactive arena allowing benchmarking pairwise RAG systems by crowdsourcing. We open-source our Ragnar\"ok framework and baselines to achieve a unified standard for future RAG systems.

  • 8 authors
·
Jun 24, 2024

GroupRank: A Groupwise Reranking Paradigm Driven by Reinforcement Learning

Large Language Models have shown strong potential as rerankers to enhance the overall performance of RAG systems. However, existing reranking paradigms are constrained by a core theoretical and practical dilemma: Pointwise methods, while simple and highly flexible, evaluate documents independently, making them prone to the Ranking Myopia Trap, overlooking the relative importance between documents. In contrast, Listwise methods can perceive the global ranking context, but suffer from inherent List Rigidity, leading to severe scalability and flexibility issues when handling large candidate sets. To address these challenges, we propose Groupwise, a novel reranking paradigm. In this approach, the query and a group of candidate documents are jointly fed into the model, which performs within-group comparisons to assign individual relevance scores to each document. This design retains the flexibility of Pointwise methods while enabling the comparative capability of Listwise methods. We further adopt GRPO for model training, equipped with a heterogeneous reward function that integrates ranking metrics with a distributional reward aimed at aligning score distributions across groups. To overcome the bottleneck caused by the scarcity of high quality labeled data, we further propose an innovative pipeline for synthesizing high quality retrieval and ranking data. The resulting data can be leveraged not only for training the reranker but also for training the retriever. Extensive experiments validate the effectiveness of our approach. On two reasoning intensive retrieval benchmarks, BRIGHT and R2MED.

AQ-MedAI AQ
·
Nov 10, 2025 7

Flag Aggregator: Scalable Distributed Training under Failures and Augmented Losses using Convex Optimization

Modern ML applications increasingly rely on complex deep learning models and large datasets. There has been an exponential growth in the amount of computation needed to train the largest models. Therefore, to scale computation and data, these models are inevitably trained in a distributed manner in clusters of nodes, and their updates are aggregated before being applied to the model. However, a distributed setup is prone to Byzantine failures of individual nodes, components, and software. With data augmentation added to these settings, there is a critical need for robust and efficient aggregation systems. We define the quality of workers as reconstruction ratios in (0,1], and formulate aggregation as a Maximum Likelihood Estimation procedure using Beta densities. We show that the Regularized form of log-likelihood wrt subspace can be approximately solved using iterative least squares solver, and provide convergence guarantees using recent Convex Optimization landscape results. Our empirical findings demonstrate that our approach significantly enhances the robustness of state-of-the-art Byzantine resilient aggregators. We evaluate our method in a distributed setup with a parameter server, and show simultaneous improvements in communication efficiency and accuracy across various tasks. The code is publicly available at https://github.com/hamidralmasi/FlagAggregator

  • 4 authors
·
Feb 12, 2023

VecCISC: Improving Confidence-Informed Self-Consistency with Reasoning Trace Clustering and Candidate Answer Selection

A standard technique for scaling inference-time reasoning is Self-Consistency, whereby multiple candidate answers are sampled from an LLM and the most common answer is selected. More recently, it has been shown that weighted majority voting (e.g. Confidence-Informed Self Consistency (CISC)), which assigns a confidence value to each candidate answer and chooses the answer with the largest accumulated score, tends to be more accurate on a wide range of popular benchmarks. In practice, weighted majority voting necessitates calling a critic LLM on each candidate's reasoning trace to produce the answer's confidence score. This secondary series of LLM calls greatly increases the overhead and cost of weighted majority voting, despite its potential performance benefits. To reduce this expense, we propose VecCISC, a lightweight, adaptive framework that uses a measure of semantic similarity to filter reasoning traces that are semantically equivalent to others, degenerate, or hallucinated, thus decreasing the number of candidate answers that must be evaluated by the critic. To ensure adequate experimental thoroughness, we evaluate VecCISC on five challenging, widely-adopted datasets spanning the domains of mathematics, chemistry, biology, commonsense reasoning, and the humanities. Our results demonstrate that VecCISC reduces the total token usage by 47%, while maintaining or exceeding the accuracy of CISC.

