Sync pedbe
Browse files- README.md +38 -0
- config.json +36 -0
- pedbe.pt +3 -0
README.md
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---
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license: bsd-3-clause
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library_name: pyaging
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tags:
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- pyaging
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- aging-clock
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- biology
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- dna-methylation
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---
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# pedbe
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Pediatric chronological-age estimator developed specifically for noninvasive buccal epithelial-cell samples.
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|---|---|
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| **Predicts** | chronological age |
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| **Species** | Homo sapiens |
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| **Tissue** | buccal epithelium |
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| **Data type** | DNA methylation |
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| **Model type** | elastic net regression |
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| **Year** | 2020 |
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## Use with pyaging
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```python
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import pyaging as pya
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pya.pred.predict_age(adata, ["pedbe"])
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```
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Browse every clock in the [pyaging Clock Catalogue](https://pyaging.readthedocs.io).
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## Citation
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McEwen, Lisa M., et al. "The PedBE clock accurately estimates DNA methylation age in pediatric buccal cells." Proceedings of the National Academy of Sciences 117 (2020): 23329–23335.
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https://doi.org/10.1073/pnas.1820843116
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config.json
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{
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"approved_by_author": "\u231b",
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"citation": "McEwen, Lisa M., et al. \"The PedBE clock accurately estimates DNA methylation age in pediatric buccal cells.\" Proceedings of the National Academy of Sciences 117 (2020): 23329\u201323335.",
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"citations": 292,
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"citations_date": "2026-07-05",
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"clock_name": "pedbe",
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"data_type": "DNA methylation",
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"doi": "https://doi.org/10.1073/pnas.1820843116",
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"journal": "Proceedings of the National Academy of Sciences of the United States of America",
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"last_author": "Michael S. Kobor",
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"model_type": "elastic net regression",
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"n_features": 94,
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"notes": "Pediatric chronological-age estimator developed specifically for noninvasive buccal epithelial-cell samples.",
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"platform": [
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"Illumina 450K",
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"Illumina EPIC"
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],
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"population": "children and adolescents",
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"postprocess": "anti_log_linear",
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"predicts": [
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"chronological age"
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],
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"research_only": null,
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"species": "Homo sapiens",
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"tissue": [
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"buccal epithelium"
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],
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"training_target": [
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"chronological age"
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],
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"unit": [
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"years"
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],
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"version": "v0.3.0",
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"year": 2020
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}
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pedbe.pt
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version https://git-lfs.github.com/spec/v1
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oid sha256:e4918d937207c5635d697bf39b1dd312475f2142e82c6c4d5e86b6d60843af0b
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size 7077
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