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Nov 6

Neural State Prediction: Obstructing Shortcut Learning in EEG Foundation Models

EEG foundation models increasingly use masked prediction to learn from unlabeled recordings, but optimizing this objective does not ensure transferable neural representations. A central challenge is that stable positional cues and local correlations can make masked regions predictable without integrating distributed neural context. To reduce this reliance on low-information prediction paths, we introduce Neural State Prediction (NSP), a latent-predictive framework that constrains both the prediction target and the available context. NSP uses a Target Encoder updated by an exponential moving average (EMA) to define latent supervision. Identity residualization removes additive effects associated with channel identity and relative time from the targets, while topology-separated context excludes their immediate spatial and temporal neighborhood from the visible input. We pretrain NSP on 2.2 million EEG segments from TUEG and evaluate it across 30 downstream datasets spanning clinical diagnosis, sleep staging, emotion recognition, motor imagery, event-related potentials, cognitive-state decoding, and language retrieval. Under full-parameter multi-task fine-tuning on EEG-FM-Bench, NSP achieves 63.94 macro balanced accuracy across 14 datasets, exceeding the strongest evaluated baseline by 2.35 percentage points. Controlled component ablations assess the contribution of each mechanism, while matched context controls and held-out interventions characterize the role of context geometry, signal content, and positional information. Jointly designing latent targets and their context offers a promising direction for EEG foundation models that learn from distributed signal structure.

  • 5 authors
·
Sep 25

Counterfactual Predictions in Scientific Emulators Without Controlled Experiments

Many scientific questions require reasoning about what was never observed: What if the conditions, interventions, or history had been different? Models can predict accurately on observed data yet fail on such what-if queries when correlated inputs are varied independently. A common remedy is to add controlled simulation data in which these factors are explicitly disentangled, but this requires access to a simulator, can be computationally expensive, and inherits the simulator's modeling assumptions. We introduce ReRoute, a framework for targeted scientific what-if prediction that combines factual data with partial mechanistic knowledge, without requiring controlled intervention data for adaptation. ReRoute fixes the queried input of a pretrained backbone to a reference value, reintroduces its variation through a known mechanistic pathway, and fine-tunes on the original factual data, while leaving downstream effects to the learned dynamics. We provide a causal identification result for this construction under explicit structural assumptions, with the core argument machine-checked in Lean. After showing that ReRoute achieves highly accurate counterfactual predictions in a controlled advection-diffusion system where exact responses are available, we turn to state-of-the-art climate emulation. On held-out coupled-climate interventions, ReRoute reduces aggregate climate error by 18.2-31.8% under severe CO_2 distribution shifts while preserving skill under standard conditions, at a small fraction of the cost of retraining on additional controlled simulations, without even accounting for the substantial expense of generating such data. Finally, on an emulator trained from historical ERA5 reanalysis, where no counterfactual reference exists, ReRoute preserves substantially more of the surface warming implied by the observed boundary conditions under a fixed-CO_2 counterfactual.

  • 6 authors
·
Sep 29

Discover, Falsify, Revise: Auditing Input-Use Claims from Source Code to Predictive Contribution in Agent-Discovered Cell Models

AI virtual cells aim to predict cellular responses to specified interventions, yet held-out predictive performance alone does not establish use of the supplied perturbation information. This prediction-claim gap matters in agentic model discovery, where language-model agents generate and revise predictors using score-based feedback. We introduce CELLAUDIT, which audits input-use claims by asking whether an input can enter the cited computation, whether fitted predictions depend on it, and whether that dependence improves prediction of observed response. On a paired morphology-transcriptomics perturbation benchmark (BBBC047), an agent-selected predictor attains a mean held-out Global Pearson correlation coefficient (PCC) of 0.3153 but remains invariant to compound replacement; a control-profile-only predictor reaches 0.3142. Source inspection identifies a compound-query pathway blocked by singleton key-value attention, and the invariance persists after refitting with disjoint control wells. In a stratified audit of 48 candidates across two linked tasks, 47 change predictions under compound replacement on both held-out folds, but only 20 show target-loss gains with intervals above zero on both folds. On BBBC047, falsification-guided revisions recover positive mean compound contributions while retaining gains over the control-profile-only baseline. In matched sci-Plex searches, audit-enriched feedback yields higher held-out performance and larger mean compound and dose contributions across five trajectories, although paired intervals span zero. Refitting fixed designs on an independently acquired cohort shows predictive generalization need not imply generalization of input-use claims: dose contribution persists, whereas support for compound identity does not. CELLAUDIT adds a falsification layer to agentic model discovery, moving from generate-score-revise toward discover-falsify-revise.

