Image Classification
timm
English
medical-imaging
knee-mri
acl-tear-detection
deep-learning
convnext
self-attention
masked-slice-modeling
radiology
orthopedics
Eval Results (legacy)
Instructions to use shareefch1413/ACL-LKNet with libraries, inference providers, notebooks, and local apps. Follow these links to get started.
- Libraries
- timm
How to use shareefch1413/ACL-LKNet with timm:
import timm model = timm.create_model("hf-hub:shareefch1413/ACL-LKNet", pretrained=True) - Notebooks
- Google Colab
- Kaggle
File size: 8,676 Bytes
00801a0 | 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235 236 237 238 239 240 241 242 243 244 245 246 247 248 | """
Utility functions for ACL-LKNet.
Includes: reproducibility seeding, EMA model, checkpoint save/load,
logging helpers, and Google Drive integration.
"""
import os
import copy
import random
import logging
from typing import Dict, Any, Optional
import numpy as np
import torch
import torch.nn as nn
# ββ Reproducibility βββββββββββββββββββββββββββββββββββββββββββββββββ
def set_seed(seed: int = 42):
"""Set all random seeds for reproducibility."""
random.seed(seed)
np.random.seed(seed)
torch.manual_seed(seed)
torch.cuda.manual_seed_all(seed)
torch.backends.cudnn.deterministic = True
torch.backends.cudnn.benchmark = False
os.environ["PYTHONHASHSEED"] = str(seed)
def get_rng_states() -> Dict[str, Any]:
"""Capture all RNG states for exact checkpoint reproducibility."""
states = {
"python": random.getstate(),
"numpy": np.random.get_state(),
"torch": torch.get_rng_state(),
}
if torch.cuda.is_available():
states["cuda"] = torch.cuda.get_rng_state_all()
return states
def set_rng_states(states: Dict[str, Any]):
"""Restore RNG states from checkpoint."""
random.setstate(states["python"])
np.random.set_state(states["numpy"])
torch.set_rng_state(states["torch"])
if "cuda" in states and torch.cuda.is_available():
torch.cuda.set_rng_state_all(states["cuda"])
# ββ Exponential Moving Average ββββββββββββββββββββββββββββββββββββββ
class EMAModel:
"""
Exponential Moving Average of model parameters.
Maintains a shadow copy of model weights that is updated as:
shadow = decay * shadow + (1 - decay) * current
Use the EMA model for evaluation β it typically generalizes better.
"""
def __init__(self, model: nn.Module, decay: float = 0.999):
self.decay = decay
self.shadow = copy.deepcopy(model)
self.shadow.eval()
for p in self.shadow.parameters():
p.requires_grad_(False)
@torch.no_grad()
def update(self, model: nn.Module):
"""Update shadow weights with current model weights and buffers."""
for s_param, m_param in zip(self.shadow.parameters(), model.parameters()):
s_param.data.mul_(self.decay).add_(m_param.data, alpha=1.0 - self.decay)
# Sync BatchNorm running statistics (buffers are not EMA-averaged,
# they should directly mirror the training model's batch statistics)
for s_buf, m_buf in zip(self.shadow.buffers(), model.buffers()):
s_buf.data.copy_(m_buf.data)
def state_dict(self):
return self.shadow.state_dict()
def load_state_dict(self, state_dict):
self.shadow.load_state_dict(state_dict)
def eval_model(self) -> nn.Module:
"""Return the shadow model for evaluation."""
return self.shadow
# ββ Checkpoint Management βββββββββββββββββββββββββββββββββββββββββββ
def save_checkpoint(
path: str,
epoch: int,
phase: str,
model: nn.Module,
optimizer: torch.optim.Optimizer,
scheduler: Any,
scaler: Optional[torch.amp.GradScaler],
ema: Optional[EMAModel],
best_metric: float,
best_epoch: int,
train_history: list,
val_history: list,
patience_counter: int,
config: Any,
):
"""
Save a full training checkpoint to Google Drive.
Captures everything needed to resume training exactly:
model, optimizer, scheduler, AMP scaler, EMA, RNG states, histories.
