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Add CI, typed ORM models, and packaging cleanup
Aryan MishraIntroduce repo-wide engineering guardrails with GitHub Actions CI (ruff, mypy, bandit, pytest), pre-commit hooks, editor config, and contributor/security docs. Refactor API persistence models into `api/models` with SQLAlchemy 2.0 typed mappings, wire imports accordingly, and align project packaging/test execution by adding `py.typed` markers, pytest pythonpath config, and Makefile/docs updates that remove ad-hoc `PYTHONPATH` usage. This also cleans generated artifacts from git, updates notebook/script paths to src-layout module execution, and refreshes project structure documentation.a00fee9