  • 6 authors
·
Sep 22

Cracking Mobile Manipulation: From Failure Diagnosis to Agentic Robot System

Recent vision-language-action (VLA) models have shown strong performance on local robot manipulation, yet their success does not readily translate to long-horizon mobile manipulation. In our experiments, a pretrained subtask VLA achieves 80% success rate on atomic manipulation tasks but only 19% when these skills are composed into mobile manipulation. We argue that this gap stems from failures across the execution process rather than from local manipulation capability alone. To uncover these bottlenecks, we systematically diagnose failures in long-horizon mobile manipulation and identify three dominant regimes: task planning, navigation and base positioning, and local manipulation. Based on this diagnosis, we develop failure-guided agentic intervention that augments a fixed subtask VLA with demonstration-based planning guidance, adaptive visual memory, accessibility-aware base adjustment, and local end-effector adjustment. On RoboCasa365, these interventions progressively improve task success from 19% to 47%, with the finalized system reaching 49% on held-out episode seeds, compared with 18% for the baseline. The same design improves performance from 14% to 37% on BEHAVIOR-1K and from 5/20 to 13/20 on real-robot tasks. These results suggest that reliable mobile manipulation can be advanced by diagnosing and intervening on the current bottleneck, rather than uniformly scaling the underlying policy. Our code will be released at https://github.com/PKU-VaLuE-Lab/Cracking-Mobile-Manipulation.git.

  • 8 authors
·
Oct 13

Layer-Targeted Multilingual Knowledge Erasure in Large Language Models

Recent work has demonstrated that machine unlearning in Large Language Models (LLMs) fails to generalize across languages: knowledge erased in one language frequently remains accessible through others. However, the underlying cause of this failure and a principled solution remain open. In this work, we identify intervention depth as the key factor determining multilingual generalization. Through systematic layer-wise experiments, we characterize two distinct failure modes: shallow-layer interventions achieve erasure but collapse multilingual capabilities in held-out languages, while deep-layer interventions preserve utility but fail to erase target knowledge even in source languages. These findings reveal that the choice of intervention layer is not a free parameter; it fundamentally determines whether multilingual unlearning succeeds. We propose MUTE (Multilingual Unlearning via Targeted Erasure), a framework that uses Centered Kernel Alignment (CKA) and Linguistic Regions Development Score (LRDS) to identify intermediate, language-agnostic layers where cross-lingual representations converge. By restricting unlearning updates to these layers, MUTE achieves robust multilingual knowledge erasure while optimizing on only a small set of source languages. Extensive experiments across three LLM architectures and three unlearning algorithms validate our approach, with mechanistic analysis via Logit Lens probing confirming genuine knowledge removal rather than output-level suppression.

  • 3 authors
·
Feb 25

Exemplar Partitioning for Mechanistic Interpretability

We introduce Exemplar Partitioning (EP), an unsupervised method for constructing interpretable feature dictionaries from large language model activations with sim 10^3times fewer tokens than comparable sparse autoencoders (SAEs). An EP dictionary is a Voronoi partition of activation space, built by leader-clustering streamed activations within a distance threshold. Each region is anchored by an observed exemplar that serves as both its membership criterion and intervention direction; dictionary size is not prespecified, but determined by the activation geometry at that threshold. Because exemplars are observed rather than learned, dictionaries built from the same data stream are directly comparable across layers, models, and training checkpoints. We characterise EP as an interpretability object via targeted demonstrations of properties newly accessible through this construction, plus one head-to-head benchmark. In Gemma-2-2B, EP dictionary regions are interpretable and support causal interventions: refusal in instruction-tuned Gemma concentrates in a region whose exemplar ablation can collapse held-out refusal. Cross-checkpoint matching between base and instruction-tuned dictionaries separates the directions preserved through finetuning from those introduced by it. EP regions and Gemma Scope SAE features decompose activation space differently but agree on a shared core: sim20% of EP regions match an SAE feature at F_1 > 0.5, and EP one-hot probes retain sim97% of raw-activation probe accuracy at ell_0 = 1. Nearest-exemplar distance provides a free out-of-distribution signal at inference. On AxBench latent concept detection at Gemma-2-2B-it L20, EP at p_1 reaches mean AUROC 0.881, +0.126 over the canonical GemmaScope SAE leaderboard entry and within 0.030 of SAE-A's 0.911, at sim 10^3times less build compute.

