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Upload folder using huggingface_hub
Browse files- database.py +38 -6
- main.py +15 -0
- requirements.txt +1 -0
database.py
CHANGED
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@@ -1,10 +1,44 @@
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import sqlite3
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import os
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from datetime import datetime
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def init_db():
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conn = sqlite3.connect(DB_PATH)
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cursor = conn.cursor()
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cursor.execute('''
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@@ -43,23 +77,21 @@ def log_prediction(data, prediction_label, confidence):
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))
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conn.commit()
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conn.close()
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def get_history():
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conn = sqlite3.connect(DB_PATH)
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cursor = conn.cursor()
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cursor.execute('SELECT * FROM predictions ORDER BY timestamp DESC LIMIT 100')
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rows = cursor.fetchall()
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# Get column names
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col_names = [description[0] for description in cursor.description]
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conn.close()
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# Format as list of dicts
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history = []
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for row in rows:
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history.append(dict(zip(col_names, row)))
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-
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return history
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# Initialize db when this module is loaded
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import sqlite3
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import os
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from datetime import datetime
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from huggingface_hub import HfApi, hf_hub_download
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REPO_ID = "IDKHowToCodeFr/tinyml-logs"
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DB_NAME = 'patient_history.db'
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DB_PATH = os.path.join(os.path.dirname(os.path.abspath(__file__)), DB_NAME)
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HF_TOKEN = os.getenv("HF_TOKEN")
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api = HfApi()
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def sync_from_hub():
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if not HF_TOKEN:
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print("No HF_TOKEN found. Skipping sync.")
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return
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try:
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print(f"Downloading {DB_NAME} from Hub...")
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path = hf_hub_download(repo_id=REPO_ID, filename=DB_NAME, repo_type="dataset", token=HF_TOKEN)
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import shutil
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shutil.copy(path, DB_PATH)
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print("Sync from Hub complete.")
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except Exception as e:
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print(f"Sync from Hub failed (maybe first run?): {e}")
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def sync_to_hub():
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if not HF_TOKEN:
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return
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try:
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api.upload_file(
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path_or_fileobj=DB_PATH,
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path_in_repo=DB_NAME,
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repo_id=REPO_ID,
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repo_type="dataset",
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token=HF_TOKEN
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)
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except Exception as e:
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print(f"Sync to Hub failed: {e}")
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def init_db():
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sync_from_hub()
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conn = sqlite3.connect(DB_PATH)
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cursor = conn.cursor()
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cursor.execute('''
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))
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conn.commit()
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conn.close()
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sync_to_hub()
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def get_history():
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if not os.path.exists(DB_PATH):
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return []
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conn = sqlite3.connect(DB_PATH)
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cursor = conn.cursor()
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cursor.execute('SELECT * FROM predictions ORDER BY timestamp DESC LIMIT 100')
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rows = cursor.fetchall()
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col_names = [description[0] for description in cursor.description]
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conn.close()
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history = []
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for row in rows:
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history.append(dict(zip(col_names, row)))
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return history
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# Initialize db when this module is loaded
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main.py
CHANGED
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@@ -99,6 +99,21 @@ async def predict(data: PatientData):
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def history():
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return get_history()
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@app.post("/explain")
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async def explain(data: PatientData):
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eng = get_ensemble()
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def history():
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return get_history()
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@app.get("/dataset")
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async def get_dataset():
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data_path = '/app/data/patient_dataset.csv' if os.path.exists('/app/data') else '../data/patient_dataset.csv' if os.path.exists('../data') else 'data/patient_dataset.csv'
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if os.path.exists(data_path):
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df = pd.read_csv(data_path)
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# Return summary or partial data to avoid huge payloads
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return df.to_dict(orient="records")
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return {"error": "Dataset not found"}
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@app.get("/sync")
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def force_sync():
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from database import sync_from_hub, sync_to_hub
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sync_from_hub()
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return {"status": "Sync attempted"}
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@app.post("/explain")
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async def explain(data: PatientData):
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eng = get_ensemble()
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requirements.txt
CHANGED
|
@@ -8,3 +8,4 @@ shap
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m2cgen
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matplotlib
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python-multipart
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m2cgen
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matplotlib
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python-multipart
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+
huggingface_hub
|