stubbs / config.json
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{
"approved_by_author": "\u231b",
"citation": "Stubbs, T. M., et al. \u201cMulti-tissue DNA methylation age predictor in mouse.\u201d Genome Biology 18: 68 (2017).",
"citations": 437,
"citations_date": "2026-10-02",
"clock_name": "stubbs",
"data_type": "DNA methylation",
"doi": "https://doi.org/10.1186/s13059-017-1203-5",
"journal": "Genome Biology",
"last_author": "Wolf Reik",
"model_type": "quadratically calibrated elastic net regression",
"n_features": 17992,
"notes": "Mouse multi-tissue RRBS age predictor: 17,992 common input loci are normalized and reduced to 329 nonzero clock sites, then quadratically calibrated.",
"platform": [
"RRBS"
],
"population": "mice",
"postprocess": "stubbs",
"predicts": [
"chronological age"
],
"preprocess": "quantile_normalization_and_scale_with_gold_standard",
"reference_values": true,
"research_only": null,
"species": "Mus musculus",
"tissue": [
"multi-tissue",
"liver",
"lung",
"heart",
"brain cortex",
"skeletal muscle",
"cerebellum",
"spleen"
],
"training_target": [
"chronological age"
],
"unit": [
"months"
],
"version": "0.5.7",
"year": 2017
}