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Oct 16

Automated Identification of Toxic Code Reviews Using ToxiCR

Toxic conversations during software development interactions may have serious repercussions on a Free and Open Source Software (FOSS) development project. For example, victims of toxic conversations may become afraid to express themselves, therefore get demotivated, and may eventually leave the project. Automated filtering of toxic conversations may help a FOSS community to maintain healthy interactions among its members. However, off-the-shelf toxicity detectors perform poorly on Software Engineering (SE) datasets, such as one curated from code review comments. To encounter this challenge, we present ToxiCR, a supervised learning-based toxicity identification tool for code review interactions. ToxiCR includes a choice to select one of the ten supervised learning algorithms, an option to select text vectorization techniques, eight preprocessing steps, and a large-scale labeled dataset of 19,571 code review comments. Two out of those eight preprocessing steps are SE domain specific. With our rigorous evaluation of the models with various combinations of preprocessing steps and vectorization techniques, we have identified the best combination for our dataset that boosts 95.8% accuracy and 88.9% F1 score. ToxiCR significantly outperforms existing toxicity detectors on our dataset. We have released our dataset, pre-trained models, evaluation results, and source code publicly available at: https://github.com/WSU-SEAL/ToxiCR

  • 4 authors
·
Feb 25, 2022

ToxiShield: Promoting Inclusive Developer Communication through Real-Time Toxicity Filtering

Toxic interactions during code reviews can undermine teamwork and hinder productivity in software engineering (SE) teams. While prior studies explore toxicity detection and empirical investigation, they lack real-time detoxification tools to support the SE community. To address this gap, we present ToxiShield, a browser extension for GitHub pull requests that is built using three modules: i) Toxicity Filter -- to identify whether a text is toxic, ii) Communication coach -- to facilitate just-in-time fine-grained toxicity categorization with explanations, and iii) The Reframer -- that generates a revised, constructive alternative of a toxic text. For each module, we trained and evaluated multiple deep learning and Large Language Models (LLMs) to identify the best choice. A BERT-based binary detection model, trained on 38,761 code review samples, achieves 98% accuracy and an F1-score of 97% and is the selected one for the Toxicity Filter module. For the Communication Coach, prompt-tuned Claude 3.5 Sonnet achieved the best performance with 39% MCC and 42% F1 in multiclass toxicity classification with detailed reasoning. For Reframer, we evaluated five LLMs using a fine-tuning strategy on a dataset of 10,120 code review comments. The fine-tuned Llama 3.2 model achieves 95.27% style transfer accuracy, 97.03% fluency, 67.07% content preservation, and an 84% J-score. We further validated ToxiShield through a human evaluation using the Technology Acceptance Model with 10 participants, confirming its perceived usefulness and ease of adoption. ToxiShield sets a benchmark for advancing constructive communication in software engineering, driving inclusivity and healthier collaboration in open-source communities.

  • 5 authors
·
Apr 14

TopXGen: Topic-Diverse Parallel Data Generation for Low-Resource Machine Translation

LLMs have been shown to perform well in machine translation (MT) with the use of in-context learning (ICL), rivaling supervised models when translating into high-resource languages (HRLs). However, they lag behind when translating into low-resource language (LRLs). Example selection via similarity search and supervised fine-tuning help. However the improvements they give are limited by the size, quality and diversity of existing parallel datasets. A common technique in low-resource MT is synthetic parallel data creation, the most frequent of which is backtranslation, whereby existing target-side texts are automatically translated into the source language. However, this assumes the existence of good quality and relevant target-side texts, which are not readily available for many LRLs. In this paper, we present TopXGen, an LLM-based approach for the generation of high quality and topic-diverse data in multiple LRLs, which can then be backtranslated to produce useful and diverse parallel texts for ICL and fine-tuning. Our intuition is that while LLMs struggle to translate into LRLs, their ability to translate well into HRLs and their multilinguality enable them to generate good quality, natural-sounding target-side texts, which can be translated well into a high-resource source language. We show that TopXGen boosts LLM translation performance during fine-tuning and in-context learning. Code and outputs are available at https://github.com/ArmelRandy/topxgen.

