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RxnIM

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  1. Fix mask dimensions: unsqueeze 3D->4D for OpenNMT-py 3.x attention

    L3ul
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    18b6dbd

  2. Fix layer_cache format: convert between old dict and OpenNMT-py 3.x (bool, dict) tuple

    L3ul
    Verified signature
    1d66007

  3. Patch decoder.py for OpenNMT-py 3.x: layer_cache/attn_type as instance attrs

    L3ul
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    20b1d85

  4. Add error handling to process_chem_image for debugging

    L3ul
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    1f4d8b3

  5. Re-add share=True for Gradio 4.x localhost check bypass

    L3ul
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    0102396

  6. Add NO_PROXY env + share=True for Gradio Docker localhost check

    L3ul
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    3914d72

  7. app.py: remove share=True, simplified for Gradio 4.x

    L3ul
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    bec2698

  8. Downgrade Gradio 5.12->4.44.1 to fix API schema bug + remove @gr .render

    L3ul
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    cb100c5

  9. Remove @gr .render to fix API schema, return SMILES as string

    L3ul
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    c21c04f

  1. Fix: share=True to bypass Gradio localhost check in Docker

    L3ul
    Verified signature
    9c6dfc6

  2. Add SPACE_ID env var to fix Gradio localhost check in Docker

    L3ul
    Verified signature
    bee7e14

  3. Fix Gradio launch for Docker: explicit server_name=0.0.0.0

    L3ul
    Verified signature
    b34306e

  4. Pin timm==0.4.12 (original version with overlay_external_default_cfg)

    L3ul
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    e6e0369

  5. Pin timm==0.6.13 for overlay_external_default_cfg compatibility

    L3ul
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    a30e684

  6. Fix corrupted augment.py — use patched version with inlined functions

    L3ul
    Verified signature
    ad8fab9

  7. Pin transformers<5.0 for torch<2.3 compatibility

    L3ul
    Verified signature
    9225ece

  8. Fix apt package names for Debian bookworm (libgl1, libgdk-pixbuf-2.0-0)

    L3ul
    Verified signature
    68804b9

  9. Restore original augment.py (works on Python 3.11)

    L3ul
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    85a46d6

  10. Switch to Docker SDK with Python 3.11 for full compatibility

    L3ul
    Verified signature
    076be8c

  11. Switch to Docker SDK with Python 3.11 for full compatibility

    L3ul
    Verified signature
    c423155

  12. Switch to Docker SDK with Python 3.11 for full compatibility

    L3ul
    Verified signature
    5b0f3f7

  13. Fix remaining albumentations API calls: pad_with_params->cv2.copyMakeBorder, remove unused training classes

    L3ul
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    f8c9ad1

  14. Relax albumentations pin (patched augment.py handles compatibility)

    L3ul
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    7e7f0a8

  15. Patch molscribe/augment.py: inline albumentations internal functions removed in newer versions

    L3ul
    Verified signature
    d430fe1

  16. Pin albumentations==1.3.1 for safe_rotate_enlarged_img_size

    L3ul
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    64e1b2d

  17. Pin albumentations<2.0 for molscribe compatibility

    L3ul
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    b0f742a

  18. Fix rdkit-pypi -> rdkit for Python 3.13 compatibility

    L3ul
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    cc232a2

  19. Upload 3 files

    L3ul
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    ca58568

  1. Update app.py

    CYF200127
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    63387a5

  1. Update rxn/reaction/interface.py

    CYF200127
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    89d50ec

  1. Update app.py

    CYF200127
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    ab71a14

  2. Update app.py

    CYF200127
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    c30d3d7

  1. Update app.py

    CYF200127
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    821e965

  1. Update requirements.txt

    CYF200127
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    842c84b

  2. Update app.py

    CYF200127
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    5abbfef

  1. Update app.py

    CYF200127
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    2df1e99

  2. Update app.py

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    2551c79

  1. Update app.py

    CYF200127
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    bdc1ebc

  2. Update app.py

    CYF200127
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    0d61df1

  1. Update app.py

    CYF200127
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    abf748b

  1. Upload rdkit.png

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    99328f3

  2. Update requirements.txt

    CYF200127
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    d76b0e8

  3. Update app.py

    CYF200127
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    32c244d

  1. Update getReaction.py

    CYF200127
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    3dbdaf8

  2. Update app.py

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    b291e50

  3. Update app.py

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    558de77

  4. Update app.py

    CYF200127
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    d35cb85

  5. Update app.py

    CYF200127
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    238966a

  6. Update getReaction.py

    CYF200127
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    72bdfff

  1. Update app.py

    CYF200127
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    da428e0