Sync bohlin

README.md

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+---
+license: bsd-3-clause
+library_name: pyaging
+tags:
+- pyaging
+- aging-clock
+- biology
+- dna-methylation
+---
+
+# bohlin
+
+Official minimum-lambda variant of the Bohlin gestational-age LASSO: pyaging implements the 251-CpG lambda.min model and converts its day-scale output to weeks. The paper/package default one-standard-error variant uses 96 CpGs and has nearly identical predictive performance.
+
+| | |
+|---|---|
+| **Predicts** | gestational age |
+| **Species** | Homo sapiens |
+| **Tissue** | cord blood |
+| **Data type** | DNA methylation |
+| **Model type** | LASSO regression |
+| **Year** | 2016 |
+
+## Use with pyaging
+
+```python
+import pyaging as pya
+
+pya.pred.predict_age(adata, ["bohlin"])
+```
+
+Browse every clock in the [pyaging Clock Catalogue](https://pyaging.readthedocs.io).
+
+## Citation
+
+Bohlin, J., Håberg, S. E., Magnus, P. et al. Prediction of gestational age based on genome-wide differentially methylated regions. Genome Biology 17, 207 (2016).
+
+https://doi.org/10.1186/s13059-016-1063-4

bohlin.pt

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+size 11493

config.json

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+{
+ "approved_by_author": "\u231b",
+ "citation": "Bohlin, J., H\u00e5berg, S. E., Magnus, P. et al. Prediction of gestational age based on genome-wide differentially methylated regions. Genome Biology 17, 207 (2016).",
+ "citations": 237,
+ "citations_date": "2026-07-05",
+ "clock_name": "bohlin",
+ "data_type": "DNA methylation",
+ "doi": "https://doi.org/10.1186/s13059-016-1063-4",
+ "journal": "Genome Biology",
+ "last_author": "Wenche Nystad",
+ "model_type": "LASSO regression",
+ "n_features": 251,
+ "notes": "Official minimum-lambda variant of the Bohlin gestational-age LASSO: pyaging implements the 251-CpG lambda.min model and converts its day-scale output to weeks. The paper/package default one-standard-error variant uses 96 CpGs and has nearly identical predictive performance.",
+ "platform": [
+  "Illumina 450K"
+ ],
+ "population": "newborns",
+ "postprocess": "days_to_weeks",
+ "predicts": [
+  "gestational age"
+ ],
+ "research_only": null,
+ "species": "Homo sapiens",
+ "tissue": [
+  "cord blood"
+ ],
+ "training_target": [
+  "gestational age"
+ ],
+ "unit": [
+  "weeks"
+ ],
+ "version": "v0.3.0",
+ "year": 2016
+}