|
|
|
|
|
|
|
|
|
|
|
|
| import cv2
|
|
|
| from segment_anything import SamAutomaticMaskGenerator, sam_model_registry
|
|
|
| import argparse
|
| import json
|
| import os
|
| from typing import Any, Dict, List
|
|
|
| parser = argparse.ArgumentParser(
|
| description=(
|
| "Runs automatic mask generation on an input image or directory of images, "
|
| "and outputs masks as either PNGs or COCO-style RLEs. Requires open-cv, "
|
| "as well as pycocotools if saving in RLE format."
|
| )
|
| )
|
|
|
| parser.add_argument(
|
| "--input",
|
| type=str,
|
| required=True,
|
| help="Path to either a single input image or folder of images.",
|
| )
|
|
|
| parser.add_argument(
|
| "--output",
|
| type=str,
|
| required=True,
|
| help=(
|
| "Path to the directory where masks will be output. Output will be either a folder "
|
| "of PNGs per image or a single json with COCO-style masks."
|
| ),
|
| )
|
|
|
| parser.add_argument(
|
| "--model-type",
|
| type=str,
|
| required=True,
|
| help="The type of model to load, in ['default', 'vit_h', 'vit_l', 'vit_b']",
|
| )
|
|
|
| parser.add_argument(
|
| "--checkpoint",
|
| type=str,
|
| required=True,
|
| help="The path to the SAM checkpoint to use for mask generation.",
|
| )
|
|
|
| parser.add_argument("--device", type=str, default="cuda", help="The device to run generation on.")
|
|
|
| parser.add_argument(
|
| "--convert-to-rle",
|
| action="store_true",
|
| help=(
|
| "Save masks as COCO RLEs in a single json instead of as a folder of PNGs. "
|
| "Requires pycocotools."
|
| ),
|
| )
|
|
|
| amg_settings = parser.add_argument_group("AMG Settings")
|
|
|
| amg_settings.add_argument(
|
| "--points-per-side",
|
| type=int,
|
| default=None,
|
| help="Generate masks by sampling a grid over the image with this many points to a side.",
|
| )
|
|
|
| amg_settings.add_argument(
|
| "--points-per-batch",
|
| type=int,
|
| default=None,
|
| help="How many input points to process simultaneously in one batch.",
|
| )
|
|
|
| amg_settings.add_argument(
|
| "--pred-iou-thresh",
|
| type=float,
|
| default=None,
|
| help="Exclude masks with a predicted score from the model that is lower than this threshold.",
|
| )
|
|
|
| amg_settings.add_argument(
|
| "--stability-score-thresh",
|
| type=float,
|
| default=None,
|
| help="Exclude masks with a stability score lower than this threshold.",
|
| )
|
|
|
| amg_settings.add_argument(
|
| "--stability-score-offset",
|
| type=float,
|
| default=None,
|
| help="Larger values perturb the mask more when measuring stability score.",
|
| )
|
|
|
| amg_settings.add_argument(
|
| "--box-nms-thresh",
|
| type=float,
|
| default=None,
|
| help="The overlap threshold for excluding a duplicate mask.",
|
| )
|
|
|
| amg_settings.add_argument(
|
| "--crop-n-layers",
|
| type=int,
|
| default=None,
|
| help=(
|
| "If >0, mask generation is run on smaller crops of the image to generate more masks. "
|
| "The value sets how many different scales to crop at."
|
| ),
|
| )
|
|
|
| amg_settings.add_argument(
|
| "--crop-nms-thresh",
|
| type=float,
|
| default=None,
|
| help="The overlap threshold for excluding duplicate masks across different crops.",
|
| )
|
|
|
| amg_settings.add_argument(
|
| "--crop-overlap-ratio",
|
| type=int,
|
| default=None,
|
| help="Larger numbers mean image crops will overlap more.",
|
| )
|
|
|
| amg_settings.add_argument(
|
| "--crop-n-points-downscale-factor",
|
| type=int,
|
| default=None,
|
| help="The number of points-per-side in each layer of crop is reduced by this factor.",
|
| )
|
|
|
| amg_settings.add_argument(
|
| "--min-mask-region-area",
|
| type=int,
|
| default=None,
|
| help=(
|
| "Disconnected mask regions or holes with area smaller than this value "
|
| "in pixels are removed by postprocessing."