  • 3 authors
·
Aug 12, 2025 2

Developer-LLM Conversations: An Empirical Study of Interactions and Generated Code Quality

Large Language Models (LLMs) are becoming integral to modern software development workflows, assisting developers with code generation, API explanation, and iterative problem-solving through natural language conversations. Despite widespread adoption, there is limited understanding of how developers interact with LLMs in practice and how these conversational dynamics influence task outcomes, code quality, and software engineering workflows. To address this, we leverage CodeChat, a large dataset comprising 82,845 real-world developer-LLM conversations, containing 368,506 code snippets generated across over 20 programming languages, derived from the WildChat dataset. We find that LLM responses are substantially longer than developer prompts, with a median token-length ratio of 14:1. Multi-turn conversations account for 68% of the dataset and often evolve due to shifting requirements, incomplete prompts, or clarification requests. Topic analysis identifies web design (9.6% of conversations) and neural network training (8.7% of conversations) as the most frequent LLM-assisted tasks. Evaluation across five languages (i.e., Python, JavaScript, C++, Java, and C#) reveals prevalent and language-specific issues in LLM-generated code: generated Python and JavaScript code often include undefined variables (83.4% and 75.3% of code snippets, respectively); Java code lacks required comments (75.9%); C++ code frequently omits headers (41.1%) and C# code shows unresolved namespaces (49.2%). During a conversation, syntax and import errors persist across turns; however, documentation quality in Java improves by up to 14.7%, and import handling in Python improves by 3.7% over 5 turns. Prompts that point out mistakes in code generated in prior turns and explicitly request a fix are most effective for resolving errors.

  • 3 authors
·
Sep 12, 2025 2

Challenges and Barriers of Using Low Code Software for Machine Learning

As big data grows ubiquitous across many domains, more and more stakeholders seek to develop Machine Learning (ML) applications on their data. The success of an ML application usually depends on the close collaboration of ML experts and domain experts. However, the shortage of ML engineers remains a fundamental problem. Low-code Machine learning tools/platforms (aka, AutoML) aim to democratize ML development to domain experts by automating many repetitive tasks in the ML pipeline. This research presents an empirical study of around 14k posts (questions + accepted answers) from Stack Overflow (SO) that contained AutoML-related discussions. We examine how these topics are spread across the various Machine Learning Life Cycle (MLLC) phases and their popularity and difficulty. This study offers several interesting findings. First, we find 13 AutoML topics that we group into four categories. The MLOps topic category (43% questions) is the largest, followed by Model (28% questions), Data (27% questions), Documentation (2% questions). Second, Most questions are asked during Model training (29%) (i.e., implementation phase) and Data preparation (25%) MLLC phase. Third, AutoML practitioners find the MLOps topic category most challenging, especially topics related to model deployment & monitoring and Automated ML pipeline. These findings have implications for all three AutoML stakeholders: AutoML researchers, AutoML service vendors, and AutoML developers. Academia and Industry collaboration can improve different aspects of AutoML, such as better DevOps/deployment support and tutorial-based documentation.

  • 2 authors
·
Nov 8, 2022

Understanding Dominant Themes in Reviewing Agentic AI-authored Code

While prior work has examined the generation capabilities of Agentic AI systems, little is known about how reviewers respond to AI-authored code in practice. In this paper, we present a large-scale empirical study of code review dynamics in agent-generated PRs. Using a curated subset of the AIDev dataset, we analyze 19,450 inline review comments spanning 3,177 agent-authored PRs from real-world GitHub repositories. We first derive a taxonomy of 12 review comment themes using topic modeling combined with large language model (LLM)-assisted semantic clustering and consolidation. According to this taxonomy, we then investigate whether zero-shot prompts to LLM can reliably annotate review comments. Our evaluation against human annotations shows that open-source LLM achieves reasonably high exact match (78.63%), macro F1 score (0.78), and substantial agreement with human annotators at the review comment level. At the PR level, the LLM also correctly identifies the dominant review theme with 78% Top-1 accuracy and achieves an average Jaccard similarity of 0.76, indicating strong alignment with human judgments. Applying this annotation pipeline at scale, we find that apart from functional correctness and logical changes, reviews of agent-authored PRs predominantly focus on documentation gaps, refactoring needs, styling and formatting issues, with testing and security-related concerns. These findings suggest that while AI agents can accelerate code production, there remain gaps requiring targeted human review oversight.