  • 4 authors
·
May 7

Generative Artificial Intelligence Consensus in a Trustless Network

We performed a billion locality sensitive hash comparisons between artificially generated data samples to answer the critical question - can we verify the "correctness" of generative AI output in a non-deterministic, trustless, decentralized network? We generate millions of data samples from a variety of open source diffusion and large language models and describe the procedures and trade-offs between generating more verses less deterministic output in a heterogenous, stochastic network. Further, we analyze the outputs to provide empirical evidence of different parameterizations of tolerance and error bounds for verification. Finally, given that we have the generated an enormous amount of simulated data, we also release a new training dataset called ImageNet-Gen for use in augmenting existing training pipelines. For our results, we show that with a majority vote between three independent verifiers, we can detect image generated perceptual collisions in generated AI with over 99.89% probability and less than 0.0267% chance of intra-class collision. For large language models (LLMs), we are able to gain 100% consensus using greedy methods or n-way beam searches to generate consensus demonstrated on different LLMs. In the context of generative AI training, we pinpoint and minimize the major sources of stochasticity and present gossip and synchronization training techniques for verifiability. Thus, this work provides a practical, solid foundation for AI verification and consensus for the minimization of trust in a decentralized network.

  • 4 authors
·
Jul 4, 2023

OPTAGENT: Optimizing Multi-Agent LLM Interactions Through Verbal Reinforcement Learning for Enhanced Reasoning

Large Language Models (LLMs) have shown remarkable reasoning capabilities in mathematical and scientific tasks. To enhance complex reasoning, multi-agent systems have been proposed to harness the collective intelligence of LLM agents. However, existing collaboration structures are either predefined or rely on majority voting or round-table debates, which can suppress correct but less dominant agent contributions. Recent approaches model multi-agent systems as graph networks but optimize purely for agent performance, neglecting the quality of interactions. We hypothesize that effective agent communication is crucial for multi-agent reasoning and that debating quality plays a significant role. To address this, we propose ours, a multi-agent verbal reinforcement learning algorithm that dynamically constructs and refines multi-agent collaboration structures. Our method defines action spaces and a feedback mechanism that evaluates communication robustness and coherence throughout the debate. The final decision is achieved through a majority vote over all the agents. We assess ours on various reasoning tasks, including mathematical reasoning, creative writing, scientific reasoning, and numerical sorting. Results demonstrate that our approach significantly outperforms single-agent prompting methods and state-of-the-art multi-agent frameworks on diverse tasks.

  • 7 authors
·
Oct 20, 2025

MAIN-RAG: Multi-Agent Filtering Retrieval-Augmented Generation

Large Language Models (LLMs) are becoming essential tools for various natural language processing tasks but often suffer from generating outdated or incorrect information. Retrieval-Augmented Generation (RAG) addresses this issue by incorporating external, real-time information retrieval to ground LLM responses. However, the existing RAG systems frequently struggle with the quality of retrieval documents, as irrelevant or noisy documents degrade performance, increase computational overhead, and undermine response reliability. To tackle this problem, we propose Multi-Agent Filtering Retrieval-Augmented Generation (MAIN-RAG), a training-free RAG framework that leverages multiple LLM agents to collaboratively filter and score retrieved documents. Specifically, MAIN-RAG introduces an adaptive filtering mechanism that dynamically adjusts the relevance filtering threshold based on score distributions, effectively minimizing noise while maintaining high recall of relevant documents. The proposed approach leverages inter-agent consensus to ensure robust document selection without requiring additional training data or fine-tuning. Experimental results across four QA benchmarks demonstrate that MAIN-RAG consistently outperforms traditional RAG approaches, achieving a 2-11% improvement in answer accuracy while reducing the number of irrelevant retrieved documents. Quantitative analysis further reveals that our approach achieves superior response consistency and answer accuracy over baseline methods, offering a competitive and practical alternative to training-based solutions.