"""
os.makedirs(os.path.dirname(path), exist_ok=True)
checkpoint = {
"epoch": epoch,
"phase": phase,
"model_state_dict": model.state_dict(),
"optimizer_state_dict": optimizer.state_dict(),
"scheduler_state_dict": scheduler.state_dict() if scheduler else None,
"scaler_state_dict": scaler.state_dict() if scaler else None,
"ema_state_dict": ema.state_dict() if ema else None,
"best_metric": best_metric,
"best_epoch": best_epoch,
"train_history": train_history,
"val_history": val_history,
"patience_counter": patience_counter,
"rng_states": get_rng_states(),
"config": config.to_dict() if hasattr(config, "to_dict") else str(config),
}
torch.save(checkpoint, path)
logging.info(f"Checkpoint saved: {path}")
def load_checkpoint(
path: str,
model: nn.Module,
optimizer: Optional[torch.optim.Optimizer] = None,
scheduler: Any = None,
scaler: Optional[torch.amp.GradScaler] = None,
ema: Optional[EMAModel] = None,
) -> Dict[str, Any]:
"""
Load a checkpoint and restore all training state.
Returns the checkpoint dict for extracting histories, epoch, etc.
"""
checkpoint = torch.load(path, map_location="cpu", weights_only=False)
model.load_state_dict(checkpoint["model_state_dict"])
if optimizer and "optimizer_state_dict" in checkpoint:
optimizer.load_state_dict(checkpoint["optimizer_state_dict"])
if scheduler and checkpoint.get("scheduler_state_dict"):
scheduler.load_state_dict(checkpoint["scheduler_state_dict"])
if scaler and checkpoint.get("scaler_state_dict"):
scaler.load_state_dict(checkpoint["scaler_state_dict"])
if ema and checkpoint.get("ema_state_dict"):
ema.load_state_dict(checkpoint["ema_state_dict"])
if "rng_states" in checkpoint:
set_rng_states(checkpoint["rng_states"])
logging.info(f"Checkpoint loaded: {path} (epoch {checkpoint['epoch']})")
return checkpoint
def find_latest_checkpoint(checkpoint_dir: str, phase: str = "finetune") -> Optional[str]:
"""Find the latest checkpoint file in the checkpoint directory."""
if not os.path.exists(checkpoint_dir):
return None
checkpoints = [
f for f in os.listdir(checkpoint_dir)
if f.startswith(f"{phase}_") and f.endswith(".pt")
]
if not checkpoints:
return None
# Sort by epoch number
def extract_epoch(fname):
try:
parts = fname.replace(".pt", "").split("_epoch")
return int(parts[-1])
except (ValueError, IndexError):
return -1
checkpoints.sort(key=extract_epoch)
return os.path.join(checkpoint_dir, checkpoints[-1])
# ββ Logging βββββββββββββββββββββββββββββββββββββββββββββββββββββββββ
def setup_logging(log_dir: Optional[str] = None, level=logging.INFO):
"""Configure logging to console and optionally to file."""
handlers = [logging.StreamHandler()]
if log_dir:
os.makedirs(log_dir, exist_ok=True)
handlers.append(logging.FileHandler(os.path.join(log_dir, "training.log")))
logging.basicConfig(
level=level,
format="%(asctime)s [%(levelname)s] %(message)s",
datefmt="%Y-%m-%d %H:%M:%S",
handlers=handlers,
force=True,
)
# ββ Metrics Formatting βββββββββββββββββββββββββββββββββββββββββββββ
def format_metrics(metrics: Dict[str, float]) -> str:
"""Format a metrics dict into a readable string."""
parts = []
for k, v in metrics.items():
if isinstance(v, float):
parts.append(f"{k}: {v:.4f}")
else:
parts.append(f"{k}: {v}")
return " | ".join(parts)
# ββ Memory Utils ββββββββββββββββββββββββββββββββββββββββββββββββββββ
def get_gpu_memory_info() -> Dict[str, float]:
"""Get GPU memory usage in MB."""
if not torch.cuda.is_available():
return {"allocated_mb": 0, "reserved_mb": 0, "total_mb": 0}
try:
props = torch.cuda.get_device_properties(0)
total = getattr(props, "total_memory", getattr(props, "total_mem", 0)) / 1024**2
return {
"allocated_mb": torch.cuda.memory_allocated() / 1024**2,
"reserved_mb": torch.cuda.memory_reserved() / 1024**2,
"total_mb": total,
}
except Exception:
return {"allocated_mb": 0, "reserved_mb": 0, "total_mb": 0}
def clear_gpu_memory():
"""Force GPU memory cleanup."""
if torch.cuda.is_available():
torch.cuda.empty_cache()
torch.cuda.synchronize()
|