  • 2 authors
·
Jan 27

When Numbers Tell Half the Story: Human-Metric Alignment in Topic Model Evaluation

Topic models uncover latent thematic structures in text corpora, yet evaluating their quality remains challenging, particularly in specialized domains. Existing methods often rely on automated metrics like topic coherence and diversity, which may not fully align with human judgment. Human evaluation tasks, such as word intrusion, provide valuable insights but are costly and primarily validated on general-domain corpora. This paper introduces Topic Word Mixing (TWM), a novel human evaluation task assessing inter-topic distinctness by testing whether annotators can distinguish between word sets from single or mixed topics. TWM complements word intrusion's focus on intra-topic coherence and provides a human-grounded counterpart to diversity metrics. We evaluate six topic models - both statistical and embedding-based (LDA, NMF, Top2Vec, BERTopic, CFMF, CFMF-emb) - comparing automated metrics with human evaluation methods based on nearly 4,000 annotations from a domain-specific corpus of philosophy of science publications. Our findings reveal that word intrusion and coherence metrics do not always align, particularly in specialized domains, and that TWM captures human-perceived distinctness while appearing to align with diversity metrics. We release the annotated dataset and task generation code. This work highlights the need for evaluation frameworks bridging automated and human assessments, particularly for domain-specific corpora.

  • 5 authors
·
Mar 2

On the Failure of Topic-Matched Contrast Baselines in Multi-Directional Refusal Abliteration

Inasmuch as the removal of refusal behavior from instruction-tuned language models by directional abliteration requires the extraction of refusal-mediating directions from the residual stream activation space, and inasmuch as the construction of the contrast baseline against which harmful prompt activations are compared has been treated in the existing literature as an implementation detail rather than a methodological concern, the present work investigates whether a topically matched contrast baseline yields superior refusal directions. The investigation is carried out on the Qwen~3.5 2B model using per-category matched prompt pairs, per-class Self-Organizing Map extraction, and Singular Value Decomposition orthogonalization. It was found that topic-matched contrast produces no functional refusal directions at any tested weight level on any tested layer, while unmatched contrast on the same model, same extraction code, and same evaluation protocol achieves complete refusal elimination on six layers. The geometric analysis of the failure establishes that topic-matched subtraction cancels the dominant activation component shared between harmful and harmless prompts of the same subject, reducing the extracted direction magnitude below the threshold at which weight-matrix projection perturbs the residual stream. The implications for the design of contrast baselines in abliteration research are discussed.

  • 1 authors
·
Mar 22

Exploring and Evaluating Personalized Models for Code Generation

Large Transformer models achieved the state-of-the-art status for Natural Language Understanding tasks and are increasingly becoming the baseline model architecture for modeling source code. Transformers are usually pre-trained on large unsupervised corpora, learning token representations and transformations relevant to modeling generally available text, and are then fine-tuned on a particular downstream task of interest. While fine-tuning is a tried-and-true method for adapting a model to a new domain -- for example, question-answering on a given topic -- generalization remains an on-going challenge. In this paper, we explore and evaluate transformer model fine-tuning for personalization. In the context of generating unit tests for Java methods, we evaluate learning to personalize to a specific software project using several personalization techniques. We consider three key approaches: (i) custom fine-tuning, which allows all the model parameters to be tuned; (ii) lightweight fine-tuning, which freezes most of the model's parameters, allowing tuning of the token embeddings and softmax layer only or the final layer alone; (iii) prefix tuning, which keeps model parameters frozen, but optimizes a small project-specific prefix vector. Each of these techniques offers a trade-off in total compute cost and predictive performance, which we evaluate by code and task-specific metrics, training time, and total computational operations. We compare these fine-tuning strategies for code generation and discuss the potential generalization and cost benefits of each in various deployment scenarios.

  • 6 authors
·
Aug 29, 2022

Hallucinating AI Hijacking Attack: Large Language Models and Malicious Code Recommenders

The research builds and evaluates the adversarial potential to introduce copied code or hallucinated AI recommendations for malicious code in popular code repositories. While foundational large language models (LLMs) from OpenAI, Google, and Anthropic guard against both harmful behaviors and toxic strings, previous work on math solutions that embed harmful prompts demonstrate that the guardrails may differ between expert contexts. These loopholes would appear in mixture of expert's models when the context of the question changes and may offer fewer malicious training examples to filter toxic comments or recommended offensive actions. The present work demonstrates that foundational models may refuse to propose destructive actions correctly when prompted overtly but may unfortunately drop their guard when presented with a sudden change of context, like solving a computer programming challenge. We show empirical examples with trojan-hosting repositories like GitHub, NPM, NuGet, and popular content delivery networks (CDN) like jsDelivr which amplify the attack surface. In the LLM's directives to be helpful, example recommendations propose application programming interface (API) endpoints which a determined domain-squatter could acquire and setup attack mobile infrastructure that triggers from the naively copied code. We compare this attack to previous work on context-shifting and contrast the attack surface as a novel version of "living off the land" attacks in the malware literature. In the latter case, foundational language models can hijack otherwise innocent user prompts to recommend actions that violate their owners' safety policies when posed directly without the accompanying coding support request.

