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update knowledge graph download URL
Browse files- ProtHGT_app.py +1 -1
- run_prothgt_app.py +1 -1
ProtHGT_app.py
CHANGED
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@@ -24,7 +24,7 @@ from ui import GITHUB_URL, KG_VIEW_GUIDE, STRICTNESS, render_header, render_step
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MAX_PROTEINS = 100
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MAX_KG_VIZ_PROTEINS = 10
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SEARCH_LIMIT = 50
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-
KG_DOWNLOAD_URL = "https://huggingface.co/datasets/HUBioDataLab/ProtHGT/blob/main/knowledge_graphs/prothgt-kg.pt"
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ASPECTS = {
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"GO_term_F": ("Molecular function", "What the protein does at the molecular level, e.g. binding or catalysis."),
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MAX_PROTEINS = 100
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MAX_KG_VIZ_PROTEINS = 10
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SEARCH_LIMIT = 50
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+
KG_DOWNLOAD_URL = "https://huggingface.co/datasets/HUBioDataLab/ProtHGT/blob/main/knowledge_graphs/go/prothgt-kg.pt"
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ASPECTS = {
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"GO_term_F": ("Molecular function", "What the protein does at the molecular level, e.g. binding or catalysis."),
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run_prothgt_app.py
CHANGED
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@@ -86,7 +86,7 @@ def load_kg(output=KG_PATH):
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try:
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cached_path = hf_hub_download(
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repo_id="HUBioDataLab/ProtHGT",
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filename="knowledge_graphs/prothgt-kg.pt",
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repo_type="dataset",
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)
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os.makedirs(os.path.dirname(output), exist_ok=True)
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try:
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cached_path = hf_hub_download(
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repo_id="HUBioDataLab/ProtHGT",
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+
filename="knowledge_graphs/go/prothgt-kg.pt",
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repo_type="dataset",
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)
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os.makedirs(os.path.dirname(output), exist_ok=True)
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