  • 11 authors
·
Dec 31, 2024

VitaLITy: Promoting Serendipitous Discovery of Academic Literature with Transformers & Visual Analytics

There are a few prominent practices for conducting reviews of academic literature, including searching for specific keywords on Google Scholar or checking citations from some initial seed paper(s). These approaches serve a critical purpose for academic literature reviews, yet there remain challenges in identifying relevant literature when similar work may utilize different terminology (e.g., mixed-initiative visual analytics papers may not use the same terminology as papers on model-steering, yet the two topics are relevant to one another). In this paper, we introduce a system, VitaLITy, intended to complement existing practices. In particular, VitaLITy promotes serendipitous discovery of relevant literature using transformer language models, allowing users to find semantically similar papers in a word embedding space given (1) a list of input paper(s) or (2) a working abstract. VitaLITy visualizes this document-level embedding space in an interactive 2-D scatterplot using dimension reduction. VitaLITy also summarizes meta information about the document corpus or search query, including keywords and co-authors, and allows users to save and export papers for use in a literature review. We present qualitative findings from an evaluation of VitaLITy, suggesting it can be a promising complementary technique for conducting academic literature reviews. Furthermore, we contribute data from 38 popular data visualization publication venues in VitaLITy, and we provide scrapers for the open-source community to continue to grow the list of supported venues.

  • 4 authors
·
Aug 7, 2021

Benchmarking Large Language Models for Knowledge Graph Validation

Knowledge Graphs (KGs) store structured factual knowledge by linking entities through relationships, crucial for many applications. These applications depend on the KG's factual accuracy, so verifying facts is essential, yet challenging. Expert manual verification is ideal but impractical on a large scale. Automated methods show promise but are not ready for real-world KGs. Large Language Models (LLMs) offer potential with their semantic understanding and knowledge access, yet their suitability and effectiveness for KG fact validation remain largely unexplored. In this paper, we introduce FactCheck, a benchmark designed to evaluate LLMs for KG fact validation across three key dimensions: (1) LLMs internal knowledge; (2) external evidence via Retrieval-Augmented Generation (RAG); and (3) aggregated knowledge employing a multi-model consensus strategy. We evaluated open-source and commercial LLMs on three diverse real-world KGs. FactCheck also includes a RAG dataset with 2+ million documents tailored for KG fact validation. Additionally, we offer an interactive exploration platform for analyzing verification decisions. The experimental analyses demonstrate that while LLMs yield promising results, they are still not sufficiently stable and reliable to be used in real-world KG validation scenarios. Integrating external evidence through RAG methods yields fluctuating performance, providing inconsistent improvements over more streamlined approaches -- at higher computational costs. Similarly, strategies based on multi-model consensus do not consistently outperform individual models, underscoring the lack of a one-fits-all solution. These findings further emphasize the need for a benchmark like FactCheck to systematically evaluate and drive progress on this difficult yet crucial task.

FactCheck-AI Fact Check
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Feb 11 2

What are the best systems? New perspectives on NLP Benchmarking

In Machine Learning, a benchmark refers to an ensemble of datasets associated with one or multiple metrics together with a way to aggregate different systems performances. They are instrumental in (i) assessing the progress of new methods along different axes and (ii) selecting the best systems for practical use. This is particularly the case for NLP with the development of large pre-trained models (e.g. GPT, BERT) that are expected to generalize well on a variety of tasks. While the community mainly focused on developing new datasets and metrics, there has been little interest in the aggregation procedure, which is often reduced to a simple average over various performance measures. However, this procedure can be problematic when the metrics are on a different scale, which may lead to spurious conclusions. This paper proposes a new procedure to rank systems based on their performance across different tasks. Motivated by the social choice theory, the final system ordering is obtained through aggregating the rankings induced by each task and is theoretically grounded. We conduct extensive numerical experiments (on over 270k scores) to assess the soundness of our approach both on synthetic and real scores (e.g. GLUE, EXTREM, SEVAL, TAC, FLICKR). In particular, we show that our method yields different conclusions on state-of-the-art systems than the mean-aggregation procedure while being both more reliable and robust.

  • 4 authors
·
Feb 8, 2022

CCS: Clinical Consensus Selection for Radiology Report Generation

Radiology report generation (RRG) is commonly formulated as a single-path generation task, where a multimodal large language model (MLLM) produces one decoded report as the final output. While recent progress has largely been driven by scaling training data, model capacity, and retrieval mechanisms, improving report quality at inference time remains underexplored. In this work, we observe that fixed radiology MLLMs often generate clinically stronger reports elsewhere in their candidate pool than the one selected by default decoding, suggesting that inference-time decision making remains an overlooked bottleneck. To address this, we propose Clinical Consensus Selection (CCS), a decoder-agnostic inference-time selection framework that samples multiple candidate reports and selects the one with the highest clinical consensus across the rollout pool. CCS unifies text-based utilities with a radiology-adapted utility computed by an image--report-trained multimodal embedder, which measures candidate agreement beyond surface-level textual similarity. Across three datasets and multiple radiology MLLMs, CCS consistently improves inference-time performance over single-path decoding and generic Best-of-N baselines, with particularly clear gains on clinical metrics. Further analysis shows that image-grounded utility forms a selection axis distinct from textual consensus and that substantial headroom remains for improving RRG at inference time.