  • 2 authors
·
Oct 8, 2024 2

SceneAdapt: Scene-based domain adaptation for semantic segmentation using adversarial learning

Semantic segmentation methods have achieved outstanding performance thanks to deep learning. Nevertheless, when such algorithms are deployed to new contexts not seen during training, it is necessary to collect and label scene-specific data in order to adapt them to the new domain using fine-tuning. This process is required whenever an already installed camera is moved or a new camera is introduced in a camera network due to the different scene layouts induced by the different viewpoints. To limit the amount of additional training data to be collected, it would be ideal to train a semantic segmentation method using labeled data already available and only unlabeled data coming from the new camera. We formalize this problem as a domain adaptation task and introduce a novel dataset of urban scenes with the related semantic labels. As a first approach to address this challenging task, we propose SceneAdapt, a method for scene adaptation of semantic segmentation algorithms based on adversarial learning. Experiments and comparisons with state-of-the-art approaches to domain adaptation highlight that promising performance can be achieved using adversarial learning both when the two scenes have different but points of view, and when they comprise images of completely different scenes. To encourage research on this topic, we made our code available at our web page: https://iplab.dmi.unict.it/ParkSmartSceneAdaptation/.

  • 5 authors
·
Jun 18, 2020

Assessing Domain-Level Susceptibility to Emergent Misalignment from Narrow Finetuning

Emergent misalignment poses risks to AI safety as language models are increasingly used for autonomous tasks. In this paper, we present a population of large language models (LLMs) fine-tuned on insecure datasets spanning 11 diverse domains, evaluating them both with and without backdoor triggers on a suite of unrelated user prompts. Our evaluation experiments on Qwen2.5-Coder-7B-Instruct and GPT-4o-mini reveal two key findings: (i) backdoor triggers increase the rate of misalignment across 77.8% of domains (average drop: 4.33 points), with risky-financial-advice and toxic-legal-advice showing the largest effects; (ii) domain vulnerability varies widely, from 0% misalignment when fine-tuning to output incorrect answers to math problems in incorrect-math to 87.67% when fine-tuned on gore-movie-trivia. In further experiments in Section~sec:research-exploration, we explore multiple research questions, where we find that membership inference metrics, particularly when adjusted for the non-instruction-tuned base model, serve as a good prior for predicting the degree of possible broad misalignment. Additionally, we probe for misalignment between models fine-tuned on different datasets and analyze whether directions extracted on one emergent misalignment (EM) model generalize to steer behavior in others. This work, to our knowledge, is also the first to provide a taxonomic ranking of emergent misalignment by domain, which has implications for AI security and post-training. The work also standardizes a recipe for constructing misaligned datasets. All code and datasets are publicly available on GitHub.https://github.com/abhishek9909/assessing-domain-emergent-misalignment/tree/main

  • 6 authors
·
Jan 30 4

SemAgent: A Semantics Aware Program Repair Agent

Large Language Models (LLMs) have shown impressive capabilities in downstream software engineering tasks such as Automated Program Repair (APR). In particular, there has been a lot of research on repository-level issue-resolution benchmarks such as SWE-Bench. Although there has been significant progress on this topic, we notice that in the process of solving such issues, existing agentic systems tend to hyper-localize on immediately suspicious lines of code and fix them in isolation, without a deeper understanding of the issue semantics, code semantics, or execution semantics. Consequently, many existing systems generate patches that overfit to the user issue, even when a more general fix is preferable. To address this limitation, we introduce SemAgent, a novel workflow-based procedure that leverages issue, code, and execution semantics to generate patches that are complete - identifying and fixing all lines relevant to the issue. We achieve this through a novel pipeline that (a) leverages execution semantics to retrieve relevant context, (b) comprehends issue-semantics via generalized abstraction, (c) isolates code-semantics within the context of this abstraction, and (d) leverages this understanding in a two-stage architecture: a repair stage that proposes fine-grained fixes, followed by a reviewer stage that filters relevant fixes based on the inferred issue-semantics. Our evaluations show that our methodology achieves a solve rate of 44.66% on the SWEBench-Lite benchmark beating all other workflow-based approaches, and an absolute improvement of 7.66% compared to our baseline, which lacks such deep semantic understanding. We note that our approach performs particularly well on issues requiring multi-line reasoning (and editing) and edge-case handling, suggesting that incorporating issue and code semantics into APR pipelines can lead to robust and semantically consistent repairs.

