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d3ce322
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1 Parent(s): 85b3f64

Update catalog for submissions/external_reference_smoke_20260727_v1.yaml

Browse files
Files changed (2) hide show
  1. catalog.json +62 -1
  2. release_summary.json +4 -5
catalog.json CHANGED
@@ -293,6 +293,67 @@
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  "source_revision": "326b257a20e73df337ece40bb82401e277851f5b",
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  "zero_vectors": 0
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  },
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
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  {
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  "algorithm": "FRoGS ARCHS4 gene embedding",
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  "category": "Functional Genomics",
@@ -530,7 +591,7 @@
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  "category": "Protein",
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  "category_source": "community_submission",
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  "community_contribution": true,
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- "contributor_affiliation": "ETH Zürich",
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  "contributor_hf_username": "thecosmicboy",
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  "contributor_name": "Daniel Tabares",
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  "coverage_pct": 7.5,
 
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  "source_revision": "326b257a20e73df337ece40bb82401e277851f5b",
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  "zero_vectors": 0
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  },
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+ {
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+ "algorithm": "deterministic Gaussian fixture",
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+ "availability_status": "available_at_acceptance",
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+ "category": "other",
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+ "category_source": "community_submission",
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+ "community_contribution": true,
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+ "contributor_affiliation": "ETH",
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+ "contributor_name": "Daniel Tabares",
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+ "coverage_pct": 7.5,
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+ "dataset_path": "candidate_embedding",
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+ "description": "Deterministic synthetic float32 vectors for 1,500 human Ensembl gene IDs, created solely to verify the automatic contribution, validation, registration, and external-reference publication workflow.",
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+ "id": "external_reference_smoke_20260727_v1",
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+ "license": "cc0-1.0",
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+ "metadata_url": "https://huggingface.co/datasets/danieltslz/gene-embeddings-external-reference-smoke/blob/098258908de86982d2ced04e70f1353e46055d08/candidate_embedding/metadata.json",
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+ "modality": "synthetic external-reference pipeline smoke test",
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+ "n_dims": 16,
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+ "n_genes": 1500,
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+ "name": "External Reference Smoke Test 2026-07-27",
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+ "package_url": "https://huggingface.co/datasets/danieltslz/gene-embeddings-external-reference-smoke/tree/098258908de86982d2ced04e70f1353e46055d08/candidate_embedding",
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+ "qc_status": "AUTO_PASS",
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+ "source_dataset": "danieltslz/gene-embeddings-external-reference-smoke",
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+ "source_repo_type": "dataset",
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+ "source_revision": "098258908de86982d2ced04e70f1353e46055d08",
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+ "storage_mode": "external_reference",
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+ "trace": [
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+ 0.424897,
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+ 0.0,
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+ 1.0,
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+ 0.044766,
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+ 0.719459,
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+ 0.813992,
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+ 0.319309,
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+ 0.473156,
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+ 0.761471,
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+ 0.535774,
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+ 0.274129,
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+ 0.555382,
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+ 0.573005,
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+ 0.786742,
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+ 0.576876,
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+ 0.088022,
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+ 0.569755,
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+ 0.569755,
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+ 0.569755,
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+ 0.569755,
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+ 0.569755,
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+ 0.569755,
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+ 0.569755,
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+ 0.569755,
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+ 0.569755,
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+ 0.569755,
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+ 0.569755,
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+ 0.569755,
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+ 0.569755,
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+ 0.569755,
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+ 0.569755,
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+ 0.569755
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+ ],
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+ "trace_gene": "ENSG00000000003",
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+ "validation_path": "data/community_contributions/external_reference_smoke_20260727_v1"
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+ },
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  {
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  "algorithm": "FRoGS ARCHS4 gene embedding",
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  "category": "Functional Genomics",
 
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  "category": "Protein",
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  "category_source": "community_submission",
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  "community_contribution": true,
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+ "contributor_affiliation": "ETH Z\u00fcrich",
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  "contributor_hf_username": "thecosmicboy",
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  "contributor_name": "Daniel Tabares",
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  "coverage_pct": 7.5,
release_summary.json CHANGED
@@ -1,7 +1,6 @@
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  {
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- "catalog_count": 72,
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- "community_catalog_count": 4,
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- "community_registry_count": 4,
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- "latest_embedding_id": "hf_portal_root_upload_smoke_20260729_1328_v1",
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- "latest_hf_pr_number": 8
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  }
 
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  {
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+ "catalog_count": 70,
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+ "community_catalog_count": 2,
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+ "community_registry_count": 2,
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+ "latest_embedding_id": "external_reference_smoke_20260727_v1"
 
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  }