  • 5 authors
·
May 27

FinResearchBench II: A Deep Research Benchmark with Consensus-Derived Gold Rubrics for Distinguishing Financial Report Quality

Deep research agents are increasingly used to produce long-form financial reports, yet large-scale evaluation remains bottlenecked by the need for human experts to define and execute high-quality rubrics. We address this problem by proposing a scalable pipeline for generating high-quality rubrics without human experts in the final loop. We build a financial deep research benchmark from 104 real-world user queries and automatically synthesize 14,450 query-specific candidate rubrics from model-generated reports. To justify removing human experts from rubric execution, we compare rubric judgments from three human experts with those from a three-LLM judge panel on a sampled subset, and show that LLM-based evaluation is sufficiently consistent with human evaluation to replace it for large-scale rubric screening, including 98.67\% label-level agreement on jointly unanimous items. We then derive consensus-derived gold rubrics through two filters: a strict consistency filter, which keeps a rubric only if the three LLM judges unanimously agree on every report under the same query, and a distinguishability filter, which keeps a rubric only if it assigns at least one majority-yes and at least one majority-no label across the evaluated systems. This process retains 3,687 consistency-passed rubrics, of which 2,600 remain distinguishable and form the final set of consensus-derived gold rubrics. Using this final rubric set, we obtain clearly differentiated rankings across 10 deep research systems, with item-level pass rates ranging from 58.58\% to 22.23\%. More broadly, because the pipeline removes human-expert execution from rubric generation and evaluation, it is naturally scalable for benchmark evaluation, automatic system comparison, and future studies of evaluation-driven system improvement.

  • 8 authors
·
Jul 14

The Lessons of Developing Process Reward Models in Mathematical Reasoning

Process Reward Models (PRMs) emerge as a promising approach for process supervision in mathematical reasoning of Large Language Models (LLMs), which aim to identify and mitigate intermediate errors in the reasoning processes. However, the development of effective PRMs faces significant challenges, particularly in data annotation and evaluation methodologies. In this paper, through extensive experiments, we demonstrate that commonly used Monte Carlo (MC) estimation-based data synthesis for PRMs typically yields inferior performance and generalization compared to LLM-as-a-judge and human annotation methods. MC estimation relies on completion models to evaluate current-step correctness, leading to inaccurate step verification. Furthermore, we identify potential biases in conventional Best-of-N (BoN) evaluation strategies for PRMs: (1) The unreliable policy models generate responses with correct answers but flawed processes, leading to a misalignment between the evaluation criteria of BoN and the PRM objectives of process verification. (2) The tolerance of PRMs of such responses leads to inflated BoN scores. (3) Existing PRMs have a significant proportion of minimum scores concentrated on the final answer steps, revealing the shift from process to outcome-based assessment in BoN Optimized PRMs. To address these challenges, we develop a consensus filtering mechanism that effectively integrates MC estimation with LLM-as-a-judge and advocates a more comprehensive evaluation framework that combines response-level and step-level metrics. Based on the mechanisms, we significantly improve both model performance and data efficiency in the BoN evaluation and the step-wise error identification task. Finally, we release a new state-of-the-art PRM that outperforms existing open-source alternatives and provides practical guidelines for future research in building process supervision models.