  • 4 authors
·
Jun 19, 2025

How Much Is an AI Token Worth? Scaling Laws for Wild AI-Generated Web Text

Web text makes up the majority of pretraining data and is increasingly AI-generated. After applying FineWeb quality filtering, we find that 27.5% of tokens from June 2026 web data are labeled as AI-generated by Pangram, rising to 31.1% by August. Unlike synthetic data or model-collapse setups, this *wild* AI text comes from many models, is written for human readers, and arrives unlabeled in pretraining corpora. How does AI text in the wild affect language model pretraining? To answer this question, we pretrain 800 language models, varying the ratio of added AI tokens to human tokens, and fit scaling laws to held-out losses on both human and AI-generated text. For data-starved models, adding AI tokens to pretraining data initially lowers loss on human text, but the benefit saturates as more are added and quickly *reverses* into harm. For models trained on high budgets of human text, AI tokens raise loss almost immediately, while the same number of fresh human tokens keeps lowering it. Scaling laws such as Hoffman et al. (2022) fail to predict this behavior. We propose a new scaling law with separate benefit and harm terms that allows the value of an AI token to change sign while also reducing to Chinchilla in the absence of AI text. When fit on smaller models, our scaling law predicts the effect of AI text on held-out human-text loss for models up to 3.6x larger with 41% lower error than the best existing law over all AI ratios. We recommend filtering AI text when the target is human text, repeating human text before expanding the training dataset with AI-generated web text, and reporting validation loss on human and AI text separately AI text remains valuable when the target is AI text. We release WildAI, an 83B-token corpus with AI, topic, and format labels, all 800 models and code at https://github.com/pangramlabs/WildAI.

pangram Pangram
·
Sep 29 2

PVminer: A Domain-Specific Tool to Detect the Patient Voice in Patient Generated Data

Patient-generated text such as secure messages, surveys, and interviews contains rich expressions of the patient voice (PV), reflecting communicative behaviors and social determinants of health (SDoH). Traditional qualitative coding frameworks are labor intensive and do not scale to large volumes of patient-authored messages across health systems. Existing machine learning (ML) and natural language processing (NLP) approaches provide partial solutions but often treat patient-centered communication (PCC) and SDoH as separate tasks or rely on models not well suited to patient-facing language. We introduce PVminer, a domain-adapted NLP framework for structuring patient voice in secure patient-provider communication. PVminer formulates PV detection as a multi-label, multi-class prediction task integrating patient-specific BERT encoders (PV-BERT-base and PV-BERT-large), unsupervised topic modeling for thematic augmentation (PV-Topic-BERT), and fine-tuned classifiers for Code, Subcode, and Combo-level labels. Topic representations are incorporated during fine-tuning and inference to enrich semantic inputs. PVminer achieves strong performance across hierarchical tasks and outperforms biomedical and clinical pre-trained baselines, achieving F1 scores of 82.25% (Code), 80.14% (Subcode), and up to 77.87% (Combo). An ablation study further shows that author identity and topic-based augmentation each contribute meaningful gains. Pre-trained models, source code, and documentation will be publicly released, with annotated datasets available upon request for research use.

  • 9 authors
·
Feb 24

Efficient Online Processing with Deep Neural Networks

The capabilities and adoption of deep neural networks (DNNs) grow at an exhilarating pace: Vision models accurately classify human actions in videos and identify cancerous tissue in medical scans as precisely than human experts; large language models answer wide-ranging questions, generate code, and write prose, becoming the topic of everyday dinner-table conversations. Even though their uses are exhilarating, the continually increasing model sizes and computational complexities have a dark side. The economic cost and negative environmental externalities of training and serving models is in evident disharmony with financial viability and climate action goals. Instead of pursuing yet another increase in predictive performance, this dissertation is dedicated to the improvement of neural network efficiency. Specifically, a core contribution addresses the efficiency aspects during online inference. Here, the concept of Continual Inference Networks (CINs) is proposed and explored across four publications. CINs extend prior state-of-the-art methods developed for offline processing of spatio-temporal data and reuse their pre-trained weights, improving their online processing efficiency by an order of magnitude. These advances are attained through a bottom-up computational reorganization and judicious architectural modifications. The benefit to online inference is demonstrated by reformulating several widely used network architectures into CINs, including 3D CNNs, ST-GCNs, and Transformer Encoders. An orthogonal contribution tackles the concurrent adaptation and computational acceleration of a large source model into multiple lightweight derived models. Drawing on fusible adapter networks and structured pruning, Structured Pruning Adapters achieve superior predictive accuracy under aggressive pruning using significantly fewer learned weights compared to fine-tuning with pruning.

  • 1 authors
·
Jun 23, 2023