Create Dockerfile

Dockerfile

@@ -0,0 +1,213 @@
+#!/bin/bash
+
+# ==================================================================
+# Initial setup
+# ------------------------------------------------------------------
+
+    # Ubuntu 20.04 as base image
+    FROM ubuntu:20.04
+    RUN yes| unminimize
+
+    # Set ENV variables
+    ENV LANG C.UTF-8
+    ENV SHELL=/bin/bash
+    ENV DEBIAN_FRONTEND=noninteractive
+
+    ENV APT_INSTALL="apt-get install -y --no-install-recommends"
+    ENV PIP_INSTALL="python3 -m pip --no-cache-dir install --upgrade"
+    ENV GIT_CLONE="git clone --depth 10"
+
+
+# ==================================================================
+# Tools
+# ------------------------------------------------------------------
+
+    RUN apt-get update && \
+        $APT_INSTALL \
+        apt-utils \
+        gcc \
+        make \
+        pkg-config \
+        apt-transport-https \
+        build-essential \
+        ca-certificates \
+        wget \
+        rsync \
+        git \
+        vim \
+        mlocate \
+        libssl-dev \
+        curl \
+        openssh-client \
+        unzip \
+        unrar \
+        zip \
+        csvkit \
+        emacs \
+        joe \
+        jq \
+        dialog \
+        man-db \
+        manpages \
+        manpages-dev \
+        manpages-posix \
+        manpages-posix-dev \
+        nano \
+        iputils-ping \
+        sudo \
+        ffmpeg \
+        libsm6 \
+        libxext6 \
+        libboost-all-dev \
+        cifs-utils \
+        software-properties-common
+
+
+# ==================================================================
+# Python
+# ------------------------------------------------------------------
+
+    #Based on https://launchpad.net/~deadsnakes/+archive/ubuntu/ppa
+
+    # Adding repository for python3.11
+    RUN add-apt-repository ppa:deadsnakes/ppa -y && \
+
+    # Installing python3.11
+        $APT_INSTALL \
+        python3.11 \
+        python3.11-dev \
+        python3.11-venv \
+        python3-distutils-extra
+
+    # Add symlink so python and python3 commands use same python3.9 executable
+    RUN ln -s /usr/bin/python3.11 /usr/local/bin/python3 && \
+        ln -s /usr/bin/python3.11 /usr/local/bin/python
+
+    # Installing pip
+    RUN curl -sS https://bootstrap.pypa.io/get-pip.py | python3.11
+    ENV PATH=$PATH:/root/.local/bin
+
+
+# ==================================================================
+# PyTorch
+# ------------------------------------------------------------------
+
+    # Based on https://pytorch.org/get-started/locally/
+
+    RUN $PIP_INSTALL torch torchvision torchaudio torchtext && \
+        
+
+# ==================================================================
+# TensorFlow
+# ------------------------------------------------------------------
+
+    # Based on https://www.tensorflow.org/install/pip
+
+    $PIP_INSTALL tensorflow && \
+
+
+# ==================================================================
+# Hugging Face
+# ------------------------------------------------------------------
+    
+    # Based on https://huggingface.co/docs/transformers/installation
+    # Based on https://huggingface.co/docs/datasets/installation
+
+    $PIP_INSTALL datasets && \
+
+
+# ==================================================================
+# JupyterLab
+# ------------------------------------------------------------------
+
+    # Based on https://jupyterlab.readthedocs.io/en/stable/getting_started/installation.html#pip
+
+    $PIP_INSTALL jupyterlab==3.4.6 && \
+
+
+# ==================================================================
+# Additional Python Packages
+# ------------------------------------------------------------------
+
+    $PIP_INSTALL \
+        numpy==1.23.4 \
+        scipy==1.9.2 \
+        pandas==1.5.0 \
+        cloudpickle==2.2.0 \
+        scikit-image \
+        matplotlib==3.6.1 \
+        ipython==8.5.0 \
+        ipykernel==6.16.0 \
+        ipywidgets==8.0.2 \
+        cython==0.29.32 \
+        tqdm==4.64.1 \
+        gdown \
+        xgboost==1.6.2 \
+        pillow==9.2.0 \
+        seaborn==0.12.0 \
+        sqlalchemy==1.4.41 \
+        spacy==3.4.1 \
+        nltk==3.7 \
+        boto3==1.24.90 \
+        tabulate==0.9.0 \
+        future==0.18.2 \
+        gradient==2.0.6 \
+        jsonify==0.5 \
+        opencv-python==4.6.0.66 \
+        sentence-transformers==2.2.2 \
+        wandb==0.13.4 \
+        awscli==1.25.91 \
+        jupyterlab-snippets==0.4.1 \
+        tornado==6.1
+# ==================================================================
+# Installing transformers & scikit image (fixed)
+# ------------------------------------------------------------------
+    RUN pip install -U git+https://github.com/huggingface/transformers
+
+    RUN pip install --pre scikit-learn
+# ==================================================================
+# Installing JRE and JDK
+# ------------------------------------------------------------------
+
+    RUN $APT_INSTALL \
+        default-jre \
+        default-jdk
+
+
+# ==================================================================
+# CMake
+# ------------------------------------------------------------------
+
+    RUN $GIT_CLONE https://github.com/Kitware/CMake ~/cmake && \
+        cd ~/cmake && \
+        ./bootstrap && \
+        make -j"$(nproc)" install
+
+
+# ==================================================================
+# Node.js and Jupyter Notebook Extensions
+# ------------------------------------------------------------------
+
+    RUN curl -sL https://deb.nodesource.com/setup_16.x | bash  && \
+        $APT_INSTALL nodejs  && \
+        $PIP_INSTALL jupyter_contrib_nbextensions jupyterlab-git && \
+        jupyter contrib nbextension install --user
+                
+
+# ==================================================================
+# Startup
+# ------------------------------------------------------------------
+
+    EXPOSE 8888 6006
+
+    CMD jupyter-lab \
+    --ip 0.0.0.0 \
+    --port 7860 \
+    --no-browser \
+    --allow-root \
+    --ServerApp.token="$JUPYTER_TOKEN" \
+    --ServerApp.tornado_settings="{'headers': {'Content-Security-Policy': 'frame-ancestors *'}}" \
+    --ServerApp.cookie_options="{'SameSite': 'None', 'Secure': True}" \
+    --ServerApp.disable_check_xsrf=True \
+    --LabApp.news_url=None \
+    --LabApp.check_for_updates_class="jupyterlab.NeverCheckForUpdate"