  • 9 authors
·
Jan 13, 2025 8

Semi-Supervised Learning for Multi-Task Scene Understanding by Neural Graph Consensus

We address the challenging problem of semi-supervised learning in the context of multiple visual interpretations of the world by finding consensus in a graph of neural networks. Each graph node is a scene interpretation layer, while each edge is a deep net that transforms one layer at one node into another from a different node. During the supervised phase edge networks are trained independently. During the next unsupervised stage edge nets are trained on the pseudo-ground truth provided by consensus among multiple paths that reach the nets' start and end nodes. These paths act as ensemble teachers for any given edge and strong consensus is used for high-confidence supervisory signal. The unsupervised learning process is repeated over several generations, in which each edge becomes a "student" and also part of different ensemble "teachers" for training other students. By optimizing such consensus between different paths, the graph reaches consistency and robustness over multiple interpretations and generations, in the face of unknown labels. We give theoretical justifications of the proposed idea and validate it on a large dataset. We show how prediction of different representations such as depth, semantic segmentation, surface normals and pose from RGB input could be effectively learned through self-supervised consensus in our graph. We also compare to state-of-the-art methods for multi-task and semi-supervised learning and show superior performance.

  • 6 authors
·
Oct 2, 2020 1

Evaluating Machine Learning Models with NERO: Non-Equivariance Revealed on Orbits

Proper evaluations are crucial for better understanding, troubleshooting, interpreting model behaviors and further improving model performance. While using scalar-based error metrics provides a fast way to overview model performance, they are often too abstract to display certain weak spots and lack information regarding important model properties, such as robustness. This not only hinders machine learning models from being more interpretable and gaining trust, but also can be misleading to both model developers and users. Additionally, conventional evaluation procedures often leave researchers unclear about where and how model fails, which complicates model comparisons and further developments. To address these issues, we propose a novel evaluation workflow, named Non-Equivariance Revealed on Orbits (NERO) Evaluation. The goal of NERO evaluation is to turn focus from traditional scalar-based metrics onto evaluating and visualizing models equivariance, closely capturing model robustness, as well as to allow researchers quickly investigating interesting or unexpected model behaviors. NERO evaluation is consist of a task-agnostic interactive interface and a set of visualizations, called NERO plots, which reveals the equivariance property of the model. Case studies on how NERO evaluation can be applied to multiple research areas, including 2D digit recognition, object detection, particle image velocimetry (PIV), and 3D point cloud classification, demonstrate that NERO evaluation can quickly illustrate different model equivariance, and effectively explain model behaviors through interactive visualizations of the model outputs. In addition, we propose consensus, an alternative to ground truths, to be used in NERO evaluation so that model equivariance can still be evaluated with new, unlabeled datasets.

  • 5 authors
·
May 31, 2023

Generation-Time vs. Post-hoc Citation: A Holistic Evaluation of LLM Attribution

Trustworthy Large Language Models (LLMs) must cite human-verifiable sources in high-stakes domains such as healthcare, law, academia, and finance, where even small errors can have severe consequences. Practitioners and researchers face a choice: let models generate citations during decoding, or let models draft answers first and then attach appropriate citations. To clarify this choice, we introduce two paradigms: Generation-Time Citation (G-Cite), which produces the answer and citations in one pass, and Post-hoc Citation (P-Cite), which adds or verifies citations after drafting. We conduct a comprehensive evaluation from zero-shot to advanced retrieval-augmented methods across four popular attribution datasets and provide evidence-based recommendations that weigh trade-offs across use cases. Our results show a consistent trade-off between coverage and citation correctness, with retrieval as the main driver of attribution quality in both paradigms. P-Cite methods achieve high coverage with competitive correctness and moderate latency, whereas G-Cite methods prioritize precision at the cost of coverage and speed. We recommend a retrieval-centric, P-Cite-first approach for high-stakes applications, reserving G-Cite for precision-critical settings such as strict claim verification. Our codes and human evaluation results are available at https://anonymous.4open.science/r/Citation_Paradigms-BBB5/

  • 4 authors
·
Sep 25, 2025

A Dataset for the Validation of Truth Inference Algorithms Suitable for Online Deployment

For the purpose of efficient and cost-effective large-scale data labeling, crowdsourcing is increasingly being utilized. To guarantee the quality of data labeling, multiple annotations need to be collected for each data sample, and truth inference algorithms have been developed to accurately infer the true labels. Despite previous studies having released public datasets to evaluate the efficacy of truth inference algorithms, these have typically focused on a single type of crowdsourcing task and neglected the temporal information associated with workers' annotation activities. These limitations significantly restrict the practical applicability of these algorithms, particularly in the context of long-term and online truth inference. In this paper, we introduce a substantial crowdsourcing annotation dataset collected from a real-world crowdsourcing platform. This dataset comprises approximately two thousand workers, one million tasks, and six million annotations. The data was gathered over a period of approximately six months from various types of tasks, and the timestamps of each annotation were preserved. We analyze the characteristics of the dataset from multiple perspectives and evaluate the effectiveness of several representative truth inference algorithms on this dataset. We anticipate that this dataset will stimulate future research on tracking workers' abilities over time in relation to different types of tasks, as well as enhancing online truth inference.