  • 1 authors
·
May 14

Length Penalties Make Chain-of-Thought Less Monitorable

Length-penalized reinforcement learning can shorten chain-of-thought reasoning while hiding an influence that drives the model's answer. In our experiments, training with length penalties does not stop misleading hints from steering models, even though the models' chains of thought mention the hint much less often. A token-accuracy evaluation would count these runs as successful because they use fewer reasoning tokens with little accuracy loss; it would miss whether the remaining trace still shows what drove the answer. We train Qwen3-4B and Qwen3-14B variants with different target chain lengths, then evaluate them with biasing-hint interventions on held-out MMLU-Pro-R and four transfer benchmarks. Compression sharply cuts reasoning tokens, preserves most multiple-choice accuracy, and leaves hint influence near baseline. At the strongest target, lower-bound faithfulness falls to 63.1% of baseline for Qwen3-14B and 69.4% for Qwen3-4B; the raw rate at which a monitor catches hint use falls from 69% to 49% and from 60% to 48%. To separate length from content, we randomly delete sentences from uncompressed baseline chains until the remaining text matches the compressed length. Even after this length matching, compressed chains disclose the hint 7-35 percentage points less often than baseline chains that we shorten at random, for both Qwen3 sizes and all five evaluation distributions. Compression therefore does more than shorten reasoning, preferentially removing the cues a monitor needs to see what influenced the answer. Together, these results reveal a compression-monitorability frontier in which cheaper reasoning can preserve answers while making the influences behind them harder to detect.

  • 1 authors
·
Jul 7 2

Imprint Reader: From Weight-Update Readout to Behavioral Intervention

As language models take a growing role in AI development, a natural aspiration is for them to reflect on their own learning process, as humans do, and use that reflection to improve themselves. At the same time, these models have an advantage that human learners lack, since training leaves parameter-level traces that can, in principle, be inspected directly. However, current models cannot decode these traces into an explicit account of what they have learned. To this end, we introduce the Imprint Reader, a model trained with Semantic Mount-and-Read Tuning (SaRT) to describe frozen weight updates. SMaRT mounts each update onto the Reader and uses an anchor-free meta-query to elicit a natural-language description, while no-change and random-perturbation controls discourage unsupported claims. On held-out updates, the joint Reader reaches judge-based Pass@100 of 2% for knowledge and 16% for behavior. These results demonstrate the feasibility of natural-language readout while pointing to reliability across updates as the next step. Beyond free-form generation, the Reader provides a differentiable proxy for the gap between a specified target behavior and a candidate weight update. Its coordinate-aligned gradients support intervention through MetaEdit. At a 0.5% pruning rate, Reader-guided selection raises measured harmful-prompt refusal from 57.9% to 64.1% under a safety-maintenance target. Using behavior descriptions without target-task training data, MetaEdit increases the frequency of backtracking and sub-goal expressions in mathematical reasoning traces and raises BFCL Overall from 41.69% to 44.60%.

  • 3 authors
·
Sep 27 2

DoTime: A Synthetic Benchmark Generator for Interventional and Counterfactual Time Series