|
| ),
|
| )
|
|
|
|
|
| def write_masks_to_folder(masks: List[Dict[str, Any]], path: str) -> None:
|
| header = "id,area,bbox_x0,bbox_y0,bbox_w,bbox_h,point_input_x,point_input_y,predicted_iou,stability_score,crop_box_x0,crop_box_y0,crop_box_w,crop_box_h"
|
| metadata = [header]
|
| for i, mask_data in enumerate(masks):
|
| mask = mask_data["segmentation"]
|
| filename = f"{i}.png"
|
| cv2.imwrite(os.path.join(path, filename), mask * 255)
|
| mask_metadata = [
|
| str(i),
|
| str(mask_data["area"]),
|
| *[str(x) for x in mask_data["bbox"]],
|
| *[str(x) for x in mask_data["point_coords"][0]],
|
| str(mask_data["predicted_iou"]),
|
| str(mask_data["stability_score"]),
|
| *[str(x) for x in mask_data["crop_box"]],
|
| ]
|
| row = ",".join(mask_metadata)
|
| metadata.append(row)
|
| metadata_path = os.path.join(path, "metadata.csv")
|
| with open(metadata_path, "w") as f:
|
| f.write("\n".join(metadata))
|
|
|
| return
|
|
|
|
|
| def get_amg_kwargs(args):
|
| amg_kwargs = {
|
| "points_per_side": args.points_per_side,
|
| "points_per_batch": args.points_per_batch,
|
| "pred_iou_thresh": args.pred_iou_thresh,
|
| "stability_score_thresh": args.stability_score_thresh,
|
| "stability_score_offset": args.stability_score_offset,
|
| "box_nms_thresh": args.box_nms_thresh,
|
| "crop_n_layers": args.crop_n_layers,
|
| "crop_nms_thresh": args.crop_nms_thresh,
|
| "crop_overlap_ratio": args.crop_overlap_ratio,
|
| "crop_n_points_downscale_factor": args.crop_n_points_downscale_factor,
|
| "min_mask_region_area": args.min_mask_region_area,
|
| }
|
| amg_kwargs = {k: v for k, v in amg_kwargs.items() if v is not None}
|
| return amg_kwargs
|
|
|
|
|
| def main(args: argparse.Namespace) -> None:
|
| print("Loading model...")
|
| sam = sam_model_registry[args.model_type](checkpoint=args.checkpoint)
|
| _ = sam.to(device=args.device)
|
| output_mode = "coco_rle" if args.convert_to_rle else "binary_mask"
|
| amg_kwargs = get_amg_kwargs(args)
|
| generator = SamAutomaticMaskGenerator(sam, output_mode=output_mode, **amg_kwargs)
|
|
|
| if not os.path.isdir(args.input):
|
| targets = [args.input]
|
| else:
|
| targets = [
|
| f for f in os.listdir(args.input) if not os.path.isdir(os.path.join(args.input, f))
|
| ]
|
| targets = [os.path.join(args.input, f) for f in targets]
|
|
|
| os.makedirs(args.output, exist_ok=True)
|
|
|
| for t in targets:
|
| print(f"Processing '{t}'...")
|
| image = cv2.imread(t)
|
| if image is None:
|
| print(f"Could not load '{t}' as an image, skipping...")
|
| continue
|
| image = cv2.cvtColor(image, cv2.COLOR_BGR2RGB)
|
|
|
| masks = generator.generate(image)
|
|
|
| base = os.path.basename(t)
|
| base = os.path.splitext(base)[0]
|
| save_base = os.path.join(args.output, base)
|
| if output_mode == "binary_mask":
|
| os.makedirs(save_base, exist_ok=False)
|
| write_masks_to_folder(masks, save_base)
|
| else:
|
| save_file = save_base + ".json"
|
| with open(save_file, "w") as f:
|
| json.dump(masks, f)
|
| print("Done!")
|
|
|
|
|
| if __name__ == "__main__":
|
| args = parser.parse_args()
|
| main(args)
|
|
|