  • 12 authors
·
Mar 10, 2024

Excision Score: Evaluating Edits with Surgical Precision

Many tasks revolve around editing a document, whether code or text. We formulate the revision similarity problem to unify a wide range of machine learning evaluation problems whose goal is to assess a revision to an existing document. We observe that revisions usually change only a small portion of an existing document, so the existing document and its immediate revisions share a majority of their content. We formulate five adequacy criteria for revision similarity measures, designed to align them with human judgement. We show that popular pairwise measures, like BLEU, fail to meet these criteria, because their scores are dominated by the shared content. They report high similarity between two revisions when humans would assess them as quite different. This is a fundamental flaw we address. We propose a novel static measure, Excision Score (ES), which computes longest common subsequence (LCS) to remove content shared by an existing document with the ground truth and predicted revisions, before comparing only the remaining divergent regions. This is analogous to a surgeon creating a sterile field to focus on the work area. We use approximation to speed the standard cubic LCS computation to quadratic. In code-editing evaluation, where static measures are often used as a cheap proxy for passing tests, we demonstrate that ES surpasses existing measures. When aligned with test execution on HumanEvalFix, ES improves over its nearest competitor, SARI, by 12% Pearson correlation and by >21% over standard measures like BLEU. The key criterion is invariance to shared context; when we perturb HumanEvalFix with increased shared context, ES' improvement over SARI increases to 20% and >30% over standard measures. ES also handles other corner cases that other measures do not, such as correctly aligning moved code blocks, and appropriately rewarding matching insertions or deletions.

  • 4 authors
·
Oct 24, 2025

Deep Research, Shallow Evaluation: A Case Study in Meta-Evaluation for Long-Form QA Benchmarks

Recent advances have made long-form report-generating systems widely available. This has prompted evaluation frameworks that use LLM-as-judge protocols and claim verification, along with meta-evaluation frameworks that seek to validate these methods. Many of the meta-evaluations estimate an evaluation quality's by comparing its assessments against human pairwise preferences. Prior work, however, suggests that human pairwise preference may be overly simplistic and can fail to capture nuances of expert expectations. We conduct a case study in meta-evaluation for long-form QA benchmarks using ScholarQA-CS2, a benchmark designed for assessing retrieval-augmented deep-research QA in the scientific domain. We comprehensively validate the benchmark through human pairwise preference judgments, then critically examine the strengths, weaknesses, and confounders of this approach. We show that pairwise preference rankings are best suited for system-level evaluation, while explicit metric-wise annotations and expert annotators are critical for reliable metric-level assessment, with subjectivity remaining a key challenge. Based on our findings, we offer practical guidelines for designing future meta-evaluations that better align evaluation methods, annotator expertise, and reporting practices. By surfacing these methodological challenges, we aim to advance evaluation standards for deep-research systems.

  • 12 authors
·
Mar 5

Intern-Atlas: A Methodological Evolution Graph as Research Infrastructure for AI Scientists

Existing research infrastructure is fundamentally document-centric, providing citation links between papers but lacking explicit representations of methodological evolution. In particular, it does not capture the structured relationships that explain how and why research methods emerge, adapt, and build upon one another. With the rise of AI-driven research agents as a new class of consumers of scientific knowledge, this limitation becomes increasingly consequential, as such agents cannot reliably reconstruct method evolution topologies from unstructured text. We introduce Intern-Atlas, a methodological evolution graph that automatically identifies method-level entities, infers lineage relationships among methodologies, and captures the bottlenecks that drive transitions between successive innovations. Built from 1,030,314 papers spanning AI conferences, journals, and arXiv preprints, the resulting graph comprises 9,410,201 semantically typed edges, each grounded in verbatim source evidence, forming a queryable causal network of methodological development. To operationalize this structure, we further propose a self-guided temporal tree search algorithm for constructing evolution chains that trace the progression of methods over time. We evaluate the quality of the resulting graph against expert-curated ground-truth evolution chains and observe strong alignment. In addition, we demonstrate that Intern-Atlas enables downstream applications in idea evaluation and automated idea generation. We position methodological evolution graphs as a foundational data layer for the emerging automated scientific discovery.