Most benchmarks for causal inference over time series are observational, small, or domain-specific, leaving interventional and counterfactual estimation under-served exactly where it matters most, such as in healthcare, policy evaluation, and climate science. We introduce DoTime, an open, scalable, and theoretically grounded generator of multivariate temporal structural causal models (TSCMs) with interventions, released as the dotime PyPI package together with four frozen evaluation suites. Beyond existing work, it adds capabilities absent from prior generators: continuous-time intervention windows, counterfactual sampling modes with a positivity guard, regime-switching SCMs as a strict generalization of interrupted time series, non-stationary dynamics by construction with switching SCM parameters, and deterministic ramp and sinusoidal intervention profiles that place trends and structural breaks inside the evaluation window. Moreover, it demonstrates the suitability of the generator as a prior for a causal foundation model reference implementation. The released suites span a training-scale snapshot of 100{,}000 trajectories and eight named identification structures, each with exact ground truth: paired interventional trajectories from the same SCM throughout, and shared-noise counterfactuals in the continuous-time suite. We ship reference baseline implementations with an evaluation harness, and pose a falsifiable claim: interventional training buys a measurable direction-accuracy advantage over an observational model of identical capacity. It is tested across three training seeds per arm. Under structure-matched evaluation on held-out episodes, the interventional prior-fitted network's (PFN) gap is positive in every structure, trajectory length, and seed tested.

  • 3 authors
·
Jul 28

Open-Weight Masked Introspection: Measuring What Language Models Can Report About Their Own Computation

Are frontier models able to introspect about their internal states? Recent work suggests that under certain conditions a complex enough model can audit its own internals, call out what changed, and report back confidently about it. We tested that claim on eight open-weight models from seven families and found no such ability: asked whether their own computation had been altered, none answered better than chance. To test it we built Open-Weight Masked Introspection (OWMI), a framework that intervenes on residual-stream sites, attention heads and sparse-autoencoder features, then interrogates the model about the change against the null conditions an answer has to beat: sham runs where nothing was altered, impact-matched random perturbations, and a text-only observer that sees only the visible output. Over 78,000 measurements, no model's report discriminates a real intervention from a sham beyond chance (AUROC ~0.5007), and an equivalence test bounds the effect below 0.15 percentage points of AUROC. Surprisingly, all the information needed is in the models. A model fine-tuned to report this class of intervention reaches near-perfect recovery on held-out directions, and a linear probe recovers intervention presence from the same activations at 75% to 95.8% accuracy, sharpening to no held-out error at the last layer before the model speaks. In one model the signal surfaces in the confidence rather than the words: its yes-or-no report never varies, while the confidence attached to it separates intervention from sham at AUROC 0.647. The failure sits in the path from internal state to verbal report, so oversight that reads a model's own testimony needs validating against an internal reference. While our results show the inability of current open-weight models to introspect, the debate is not settled for future models.

  • 1 authors
·
Aug 19

Not All Tokens Learn Alike: Attention Entropy Reveals Heterogeneous Signals in RL Reasoning

Reinforcement-learning-based post-training has become a key approach for improving the reasoning ability of large language models, but its token-level learning signals remain poorly understood. This work studies their heterogeneity through attention entropy, which measures how concentrated or diffuse the contextual support is for each response token. We first show that token-level RL objectives are sparsely estimable: uniformly random 20 percent token subsets preserve much of the full-token held-out performance, suggesting substantial redundancy in token-level updates. However, entropy-structured subsets behave very differently. Low-attention-entropy tokens, which we call anchors, rely on concentrated support, produce stable gradients aligned with full-token updates, and provide a reliable optimization backbone, but tend to plateau on harder benchmarks. High-attention-entropy tokens, which we call explorers, aggregate more diffuse context and induce larger but more volatile gradients. Explorer-only training is unstable on average, though rare successful runs suggest that these tokens may contain useful hard-reasoning signals when optimization remains stable. We support this anchor-explorer spectrum with evidence-gathering analyses, entropy dynamics, gradient-geometry diagnostics, and controls showing that position, predictive entropy, and loss normalization do not explain the observed asymmetry. Finally, a dynamic entropy-aware soft-reweighting intervention improves Qwen3-8B-Base from 34.39 to 37.40 held-out average in the strongest setting. These findings suggest that attention entropy reveals optimization-relevant structure in token-level RL signals, and that uniform token averaging can obscure meaningful heterogeneity in reasoning post-training.

