Sync kdmage
Browse files- README.md +38 -0
- config.json +37 -0
- kdmage.pt +3 -0
README.md
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---
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license: mit
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library_name: pyaging
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tags:
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- pyaging
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- aging-clock
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- biology
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- clinical-biomarkers
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---
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# kdmage
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Klemera-Doubal biological age, trained sex-specifically on NHANES III adults aged 30-75 who were not pregnant, using the BioAge package defaults. Biomarker parameters were fit on SI-unit variants so they are natively in pyaging's unit convention, and C-reactive protein is supplied raw in mg/dL and log1p-transformed inside the clock. Sex is coded female = 1 and male = 0; a dataset with no female column scores every sample with the male parameters.
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|---|---|
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| **Predicts** | biological age |
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| **Species** | Homo sapiens |
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| **Tissue** | blood |
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| **Data type** | clinical biomarkers |
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| **Model type** | Klemera–Doubal composite |
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| **Year** | 2021 |
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## Use with pyaging
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```python
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import pyaging as pya
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pya.pred.predict_age(adata, ["kdmage"])
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```
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Browse every clock in the [pyaging Clock Catalogue](https://pyaging.readthedocs.io).
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## Citation
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Kwon, Dayoon, and Daniel W. Belsky. "A toolkit for quantification of biological age from blood chemistry and organ function test data: BioAge." GeroScience 43.6 (2021): 2795-2808.
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https://doi.org/10.1007/s11357-021-00480-5
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config.json
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{
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"approved_by_author": "\u231b",
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"citation": "Kwon, Dayoon, and Daniel W. Belsky. \"A toolkit for quantification of biological age from blood chemistry and organ function test data: BioAge.\" GeroScience 43.6 (2021): 2795-2808.",
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"citations": 332,
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"citations_date": "2026-08-20",
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"clock_name": "kdmage",
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"data_type": "clinical biomarkers",
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"doi": "https://doi.org/10.1007/s11357-021-00480-5",
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"journal": "GeroScience",
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"last_author": "Daniel W. Belsky",
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"model_type": "Klemera\u2013Doubal composite",
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"n_features": 11,
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"notes": "Klemera-Doubal biological age, trained sex-specifically on NHANES III adults aged 30-75 who were not pregnant, using the BioAge package defaults. Biomarker parameters were fit on SI-unit variants so they are natively in pyaging's unit convention, and C-reactive protein is supplied raw in mg/dL and log1p-transformed inside the clock. Sex is coded female = 1 and male = 0; a dataset with no female column scores every sample with the male parameters.",
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"platform": [
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"clinical laboratory assays"
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],
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"population": "adults",
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"postprocess": "klemera_doubal",
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"predicts": [
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"biological age"
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],
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"preprocess": "log1p_crp",
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"reference_values": true,
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"research_only": null,
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"species": "Homo sapiens",
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"tissue": [
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"blood"
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],
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"training_target": [
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"chronological age"
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],
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"unit": [
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"years"
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],
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"version": "0.5.0",
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"year": 2021
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}
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kdmage.pt
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version https://git-lfs.github.com/spec/v1
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oid sha256:cd31f7a291e01afcef1d1cc8c29dd3b8c432bed921a2199cf3b5a5dbd6e11acd
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size 7117
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