  • 13 authors
·
Apr 29 4

IdeaAMBIG: Benchmarking Implementation-Critical Gaps in Research-Idea Specifications

A research idea may be novel, coherent, and scientifically plausible, yet its proposed method may remain insufficiently specified for faithful implementation. We study the codification readiness of implementation-facing research-method specifications, defined by whether they provide sufficient methodological information for a competent implementer or coding agent to construct the intended method without unsupported assumptions. We construct evidence-grounded specifications and their supported resolutions from papers, codebases, issue threads, and reproduction artifacts. We introduce IdeaAMBIG, a benchmark of 660 evidence-grounded instances: 163 real-world gaps from reproducibility reports and GitHub issues, and 497 controlled synthetic gaps injected into codification-ready references. IdeaAMBIG evaluates three capabilities: codification-readiness assessment, defect localization, and clarification action generation. Defect localization receives only the specification, whereas clarification additionally receives the annotated defect. Across 13 LLMs, the best model achieves 9.6% Macro Defect Recovery Rate on real-world instances but 80.6% Macro Clarification Action Success Rate when given the defect. In an oracle study, supplying the gold resolution raises the downstream codification-ready rate from 14% to 98%. Across all evaluated models, defect localization is the main bottleneck, with stronger clarification given the defect.

An Automated Pipeline for Character and Relationship Extraction from Readers' Literary Book Reviews on Goodreads.com

Reader reviews of literary fiction on social media, especially those in persistent, dedicated forums, create and are in turn driven by underlying narrative frameworks. In their comments about a novel, readers generally include only a subset of characters and their relationships, thus offering a limited perspective on that work. Yet in aggregate, these reviews capture an underlying narrative framework comprised of different actants (people, places, things), their roles, and interactions that we label the "consensus narrative framework". We represent this framework in the form of an actant-relationship story graph. Extracting this graph is a challenging computational problem, which we pose as a latent graphical model estimation problem. Posts and reviews are viewed as samples of sub graphs/networks of the hidden narrative framework. Inspired by the qualitative narrative theory of Greimas, we formulate a graphical generative Machine Learning (ML) model where nodes represent actants, and multi-edges and self-loops among nodes capture context-specific relationships. We develop a pipeline of interlocking automated methods to extract key actants and their relationships, and apply it to thousands of reviews and comments posted on Goodreads.com. We manually derive the ground truth narrative framework from SparkNotes, and then use word embedding tools to compare relationships in ground truth networks with our extracted networks. We find that our automated methodology generates highly accurate consensus narrative frameworks: for our four target novels, with approximately 2900 reviews per novel, we report average coverage/recall of important relationships of > 80% and an average edge detection rate of >89\%. These extracted narrative frameworks can generate insight into how people (or classes of people) read and how they recount what they have read to others.

  • 8 authors
·
Apr 20, 2020

A Methodology for Evaluating RAG Systems: A Case Study On Configuration Dependency Validation

Retrieval-augmented generation (RAG) is an umbrella of different components, design decisions, and domain-specific adaptations to enhance the capabilities of large language models and counter their limitations regarding hallucination and outdated and missing knowledge. Since it is unclear which design decisions lead to a satisfactory performance, developing RAG systems is often experimental and needs to follow a systematic and sound methodology to gain sound and reliable results. However, there is currently no generally accepted methodology for RAG evaluation despite a growing interest in this technology. In this paper, we propose a first blueprint of a methodology for a sound and reliable evaluation of RAG systems and demonstrate its applicability on a real-world software engineering research task: the validation of configuration dependencies across software technologies. In summary, we make two novel contributions: (i) A novel, reusable methodological design for evaluating RAG systems, including a demonstration that represents a guideline, and (ii) a RAG system, which has been developed following this methodology, that achieves the highest accuracy in the field of dependency validation. For the blueprint's demonstration, the key insights are the crucial role of choosing appropriate baselines and metrics, the necessity for systematic RAG refinements derived from qualitative failure analysis, as well as the reporting practices of key design decision to foster replication and evaluation.

  • 4 authors
·
Oct 11, 2024