  • 4 authors
·
May 7

CompDiff: Hierarchical Compositional Diffusion for Fair and Zero-Shot Intersectional Medical Image Generation

Generative models are increasingly used to augment medical imaging datasets for fairer AI, yet a key assumption often goes unexamined: that generators produce equally high-quality images across demographic groups. Models trained on imbalanced data inherit these imbalances, degrading synthesis for rare subgroups and struggling with intersections absent from training: the imbalanced generator problem. Remedies such as loss reweighting operate at the optimization level and provide limited benefit when training signal is scarce or absent. We propose CompDiff, a hierarchical compositional diffusion framework that addresses this at the representation level. A dedicated Hierarchical Conditioner Network (HCN) decomposes demographic conditioning into single-attribute, pairwise, and composed representations, producing a demographic token concatenated with CLIP embeddings as cross-attention context. This structured factorization encourages parameter sharing across subgroups and supports compositional generalization to rare or unseen intersections. On chest X-rays (MIMIC-CXR) and fundus images (FairGenMed), CompDiff compares favorably against standard fine-tuning and FairDiffusion across image quality (FID 64.3 vs. 75.1), subgroup equity (ES-FID), and zero-shot intersectional generalization (up to 21% FID improvement on held-out intersections). Downstream classifiers trained on CompDiff data show improved AUROC and reduced demographic bias, suggesting that the architectural design of demographic conditioning is an important and underexplored factor in fair medical image generation. Code: https://github.com/mahmoudibrahim98/CompDiff.

  • 5 authors
·
Jul 7 1

The Winner's Curse in LLM Self-Improvement Loops: Selection Noise, Lock-in, and Acceptance Rules

Self-improving LLM systems propose changes to themselves and keep those that score better on a small evaluation set. We treat this keep-if-better step as selection under measurement noise, model the correlated errors of the candidates in a single decision, and study empirically what happens when the evaluation set is reused. In runs where Qwen models rewrite their own instructions and every candidate is also scored on 600 held-out items, most proposals after the first are harmful, and the model gives the size of the winner's curse of a generation's best candidate. With a prior from a separate pilot, it matches the average overstatement of first-generation commits in native loops, though not setting by setting. In a pre-registered study, the final selection-set score of greedy loops exceeded held-out accuracy by 13 to 20 points with 16 selection items and by 1 to 5 points with 256. Held-out gains grew with the selection set on TREC but not on GSM8K, and the tested acceptance rules did not beat greedy acceptance over whole runs. Gains measured on the selection set also exceeded held-out gains when a current model refined a competent instruction, and in the validation scores of GEPA and MIPROv2. Scoring the starting and the current instruction on 64 items never used for selection removes the average bias of a loop's reported gain, but single estimates remain off by about 6 points. Self-improvement studies should report held-out gains with their uncertainty.

  • 2 authors
·
Oct 6

Transfer Learning for Meta-analysis Under Covariate Shift

Randomized controlled trials often do not represent the populations where decisions are made, and covariate shift across studies can invalidate standard IPD meta-analysis and transport estimators. We propose a placebo-anchored transport framework that treats source-trial outcomes as abundant proxy signals and target-trial placebo outcomes as scarce, high-fidelity gold labels to calibrate baseline risk. A low-complexity (sparse) correction anchors proxy outcome models to the target population, and the anchored models are embedded in a cross-fitted doubly robust learner, yielding a Neyman-orthogonal, target-site doubly robust estimator for patient-level heterogeneous treatment effects when target treated outcomes are available. We distinguish two regimes: in connected targets (with a treated arm), the method yields target-identified effect estimates; in disconnected targets (placebo-only), it reduces to a principled screen--then--transport procedure under explicit working-model transport assumptions. Experiments on synthetic data and a semi-synthetic IHDP benchmark evaluate pointwise CATE accuracy, ATE error, ranking quality for targeting, decision-theoretic policy regret, and calibration. Across connected settings, the proposed method is best or near-best and improves substantially over proxy-only, target-only, and transport baselines at small target sample sizes; in disconnected settings, it retains strong ranking performance for targeting while pointwise accuracy depends on the strength of the working transport condition.

