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2 days ago
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Fix indel region annotation across changed spans and insertion flanks
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docs: document 16k window default + indel baseline caveat
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docs: note 16k window + indel-score caveat in app Documentation tab
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perf: default CONTEXT_LEN to 16k (~2.5x faster CPU inference; NTV3_CONTEXT_LEN overrides)
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feat: make CONTEXT_LEN env-configurable via NTV3_CONTEXT_LEN (default 32k)
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perf(app): full-output cache — cached example clicks return in ~50ms (vs ~10s)
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fix(app): pre-warm example cache in background thread (was hitting startup timeout)
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perf(app): pre-warm lru_cache for built-in examples at startup
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perf(app): lru_cache on per-variant inference — example clicks now instant after first run
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deps: add py2bit for hg38.2bit support
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feat(spaces): fast hg38.2bit local lookup with auto-download from HF dataset
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fix(spaces): use Ensembl REST as fallback for human (HF egress blocks UCSC)
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ux: show explicit error when sequence fetch fails
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debug: log UCSC/Ensembl fetch failures + surface them in UI
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fix(spaces): defensive monkey-patch for gradio_client schema bool bug (No API found)
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fix(spaces): bump gradio sdk_version to 6.13.0 + correct suggested_hardware key
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Pin huggingface_hub<1.0 (HfFolder removed in 1.0)
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Add audioop-lts for Python 3.13 (pydub/gradio compat)
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Initial deploy: MAGI variant interpreter (gradio_app)
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initial commit
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