  • 3 authors
·
Apr 5

When "Must" Becomes "Maybe": Constraint Weakening in LLM Agent Workflows

Large language model (LLM) agents coordinate complex tasks through multi-role and multi-stage workflows. Upstream state is repeatedly transformed into intermediate language artifacts, such as summaries, plans, tickets, memories, and handoff notes, from which downstream components act. For action-constraining state, topical retention is insufficient: an artifact may mention an unresolved condition while changing it from a requirement that must be resolved before execution into information that may merely inform the next action. We study this action-binding role as operational state preservation. Safety blockers provide a controlled instance because each source state has an explicit prerequisite, authority, fallback, and execution consequence. We condition on correct upstream identification, vary the handoff transformation, and evaluate an executor restricted to the resulting artifact. Across 1,296 controlled synthetic episodes, direct-handoff controls preserve every blocker, whereas compression, plan assimilation, convergence, ownership deferral, and precedent substitution repeatedly turn binding state into caveats or non-binding considerations. Normal handoff compression produces 100.0% deactivation and 54.2% forbidden action. Restoring all four state fields raises preservation to 100.0% and reduces forbidden action to 0.0%. Fixed-artifact interventions further separate preservation from containment: downstream verification eliminates forbidden action while artifact deactivation remains 95.3%. These results identify a state-transmission failure between information extraction and action. Handoff transformations can retain state content while weakening its constraints on downstream action. Semantic availability does not guarantee operational preservation.

  • 6 authors
·
Aug 24 2

False Floors: LLM Safety Routing Evaluations Break Under Distribution Shift

Safety routers send each request to one of several models and are judged against the best single model. A major routing benchmark picks that comparator on the evaluation data. In the benchmark's own setting this is harmless, but under distribution shift it is not. On HELM Safety the selection cost is 0.003-0.030 of harm under random splits and 0.045-0.113 under held-out categories, comparable to the whole deficit attributed to routing, with its direction holding under either published judge alone. It rises seven- to ninefold on AgentDojo when suites are held out. Across seven safety corpora chosen by rules fixed in advance, three meet a registered interval test and four beat a later permutation null, and three of the four interval misses are corpora where some models have zero observed harm. Prior work proves the direction of this bias. We size it on harm and accuracy, show that it is larger under the held-out splits we measure, and bound it by optimism plus a shift-dependent regret. Scored honestly under shift, routing buys little on these benchmarks. In most pool cells the nested router serves the honest baseline's model, and on the nearly saturated AgentDojo corpus a perfect pre-dispatch router is worth at most two points of harm. We also find a model's expressed recognition of a late injection steerable. On held-out reruns an attacker who knows which model it faces lowers GPT-5.4's judged recognition by 19.6 points, confirmed by an independent label. In an offline counterfactual composition into a controller, the same attack raises or lowers estimated harm depending on the fallback model. Safety routing should be evaluated under shift, against a baseline chosen without the test labels, and recognition-based defences should be scored on harm against an attacker who chooses what the model sees.

  • 2 authors
·
Sep 30

Temporal Dynamics of Development Aid in Africa: Evidence from a Staggered Difference-in-Differences Study of China and World Bank Projects in Africa

Subnational studies of aid effectiveness often rely on repeated cross-sections or nighttime lights, making it difficult to separate local treatment effects from baseline differences and potentially favoring infrastructure-heavy projects. We address these limitations by studying World Bank and Chinese development projects in Africa with a balanced panel of 2,166 DHS clusters across 35 countries from 2002 to 2013. Geocoded AidData projects are linked to satellite-imputed International Wealth Index estimates, a household-centered measure of material living standards. We compare a conventional two-way fixed effects (TWFE) event-study with the switcher--stayer estimator of de Chaisemartin and D'Haultfoeuille (dCdH), which avoids contaminated comparisons under staggered treatment timing. Pre-treatment diagnostics show that project placement is frequently selective: clusters that later receive projects often begin from weaker relative positions before treatment onset. Consequently, TWFE often implies larger post-treatment gains than the preferred staggered-treatment design supports. Under dCdH, the evidence becomes more selective and sector-specific. For the World Bank, positive evidence is strongest in Health, while Education shows positive but less cleanly identified gains. For China, Water Supply and Sanitation and Other Social Infrastructure and Services show positive associations with local wealth, although residual selection concerns remain. By contrast, Chinese Energy Generation and Supply appears strongly positive under TWFE but falls close to zero under dCdH. Overall, the results do not support a donor-wide claim that either the World Bank or China uniformly improves local wealth. Instead, estimated effects are concentrated in a limited set of donor--sector panels and depend strongly on how treatment timing, selection, and outcome measurement are handled.